Click here to switch to the map view.

The map label for this gene is msyB [H]

Identifier: 16764509

GI number: 16764509

Start: 1240791

End: 1241165

Strand: Reverse

Name: msyB [H]

Synonym: STM1153

Alternate gene names: 16764509

Gene position: 1241165-1240791 (Counterclockwise)

Preceding gene: 16764510

Following gene: 16764505

Centisome position: 25.55

GC content: 52.27

Gene sequence:

>375_bases
ATGACCATGTATGCCACGCTGGAAGAAGCTATCGATGCAGCCCGGGAAGAATTTCTGGCTGACCATCCAGGCCTCGAACA
AGACGAAGCGAATGTGCAGCAGTTCAACGTTCAGAAATATGTACTGCAGGATGGGGACATCATGTGGCAGGTCGAATTTT
TCGCCGATGAAGGTGAAGATGGCGAATGTCTGCCGATGCTGAGTGGTGAAGCCGCGCAGAGCGTGTTTGACGGCGATTAT
GATGAGATAGAGATCCGCCAGGAGTGGCAGGAAGAGAATACTTTGCATGAATGGGATGAAGGGGAATTCCAGCTTGAACC
CCCGCTTGATACCGAGGAAGGCCGTACTGCGGCAGACGAATGGGATGAGCGTTAA

Upstream 100 bases:

>100_bases
CAGACTGGCAATAGAATAATTTTTGCGCTTTCATACTTGCAATATTACAGAATCAGCTATTCTTTCCCTAAATACCTCAT
CAAATCAAAGGGAGACACTG

Downstream 100 bases:

>100_bases
TTACTCATAAGGCCCGTGGTGAATATCGAGCGGCAGTAGCAGTGTATCGAAGATCAGTGAGAAGGGCAGATCGAGGATAG
TGATATAGCGCCATGCGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MTMYATLEEAIDAAREEFLADHPGLEQDEANVQQFNVQKYVLQDGDIMWQVEFFADEGEDGECLPMLSGEAAQSVFDGDY
DEIEIRQEWQEENTLHEWDEGEFQLEPPLDTEEGRTAADEWDER

Sequences:

>Translated_124_residues
MTMYATLEEAIDAAREEFLADHPGLEQDEANVQQFNVQKYVLQDGDIMWQVEFFADEGEDGECLPMLSGEAAQSVFDGDY
DEIEIRQEWQEENTLHEWDEGEFQLEPPLDTEEGRTAADEWDER
>Mature_123_residues
TMYATLEEAIDAAREEFLADHPGLEQDEANVQQFNVQKYVLQDGDIMWQVEFFADEGEDGECLPMLSGEAAQSVFDGDYD
EIEIRQEWQEENTLHEWDEGEFQLEPPLDTEEGRTAADEWDER

Specific function: Could participate in the normal pathway of protein export [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081827, Length=124, Percent_Identity=92.741935483871, Blast_Score=234, Evalue=1e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14397; Mature: 14266

Theoretical pI: Translated: 3.42; Mature: 3.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMYATLEEAIDAAREEFLADHPGLEQDEANVQQFNVQKYVLQDGDIMWQVEFFADEGED
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEECCCCEEEEEEEEECCCCC
GECLPMLSGEAAQSVFDGDYDEIEIRQEWQEENTLHEWDEGEFQLEPPLDTEEGRTAADE
CCEECCCCCHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCC
WDER
CCCC
>Mature Secondary Structure 
TMYATLEEAIDAAREEFLADHPGLEQDEANVQQFNVQKYVLQDGDIMWQVEFFADEGED
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEECCCCEEEEEEEEECCCCC
GECLPMLSGEAAQSVFDGDYDEIEIRQEWQEENTLHEWDEGEFQLEPPLDTEEGRTAADE
CCEECCCCCHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCC
WDER
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1537791; 8905232; 9278503 [H]