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The map label for this gene is yccT [H]

Identifier: 16764436

GI number: 16764436

Start: 1169077

End: 1169739

Strand: Reverse

Name: yccT [H]

Synonym: STM1077

Alternate gene names: 16764436

Gene position: 1169739-1169077 (Counterclockwise)

Preceding gene: 16764438

Following gene: 16764435

Centisome position: 24.08

GC content: 52.94

Gene sequence:

>663_bases
ATGAAAACCGGCGCGCTAGCCACCTTCCTTGCTCTCTGTTTGCCGGTGACTGTTTTTGCCACAACGCTCCGTTTGTCTAA
TGAGGTTGATCTGCTGGTGCTGGACGGCAAAAAGGTGTCCAGCTCTTTATTACGCGGCGCAGAGAGCATTGAACTGGAAA
ACGGGCCGCATCAACTCGTTTTCCGGGTGGAAAAAACCATCCGCCTGCCCGGTAATGAAGAGCGGCTTTATATTTCTCCG
CCGCTGGTGATAAGTTTCGATACCCAACTGATAAGTCAGGTCAATTTCCAGCTCCCGCGGCTGGAAAACGAGCGCGAAGC
CTCGCATTTTAACGCGGCGCCGCGTCTGGCGCTTTTGGACGGCGACGCCATGCCCATTCCGGTAAAACTCGATATTCTGG
CCATTACTTCTACGGCTAAAGTGGTCGATTATGAAATAGAGACCGAGCGTTATAATAAATCGGCGAAACGCGCCTCGCTT
CCTCAGTTCGCCACGATGATGGCAGACGACAGCACATTACTTTCCGACGTCTCAGAGCTTGATACCGTACCGCCGCAATC
ACAAACTCTGACAGAACAGCGGCTGAAATATTGGTTCCGACTGGCCGACCCGCAGACACGCCATCATTTTCTGCAATGGG
CGGAAAAACAGCCGCCCTCTTGA

Upstream 100 bases:

>100_bases
TGAGAGCAAAACGCCAAAATATGTCTATATGTTAGTAAACATGATCTAAGAAAAATTTCGATACATTATTAGCCAGACGG
CCTTTGGACAGGAGAACCTT

Downstream 100 bases:

>100_bases
TATGAGTTGTCCCAGCGCGCAATTTTTTTCTCTTTCTCTTGCAGCATCAAGCGCTTCCAGTAATCTGTAGACAGGTTAAC
TACGGAATCGAATTATGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKTGALATFLALCLPVTVFATTLRLSNEVDLLVLDGKKVSSSLLRGAESIELENGPHQLVFRVEKTIRLPGNEERLYISP
PLVISFDTQLISQVNFQLPRLENEREASHFNAAPRLALLDGDAMPIPVKLDILAITSTAKVVDYEIETERYNKSAKRASL
PQFATMMADDSTLLSDVSELDTVPPQSQTLTEQRLKYWFRLADPQTRHHFLQWAEKQPPS

Sequences:

>Translated_220_residues
MKTGALATFLALCLPVTVFATTLRLSNEVDLLVLDGKKVSSSLLRGAESIELENGPHQLVFRVEKTIRLPGNEERLYISP
PLVISFDTQLISQVNFQLPRLENEREASHFNAAPRLALLDGDAMPIPVKLDILAITSTAKVVDYEIETERYNKSAKRASL
PQFATMMADDSTLLSDVSELDTVPPQSQTLTEQRLKYWFRLADPQTRHHFLQWAEKQPPS
>Mature_220_residues
MKTGALATFLALCLPVTVFATTLRLSNEVDLLVLDGKKVSSSLLRGAESIELENGPHQLVFRVEKTIRLPGNEERLYISP
PLVISFDTQLISQVNFQLPRLENEREASHFNAAPRLALLDGDAMPIPVKLDILAITSTAKVVDYEIETERYNKSAKRASL
PQFATMMADDSTLLSDVSELDTVPPQSQTLTEQRLKYWFRLADPQTRHHFLQWAEKQPPS

Specific function: Unknown

COG id: COG3110

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0319 family [H]

Homologues:

Organism=Escherichia coli, GI1787198, Length=220, Percent_Identity=84.5454545454545, Blast_Score=388, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018635 [H]

Pfam domain/function: PF09829 DUF2057 [H]

EC number: NA

Molecular weight: Translated: 24716; Mature: 24716

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTGALATFLALCLPVTVFATTLRLSNEVDLLVLDGKKVSSSLLRGAESIELENGPHQLV
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCEEECCCCCEEE
FRVEKTIRLPGNEERLYISPPLVISFDTQLISQVNFQLPRLENEREASHFNAAPRLALLD
EEEEHEEECCCCCCEEEECCCEEEEECHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEEEC
GDAMPIPVKLDILAITSTAKVVDYEIETERYNKSAKRASLPQFATMMADDSTLLSDVSEL
CCCCCCEEEEEEEEEECCCEEEEEEECHHHHCCHHHHCCCCHHHHHHCCCHHHHHHHHHH
DTVPPQSQTLTEQRLKYWFRLADPQTRHHFLQWAEKQPPS
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKTGALATFLALCLPVTVFATTLRLSNEVDLLVLDGKKVSSSLLRGAESIELENGPHQLV
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCEEECCCCCEEE
FRVEKTIRLPGNEERLYISPPLVISFDTQLISQVNFQLPRLENEREASHFNAAPRLALLD
EEEEHEEECCCCCCEEEECCCEEEEECHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEEEC
GDAMPIPVKLDILAITSTAKVVDYEIETERYNKSAKRASLPQFATMMADDSTLLSDVSEL
CCCCCCEEEEEEEEEECCCEEEEEEECHHHHCCHHHHCCCCHHHHHHCCCHHHHHHHHHH
DTVPPQSQTLTEQRLKYWFRLADPQTRHHFLQWAEKQPPS
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA