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The map label for this gene is ycbX [H]

Identifier: 16764419

GI number: 16764419

Start: 1148676

End: 1149785

Strand: Reverse

Name: ycbX [H]

Synonym: STM1060

Alternate gene names: 16764419

Gene position: 1149785-1148676 (Counterclockwise)

Preceding gene: 16764426

Following gene: 16764415

Centisome position: 23.67

GC content: 55.41

Gene sequence:

>1110_bases
GTGGCGACGTTATCACGGCTCTTTATTCATCCGGTCAAATCCATGCGCGGCATTGGCCTGACTCATGCGCTGGCAGATAT
CAGCGGCCTGGCTTTTGATCGCATCTTCATGGTGACCGAGCCTGACGGCACATTTATTACCGCCCGCCAGTTTCCACAAA
TGGTACGTTTTACCCCCTCTCCCTTACACGACGGCCTTCATTTGACCGCGCCAGACGGCAGTAGCGCGCTGGTTCGCTTT
ACGGATTTCACCCCGCAGGATGCGCCGACCGAGGTCTGGGGAAACCATTTTACCGCTCGCGTCGCCCCGACGGCGATTAA
TCAATGGTTGAGCGGCTTTTTCTCCCGCGATGTCCAGTTGCGCTGGGTTGGGCCGCAGTTGACACGCCGGGTCAAACGAC
ATAACGCGGTGCCGCTGGGATTTGCCGATGGCTACCCGTATTTATTGACCAACGAAGCCTCGCTGCGCGATCTGCAACAG
CGTTGTCCGGCAGGCGTACAAATGGAACAATTTCGCCCAAACTTAGTGGTTTCCGGCGTAGCGGCCTGGGAGGAAGATAG
CTGGAAAGTGCTTCGCATTGGCGATGTGATTTTTGACGTCGTGAAGCCCTGTAGCCGCTGTATTTTTACGACCGTCAGCC
CTGAAAAGGGGCAAAAACATCCTTCCGGAGAACCGCTGGCGACACTGCAAGCTTTTCGTACCGCCCTGGACAATGGCGAT
GTGGATTTCGGTCAGAATCTGATTGCCCGCAATAGCGGCGTCATTCGCGTCGGCGATGAGGTGGAGATTCTGGCGACAGC
CCCGGCAAAAGCTTATGGCGCCACAACGGTCGACAACAGCGTTACGCCAGAGAAACACCCGGACGCGAGTGTAACCATCG
ACTGGCAGGGGCAAACCTTCTGCGGGAATAATCAACAGGTACTACTGGAACAGTTGGAGAATCAGGGGATTCGTATTCCG
TATTCTTGCCGGGCTGGTATCTGTGGTTGCTGCCGGATACGTTTGCTGGAAGGCGAAGTAAGTCCGCTGAAAAAATCGGC
TATGGGTGACGATGGTACGATTCTGAGCTGTAGCTGCGTGCCTAAGACCGCGTTACGACTGGAAAATTAA

Upstream 100 bases:

>100_bases
ATATTGTCACTTTTACGCTAAGAAAATTGTTGCGCATTATAGCTAATCTCACGCCCATGTCATAAAGTTGAAGGCTTATT
TTCATTTGAGGGACTGTACG

Downstream 100 bases:

>100_bases
ACCGCTTGTTCAAGGCTGAAACTGTGACAGTGAACCTGCGGTTTCAGCCTGTCGTTCATAATTTTAATCGCATCGCCAAG
CTGCATGGTTCGGCCTGCTA

Product: iron-sulfur protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MATLSRLFIHPVKSMRGIGLTHALADISGLAFDRIFMVTEPDGTFITARQFPQMVRFTPSPLHDGLHLTAPDGSSALVRF
TDFTPQDAPTEVWGNHFTARVAPTAINQWLSGFFSRDVQLRWVGPQLTRRVKRHNAVPLGFADGYPYLLTNEASLRDLQQ
RCPAGVQMEQFRPNLVVSGVAAWEEDSWKVLRIGDVIFDVVKPCSRCIFTTVSPEKGQKHPSGEPLATLQAFRTALDNGD
VDFGQNLIARNSGVIRVGDEVEILATAPAKAYGATTVDNSVTPEKHPDASVTIDWQGQTFCGNNQQVLLEQLENQGIRIP
YSCRAGICGCCRIRLLEGEVSPLKKSAMGDDGTILSCSCVPKTALRLEN

Sequences:

>Translated_369_residues
MATLSRLFIHPVKSMRGIGLTHALADISGLAFDRIFMVTEPDGTFITARQFPQMVRFTPSPLHDGLHLTAPDGSSALVRF
TDFTPQDAPTEVWGNHFTARVAPTAINQWLSGFFSRDVQLRWVGPQLTRRVKRHNAVPLGFADGYPYLLTNEASLRDLQQ
RCPAGVQMEQFRPNLVVSGVAAWEEDSWKVLRIGDVIFDVVKPCSRCIFTTVSPEKGQKHPSGEPLATLQAFRTALDNGD
VDFGQNLIARNSGVIRVGDEVEILATAPAKAYGATTVDNSVTPEKHPDASVTIDWQGQTFCGNNQQVLLEQLENQGIRIP
YSCRAGICGCCRIRLLEGEVSPLKKSAMGDDGTILSCSCVPKTALRLEN
>Mature_368_residues
ATLSRLFIHPVKSMRGIGLTHALADISGLAFDRIFMVTEPDGTFITARQFPQMVRFTPSPLHDGLHLTAPDGSSALVRFT
DFTPQDAPTEVWGNHFTARVAPTAINQWLSGFFSRDVQLRWVGPQLTRRVKRHNAVPLGFADGYPYLLTNEASLRDLQQR
CPAGVQMEQFRPNLVVSGVAAWEEDSWKVLRIGDVIFDVVKPCSRCIFTTVSPEKGQKHPSGEPLATLQAFRTALDNGDV
DFGQNLIARNSGVIRVGDEVEILATAPAKAYGATTVDNSVTPEKHPDASVTIDWQGQTFCGNNQQVLLEQLENQGIRIPY
SCRAGICGCCRIRLLEGEVSPLKKSAMGDDGTILSCSCVPKTALRLEN

Specific function: Unknown

COG id: COG3217

COG function: function code R; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Homo sapiens, GI224600454, Length=283, Percent_Identity=34.2756183745583, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI31542713, Length=285, Percent_Identity=30.1754385964912, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI157388923, Length=241, Percent_Identity=22.4066390041494, Blast_Score=73, Evalue=3e-13,
Organism=Escherichia coli, GI1787179, Length=367, Percent_Identity=86.3760217983651, Blast_Score=674, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17540702, Length=284, Percent_Identity=29.9295774647887, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17561286, Length=256, Percent_Identity=29.296875, Blast_Score=104, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI71990971, Length=264, Percent_Identity=28.4090909090909, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI25147498, Length=246, Percent_Identity=26.8292682926829, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI45550400, Length=289, Percent_Identity=27.3356401384083, Blast_Score=95, Evalue=9e-20,
Organism=Drosophila melanogaster, GI17647607, Length=256, Percent_Identity=26.171875, Blast_Score=75, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR005302
- InterPro:   IPR005303
- InterPro:   IPR011037 [H]

Pfam domain/function: PF00111 Fer2; PF03473 MOSC; PF03476 MOSC_N [H]

EC number: NA

Molecular weight: Translated: 40492; Mature: 40360

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLSRLFIHPVKSMRGIGLTHALADISGLAFDRIFMVTEPDGTFITARQFPQMVRFTPS
CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEEECCCCCEEEHHHCCHHHHCCCC
PLHDGLHLTAPDGSSALVRFTDFTPQDAPTEVWGNHFTARVAPTAINQWLSGFFSRDVQL
CCCCCCEEECCCCCCEEEEEECCCCCCCCHHHHCCCEEEEECHHHHHHHHHHHHCCCCEE
RWVGPQLTRRVKRHNAVPLGFADGYPYLLTNEASLRDLQQRCPAGVQMEQFRPNLVVSGV
EEECHHHHHHHHHCCCCEEEECCCCCEEEECCHHHHHHHHHCCCCCCHHHCCCCEEEEEE
AAWEEDSWKVLRIGDVIFDVVKPCSRCIFTTVSPEKGQKHPSGEPLATLQAFRTALDNGD
EECCCCCEEEEEHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCC
VDFGQNLIARNSGVIRVGDEVEILATAPAKAYGATTVDNSVTPEKHPDASVTIDWQGQTF
CCCCCHHHHCCCCEEEECCCEEEEEECCCHHCCCCCCCCCCCCCCCCCCEEEEEECCCEE
CGNNQQVLLEQLENQGIRIPYSCRAGICGCCRIRLLEGEVSPLKKSAMGDDGTILSCSCV
ECCCHHHHHHHHHCCCEEEEHHCCCCCCEEEEEEEECCCCCHHHHHCCCCCCCEEEEECC
PKTALRLEN
CCCHHCCCC
>Mature Secondary Structure 
ATLSRLFIHPVKSMRGIGLTHALADISGLAFDRIFMVTEPDGTFITARQFPQMVRFTPS
CCHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEEECCCCCEEEHHHCCHHHHCCCC
PLHDGLHLTAPDGSSALVRFTDFTPQDAPTEVWGNHFTARVAPTAINQWLSGFFSRDVQL
CCCCCCEEECCCCCCEEEEEECCCCCCCCHHHHCCCEEEEECHHHHHHHHHHHHCCCCEE
RWVGPQLTRRVKRHNAVPLGFADGYPYLLTNEASLRDLQQRCPAGVQMEQFRPNLVVSGV
EEECHHHHHHHHHCCCCEEEECCCCCEEEECCHHHHHHHHHCCCCCCHHHCCCCEEEEEE
AAWEEDSWKVLRIGDVIFDVVKPCSRCIFTTVSPEKGQKHPSGEPLATLQAFRTALDNGD
EECCCCCEEEEEHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCC
VDFGQNLIARNSGVIRVGDEVEILATAPAKAYGATTVDNSVTPEKHPDASVTIDWQGQTF
CCCCCHHHHCCCCEEEECCCEEEEEECCCHHCCCCCCCCCCCCCCCCCCEEEEEECCCEE
CGNNQQVLLEQLENQGIRIPYSCRAGICGCCRIRLLEGEVSPLKKSAMGDDGTILSCSCV
ECCCHHHHHHHHHCCCEEEEHHCCCCCCEEEEEEEECCCCCHHHHHCCCCCCCEEEEECC
PKTALRLEN
CCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]