| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is hpaH [H]
Identifier: 16764463
GI number: 16764463
Start: 1192359
End: 1193162
Strand: Direct
Name: hpaH [H]
Synonym: STM1105
Alternate gene names: 16764463
Gene position: 1192359-1193162 (Clockwise)
Preceding gene: 16764462
Following gene: 16764464
Centisome position: 24.55
GC content: 59.08
Gene sequence:
>804_bases ATGCTCGATAAACAGACCCATACCCTGATCGCCCAGCGACTTAATCAGGCTGAAAAACAGCGCGAACAGATTCGCGCAGT GTCGCTGGATTATCCCAACATCACTATTGAAGATGCCTATGCCGTACAGCGTGAATGGGTCAATATCAAGATTGCCGAAG GGCGCACGCTCAAAGGCCACAAAATCGGCCTGACCTCAAAAGCGATGCAGGCCAGCTCGCAAATCAGCGAACCGGATTAC GGCGCGCTGCTTGACGATATGTTCTTCCATGACGGCGGCGATATCCCCACCGACCGTTTTATCGTCCCGCGTATTGAAGT GGAGCTGGCGTTCGTGCTGGCGAAACCGCTGCGCGGCCCTCACTGCACGCTGTTCGACGTCTACAACGCCACGGATTATG TGATTCCGGCGCTGGAACTGATTGACGCCCGCAGCCACAACATCGACCCGGAAACCCAGCGTCCGCGCAAAGTGTTCGAC ACCATTTCCGACAACGCCGCCAACGCCGGGGTGATCCTCGGTGGTCGTCCCATCAAACCAGACGAGCTGGATCTGCGCTG GATCTCCGCGCTGCTCTATCGCAACGGCGTGATCGAAGAAACCGGCGTCGCCGCAGGCGTGCTGAATCATCCGGCCAACG GCGTGGCGTGGCTGGCGAACAAGCTTGCCCCCTACGATGTCCAGCTTGAAGCCGGGCAGATCATCCTCGGCGGCTCGTTC ACCCGCCCGGTGCCGGCGCGCAAGGGCGACACCTTCCATGTCGATTACGGCAACATGGGCGCGATCAGTTGCCGGTTTGT GTAA
Upstream 100 bases:
>100_bases AAAAAACGATGCACGAAGCAATACCGAACCGTAGGCCGGGTAAGACGCACCCGCGTCGCCACCCGGCACAGCAGCACCGA ATGACGTAACAGGAAACACT
Downstream 100 bases:
>100_bases GGAAAAAACGATGAAAAATGCTTTCAAAGACGCGTTAAAAGCGGGGCGTCCGCAAATCGGTTTGTGGCTGGGGCTTGCCA ACAGTTACAGCGCTGAACTG
Product: 4-hydroxyphenylacetate catabolism
Products: NA
Alternate protein names: OHED hydratase [H]
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MLDKQTHTLIAQRLNQAEKQREQIRAVSLDYPNITIEDAYAVQREWVNIKIAEGRTLKGHKIGLTSKAMQASSQISEPDY GALLDDMFFHDGGDIPTDRFIVPRIEVELAFVLAKPLRGPHCTLFDVYNATDYVIPALELIDARSHNIDPETQRPRKVFD TISDNAANAGVILGGRPIKPDELDLRWISALLYRNGVIEETGVAAGVLNHPANGVAWLANKLAPYDVQLEAGQIILGGSF TRPVPARKGDTFHVDYGNMGAISCRFV
Sequences:
>Translated_267_residues MLDKQTHTLIAQRLNQAEKQREQIRAVSLDYPNITIEDAYAVQREWVNIKIAEGRTLKGHKIGLTSKAMQASSQISEPDY GALLDDMFFHDGGDIPTDRFIVPRIEVELAFVLAKPLRGPHCTLFDVYNATDYVIPALELIDARSHNIDPETQRPRKVFD TISDNAANAGVILGGRPIKPDELDLRWISALLYRNGVIEETGVAAGVLNHPANGVAWLANKLAPYDVQLEAGQIILGGSF TRPVPARKGDTFHVDYGNMGAISCRFV >Mature_267_residues MLDKQTHTLIAQRLNQAEKQREQIRAVSLDYPNITIEDAYAVQREWVNIKIAEGRTLKGHKIGLTSKAMQASSQISEPDY GALLDDMFFHDGGDIPTDRFIVPRIEVELAFVLAKPLRGPHCTLFDVYNATDYVIPALELIDARSHNIDPETQRPRKVFD TISDNAANAGVILGGRPIKPDELDLRWISALLYRNGVIEETGVAAGVLNHPANGVAWLANKLAPYDVQLEAGQIILGGSF TRPVPARKGDTFHVDYGNMGAISCRFV
Specific function: Transforms 2-oxo-hept-3-ene-1,7-dioate (OHED) into 2,4- dihydoxy-hept-2-ene-1,7-dioic acid (HHED) [H]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hydratase/decarboxylase family [H]
Homologues:
Organism=Escherichia coli, GI87081722, Length=266, Percent_Identity=33.4586466165414, Blast_Score=141, Evalue=4e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 - InterPro: IPR012690 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: 4.2.1.-
Molecular weight: Translated: 29543; Mature: 29543
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDKQTHTLIAQRLNQAEKQREQIRAVSLDYPNITIEDAYAVQREWVNIKIAEGRTLKGH CCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEECCHHHEEEEEEEEEEECCCEECCC KIGLTSKAMQASSQISEPDYGALLDDMFFHDGGDIPTDRFIVPRIEVELAFVLAKPLRGP EECCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEECEEHEEEEEEECCCCCCC HCTLFDVYNATDYVIPALELIDARSHNIDPETQRPRKVFDTISDNAANAGVILGGRPIKP CEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCC DELDLRWISALLYRNGVIEETGVAAGVLNHPANGVAWLANKLAPYDVQLEAGQIILGGSF CCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHCCCCCEEEEECCEEEECCCC TRPVPARKGDTFHVDYGNMGAISCRFV CCCCCCCCCCEEEEECCCCCEEEEEEC >Mature Secondary Structure MLDKQTHTLIAQRLNQAEKQREQIRAVSLDYPNITIEDAYAVQREWVNIKIAEGRTLKGH CCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEECCHHHEEEEEEEEEEECCCEECCC KIGLTSKAMQASSQISEPDYGALLDDMFFHDGGDIPTDRFIVPRIEVELAFVLAKPLRGP EECCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEECEEHEEEEEEECCCCCCC HCTLFDVYNATDYVIPALELIDARSHNIDPETQRPRKVFDTISDNAANAGVILGGRPIKP CEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCC DELDLRWISALLYRNGVIEETGVAAGVLNHPANGVAWLANKLAPYDVQLEAGQIILGGSF CCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHCCCCCEEEEECCEEEECCCC TRPVPARKGDTFHVDYGNMGAISCRFV CCCCCCCCCCEEEEECCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7737515 [H]