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The map label for this gene is yfeT [C]

Identifier: 16764484

GI number: 16764484

Start: 1215275

End: 1216156

Strand: Reverse

Name: yfeT [C]

Synonym: STM1127

Alternate gene names: 16764484

Gene position: 1216156-1215275 (Counterclockwise)

Preceding gene: 16764485

Following gene: 16764480

Centisome position: 25.04

GC content: 49.21

Gene sequence:

>882_bases
ATGGAGCCTCAACCCCCACGTCTTAAACCCGGAAAAATCCTTGATACTCTGGGTGCTATGCAAAAAAGCCTGACACGTGC
CTCCCAGCGTATTGCGCAATATATTTTAGCCTTCCCCAGACAGGTGACACAGTCATCTATTGCCGATTTGTCGCGCGAAA
CACAGGCCGGAGAAGCCACGGTTATTCGCTTTTGTCGCACCCTGGGCTATAAAGGTTTTCAGGATTTTAAAATGGACCTG
GCCATTGAACTTGCCACTACCGAGTCTGATGACAGTAGTCCTCTACTGGATGCCGAAGTTAGCGAATCCGACGATGCCCA
CGCCATTGGTTTAAAATTGCAGAACACCATTAGTAATGTATTATCTGAAACGCTAAATCTGCTTGATATGCAACAGGTTC
TCGGTGTCGTGGATGCCCTACGTCACTGTCACTCAGTTTATATCTTTGGTGTGGGCTCATCGGGGATCACGGCGCTGGAT
ATGAAACACAAGCTAATGCGTATTGGTTTACGGGGCGATGCGGTAAGCAATAACCATTTTATGTACATGCAGGCTACGCT
ATTAAAAGCAGGCGATGTCGCGATGGGTGTCAGTCACTCGGGCACATCGCCAGAAACAGTGCATTCACTCCGATTGGCCC
GACAGGCTGGCGCCACCACAGTCGCCATTACCCATAATCTGGGTTCTCCATTATGTGAAGAGGCCGATTTTTGCCTGATC
AATGGTAATCGGCAAGGAATGTTGCAGGGTGACTCGATCGGTACGAAAGCCGCGCAGCTTTTCGTCTTTGACCTGCTCTA
TACCCTTCTTGTACAGTCCTCGCCGGAACAGGCCCGAGAAAGCAAATTACGGACAATGAATGCCCTGGACATGACAAAAT
AA

Upstream 100 bases:

>100_bases
CTTACATCGCGCTTTTTTTCATGCCGCAGACTTGATAGGCTCTGCTCTGTTCGATATTGCAGGCTTTGTGCCGCAATCAG
CCCTCAAGAGCAGGAACTAT

Downstream 100 bases:

>100_bases
TTCCCTTCACGTACAGGCGTCATTTTCCTTTTTTGTCCATGAGTCTGCTGGATGCTTTATAGATAACAAAGCCCGGTTTC
CCGGGCTCTGAAAGTCAATG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MEPQPPRLKPGKILDTLGAMQKSLTRASQRIAQYILAFPRQVTQSSIADLSRETQAGEATVIRFCRTLGYKGFQDFKMDL
AIELATTESDDSSPLLDAEVSESDDAHAIGLKLQNTISNVLSETLNLLDMQQVLGVVDALRHCHSVYIFGVGSSGITALD
MKHKLMRIGLRGDAVSNNHFMYMQATLLKAGDVAMGVSHSGTSPETVHSLRLARQAGATTVAITHNLGSPLCEEADFCLI
NGNRQGMLQGDSIGTKAAQLFVFDLLYTLLVQSSPEQARESKLRTMNALDMTK

Sequences:

>Translated_293_residues
MEPQPPRLKPGKILDTLGAMQKSLTRASQRIAQYILAFPRQVTQSSIADLSRETQAGEATVIRFCRTLGYKGFQDFKMDL
AIELATTESDDSSPLLDAEVSESDDAHAIGLKLQNTISNVLSETLNLLDMQQVLGVVDALRHCHSVYIFGVGSSGITALD
MKHKLMRIGLRGDAVSNNHFMYMQATLLKAGDVAMGVSHSGTSPETVHSLRLARQAGATTVAITHNLGSPLCEEADFCLI
NGNRQGMLQGDSIGTKAAQLFVFDLLYTLLVQSSPEQARESKLRTMNALDMTK
>Mature_293_residues
MEPQPPRLKPGKILDTLGAMQKSLTRASQRIAQYILAFPRQVTQSSIADLSRETQAGEATVIRFCRTLGYKGFQDFKMDL
AIELATTESDDSSPLLDAEVSESDDAHAIGLKLQNTISNVLSETLNLLDMQQVLGVVDALRHCHSVYIFGVGSSGITALD
MKHKLMRIGLRGDAVSNNHFMYMQATLLKAGDVAMGVSHSGTSPETVHSLRLARQAGATTVAITHNLGSPLCEEADFCLI
NGNRQGMLQGDSIGTKAAQLFVFDLLYTLLVQSSPEQARESKLRTMNALDMTK

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1788767, Length=251, Percent_Identity=29.4820717131474, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI87082369, Length=278, Percent_Identity=26.2589928057554, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1788159, Length=277, Percent_Identity=28.158844765343, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI87082130, Length=265, Percent_Identity=26.4150943396226, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 31856; Mature: 31856

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPQPPRLKPGKILDTLGAMQKSLTRASQRIAQYILAFPRQVTQSSIADLSRETQAGEAT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VIRFCRTLGYKGFQDFKMDLAIELATTESDDSSPLLDAEVSESDDAHAIGLKLQNTISNV
HHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHH
LSETLNLLDMQQVLGVVDALRHCHSVYIFGVGSSGITALDMKHKLMRIGLRGDAVSNNHF
HHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEECCCEE
MYMQATLLKAGDVAMGVSHSGTSPETVHSLRLARQAGATTVAITHNLGSPLCEEADFCLI
EEEEEEHHCCCCEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEE
NGNRQGMLQGDSIGTKAAQLFVFDLLYTLLVQSSPEQARESKLRTMNALDMTK
ECCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEPQPPRLKPGKILDTLGAMQKSLTRASQRIAQYILAFPRQVTQSSIADLSRETQAGEAT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VIRFCRTLGYKGFQDFKMDLAIELATTESDDSSPLLDAEVSESDDAHAIGLKLQNTISNV
HHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHH
LSETLNLLDMQQVLGVVDALRHCHSVYIFGVGSSGITALDMKHKLMRIGLRGDAVSNNHF
HHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEECCCEE
MYMQATLLKAGDVAMGVSHSGTSPETVHSLRLARQAGATTVAITHNLGSPLCEEADFCLI
EEEEEEHHCCCCEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEE
NGNRQGMLQGDSIGTKAAQLFVFDLLYTLLVQSSPEQARESKLRTMNALDMTK
ECCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]