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The map label for this gene is ymfB [H]

Identifier: 16764590

GI number: 16764590

Start: 1322749

End: 1323210

Strand: Reverse

Name: ymfB [H]

Synonym: STM1235

Alternate gene names: 16764590

Gene position: 1323210-1322749 (Counterclockwise)

Preceding gene: 16764591

Following gene: 39546313

Centisome position: 27.24

GC content: 51.95

Gene sequence:

>462_bases
ATGTTCAAGCCGCACGTGACCGTTGCCTGCATCGTACATGCCGAAGATAAATTTCTGGTGGTAGAAGAGACCATCAACGG
TAAATCGTTATGGAATCAACCTGCCGGACACCTGGAGGCAGATGAAACGCTGGCGCAGGCCGCCGCGCGTGAACTGTGGG
AAGAGACTGGCATCACGGCGCAACCACAGTATTTTATCCGTATGCATCAGTGGATTGCGCCGGATAAAACCCCGTTCCTG
CGCTTTTTATTCGCTATCAAGCTTGATCATATTTGCGCGACCGACCCCCATGACAATGACATCGATTGCTGCCGTTGGGT
GAGCGCCGACGAGATTCTGAACGCGCCGAATTTACGTTCTCCGCTGGTGGCTGAAAGCGTTCGCAGTTATCAAACGGGAC
AACGTTACCCCTTATCTATAGTGGGCGAATTTAACTGGCCGTTTACAGAGGGTGTCAAGTAA

Upstream 100 bases:

>100_bases
AGGCCGACGTCACCTGCCTGACAAAAGCTTATAACGAGCGTCTGAAACAGCTTGACGTGATCTATGACCACATTGATAAA
CCGCTTTAATAAGGATGCCT

Downstream 100 bases:

>100_bases
AGGGCTGCGTGATAGAATACGCCGCCTTGAAGTTCAATGTCGCGAGTATTCCAATGTCAGAAAGCCCAAAAAAAGTGATC
GTCGGCATGTCCGGCGGTGT

Product: MutT-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MFKPHVTVACIVHAEDKFLVVEETINGKSLWNQPAGHLEADETLAQAAARELWEETGITAQPQYFIRMHQWIAPDKTPFL
RFLFAIKLDHICATDPHDNDIDCCRWVSADEILNAPNLRSPLVAESVRSYQTGQRYPLSIVGEFNWPFTEGVK

Sequences:

>Translated_153_residues
MFKPHVTVACIVHAEDKFLVVEETINGKSLWNQPAGHLEADETLAQAAARELWEETGITAQPQYFIRMHQWIAPDKTPFL
RFLFAIKLDHICATDPHDNDIDCCRWVSADEILNAPNLRSPLVAESVRSYQTGQRYPLSIVGEFNWPFTEGVK
>Mature_153_residues
MFKPHVTVACIVHAEDKFLVVEETINGKSLWNQPAGHLEADETLAQAAARELWEETGITAQPQYFIRMHQWIAPDKTPFL
RFLFAIKLDHICATDPHDNDIDCCRWVSADEILNAPNLRSPLVAESVRSYQTGQRYPLSIVGEFNWPFTEGVK

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1787379, Length=152, Percent_Identity=84.2105263157895, Blast_Score=281, Evalue=1e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.-.- [C]

Molecular weight: Translated: 17436; Mature: 17436

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKPHVTVACIVHAEDKFLVVEETINGKSLWNQPAGHLEADETLAQAAARELWEETGITA
CCCCCEEEEEEEECCCCEEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
QPQYFIRMHQWIAPDKTPFLRFLFAIKLDHICATDPHDNDIDCCRWVSADEILNAPNLRS
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHCCCCCCC
PLVAESVRSYQTGQRYPLSIVGEFNWPFTEGVK
CHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MFKPHVTVACIVHAEDKFLVVEETINGKSLWNQPAGHLEADETLAQAAARELWEETGITA
CCCCCEEEEEEEECCCCEEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
QPQYFIRMHQWIAPDKTPFLRFLFAIKLDHICATDPHDNDIDCCRWVSADEILNAPNLRS
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHCCCCCCC
PLVAESVRSYQTGQRYPLSIVGEFNWPFTEGVK
CHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA