| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is ycaI [H]
Identifier: 16764343
GI number: 16764343
Start: 1068134
End: 1070398
Strand: Direct
Name: ycaI [H]
Synonym: STM0983
Alternate gene names: 16764343
Gene position: 1068134-1070398 (Clockwise)
Preceding gene: 16764342
Following gene: 16764344
Centisome position: 21.99
GC content: 55.32
Gene sequence:
>2265_bases ATGAAGATAACGACGGTCAGCGTATGCGTAGTATGCGGCATACTTCCACTCATGATATTGCCAGTATTACCTGATACGTG GATTCTCGCGGTGCTGTTTTGTCTGGCATGTTTGCTTTGCCTCATACCCCATCACTATGCGCGCTACGCGGCATTAACTT TGCTCTTTTTCATGTGGGGGATATTTGCCGCCAGGCAGGCCATCTGGGCGGGAAACGTCCTGCCCGCCGCGACGCAGGAG GCGACAGTCGTCATTACTGCCACCGATCATATGACCACTCATTATGGGCGAATCACCCATTTGCGCGGAAAGCCGCTCTT TCCTGCTGTAGGGATTGTCCTGCATGGCCAGTACTTACCCACGGAAGTGTGTGCCGGGCAACAGTGGGCGATGACGCTGA AGGTCAGAGCGGTACACGGACAGCTTAACGAAGGCGGTTTTGATAGCCAGCGTTACGCGCTAGCGCAGCACCAACCGTTG ACCGGGCGTTTCCTACAGGCTAAAGCGATTAACCCTGAGTGTAGCTTGCGTGGGCGCTATCTTGCTTCGCTTCGCGCTAC GCTTGCGCCTTATCCGTGGCAGCAGGTTATTCTGGCGTTGGGAATGGGGGAGCGGGGAGCGGTGTCGCAGGAGGTGAAGG CCGTTATGCGCGATACGGGGACTGCCCATTTGATGGCGATTTCCGGCCTGCATATCGCTTTTGCTGCGTTATTGGCTGCC GGATTAATCCGTGGCGGACAATTCTTTTTGCCGGTCAGATGGATTCGTTGGCAGACGCCATTGCTGGGCGGCATTCTTTG CGCGATATGTTATGCCTGGCTTACCGGCTTACAACCGCCTGCGCTGCGCACGGTGGCGGCGCTGAGCGTCTGGGGAGGAT TAAAATTAAGCGGACGACAGTGGAGCGGCTGGCAAGTCTGGTGCTGCTGTCTGGCCGCGATTATTTTCGCCGATCCTGTG GCGGTTATATCACAAAGTCTTTGGCTGTCAGCATTTGCGGTTGCCGGCCTGTTATTCTGGTATCAGTGGTTTCCTGCGCC AAACGGAAATTTTCCACGAGGCTTACGCTGGTTGCTTAACCTGCTTCACCTACAGGCAGGCATTACACTTCTGCTTTTGC CTCTCCAGGTGGCGCTTTTTCATGGCATAAGCGTTACCGCAATGCTGGCGAATCTTTTTGCCGTACCCTGGGTCACATTT GTGACGGTTCCACTCATCCTGGCGGGAATGATTCTGCATTTAACCGGGCCGTTTTTTCTTGAAGAGTGGGTATGGTACCT GACCGATCGCGCGTTAGCCGCGCTATTTTACCTGTTGAATGCTTTACCGCAGGGCTGGGTCAATATTGATAACCGTTGGC AGTGGCTGACGCTTTTACCCTGGTTAACGCTTATCGCGTGGCGATTAAACGTCTGGCGTACCTGGCCGGCGGTTTGTTTA TGCGGGTTATTGTTGATGAGCTGGCCACTCTGGCGGCCGATAAACGCCAGCGGATGGCAGGTGCATATGCTGGATGTCGG TCAGGGGCTGGCGATAGCGATCGTCAGGGGCGATAAAGTAATACTCTACGATACCGGTCGGGCATGGCCGGAGGGCGACA GCGGGCAACAGGTTATTATTCCCTGGTTGCGCTGGCATAATCTGACGCCGGAGGGCGTTATTTTGAGTCATGAGCATCTG GATCATCGGGGCGGGCTGCGTTCGCTACAGCAGGTCTGGCCGTCAATGTGGATTCGCAGCCCGTTAGGCTGGCAGGGACA TTTGCCCTGTTTTCGTGGCGAGCAGTGGCAATGGCAGGGGCTAACGTTTCAGGCGCACTGGCCGTTACGCGAAAGTGCCG ATCGAGGAAATAACCGTTCTTGTGTGGTCAAAGTGGATGACGGTGTACATAGCATCCTGCTCACGGGCGATATCGAAGCG GGCGCTGAACAAAAAATGCTAAGTCGTTACTGGCGACATCTTGCGGCGACGTTTATCCAGGTGCCGCATCATGGTAGTAA TACGTCGTCGTCGCTACCATTTATTCAGCGCGTACATGGTGAAGCGGCGCTGGCGTCCGCATCGCGCTATAACGCATGGC GGCTGCCGTCCCGCAAGGTAAAACAGCGCTACCGACAGCAGGCGTATCAGTGGTTTGATACACCCCACCAGGGGCAAATT TCGCTGCGGTTTTCTCCGCAGGGCTGGCGCATACAAGGCTTACGGGATCAAATTTTACCTCGCTGGTATCATCAGTGGTT TGGCGTGTCCGAGGATAACGGGTAG
Upstream 100 bases:
>100_bases TTATCAGGTAAAAAACCTGGAATCCGCGCCGTATAGCACAAAATCCCCTCCAGACAATGGCGTCCTGAACCTGCACACTT TCCCGCACAGGGAGGTGTCT
Downstream 100 bases:
>100_bases AATATGCGGCTATTTCAACAAATGCTGGTTTTTTGAATGCATAACGATAAAGATCTCTCTACGTGGCAGACCTTCCGCCG ACTGTGGCCAACCATAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 754; Mature: 754
Protein sequence:
>754_residues MKITTVSVCVVCGILPLMILPVLPDTWILAVLFCLACLLCLIPHHYARYAALTLLFFMWGIFAARQAIWAGNVLPAATQE ATVVITATDHMTTHYGRITHLRGKPLFPAVGIVLHGQYLPTEVCAGQQWAMTLKVRAVHGQLNEGGFDSQRYALAQHQPL TGRFLQAKAINPECSLRGRYLASLRATLAPYPWQQVILALGMGERGAVSQEVKAVMRDTGTAHLMAISGLHIAFAALLAA GLIRGGQFFLPVRWIRWQTPLLGGILCAICYAWLTGLQPPALRTVAALSVWGGLKLSGRQWSGWQVWCCCLAAIIFADPV AVISQSLWLSAFAVAGLLFWYQWFPAPNGNFPRGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTF VTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLLNALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTWPAVCL CGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLTPEGVILSHEHL DHRGGLRSLQQVWPSMWIRSPLGWQGHLPCFRGEQWQWQGLTFQAHWPLRESADRGNNRSCVVKVDDGVHSILLTGDIEA GAEQKMLSRYWRHLAATFIQVPHHGSNTSSSLPFIQRVHGEAALASASRYNAWRLPSRKVKQRYRQQAYQWFDTPHQGQI SLRFSPQGWRIQGLRDQILPRWYHQWFGVSEDNG
Sequences:
>Translated_754_residues MKITTVSVCVVCGILPLMILPVLPDTWILAVLFCLACLLCLIPHHYARYAALTLLFFMWGIFAARQAIWAGNVLPAATQE ATVVITATDHMTTHYGRITHLRGKPLFPAVGIVLHGQYLPTEVCAGQQWAMTLKVRAVHGQLNEGGFDSQRYALAQHQPL TGRFLQAKAINPECSLRGRYLASLRATLAPYPWQQVILALGMGERGAVSQEVKAVMRDTGTAHLMAISGLHIAFAALLAA GLIRGGQFFLPVRWIRWQTPLLGGILCAICYAWLTGLQPPALRTVAALSVWGGLKLSGRQWSGWQVWCCCLAAIIFADPV AVISQSLWLSAFAVAGLLFWYQWFPAPNGNFPRGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTF VTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLLNALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTWPAVCL CGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLTPEGVILSHEHL DHRGGLRSLQQVWPSMWIRSPLGWQGHLPCFRGEQWQWQGLTFQAHWPLRESADRGNNRSCVVKVDDGVHSILLTGDIEA GAEQKMLSRYWRHLAATFIQVPHHGSNTSSSLPFIQRVHGEAALASASRYNAWRLPSRKVKQRYRQQAYQWFDTPHQGQI SLRFSPQGWRIQGLRDQILPRWYHQWFGVSEDNG >Mature_754_residues MKITTVSVCVVCGILPLMILPVLPDTWILAVLFCLACLLCLIPHHYARYAALTLLFFMWGIFAARQAIWAGNVLPAATQE ATVVITATDHMTTHYGRITHLRGKPLFPAVGIVLHGQYLPTEVCAGQQWAMTLKVRAVHGQLNEGGFDSQRYALAQHQPL TGRFLQAKAINPECSLRGRYLASLRATLAPYPWQQVILALGMGERGAVSQEVKAVMRDTGTAHLMAISGLHIAFAALLAA GLIRGGQFFLPVRWIRWQTPLLGGILCAICYAWLTGLQPPALRTVAALSVWGGLKLSGRQWSGWQVWCCCLAAIIFADPV AVISQSLWLSAFAVAGLLFWYQWFPAPNGNFPRGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTF VTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLLNALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTWPAVCL CGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLTPEGVILSHEHL DHRGGLRSLQQVWPSMWIRSPLGWQGHLPCFRGEQWQWQGLTFQAHWPLRESADRGNNRSCVVKVDDGVHSILLTGDIEA GAEQKMLSRYWRHLAATFIQVPHHGSNTSSSLPFIQRVHGEAALASASRYNAWRLPSRKVKQRYRQQAYQWFDTPHQGQI SLRFSPQGWRIQGLRDQILPRWYHQWFGVSEDNG
Specific function: Unknown
COG id: COG0658
COG function: function code R; Predicted membrane metal-binding protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis ComEC, N.gonorrhoeae ComA, and H.influenzae Rec2 [H]
Homologues:
Organism=Escherichia coli, GI87081801, Length=754, Percent_Identity=70.026525198939, Blast_Score=1077, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR004477 - InterPro: IPR004797 [H]
Pfam domain/function: PF03772 Competence; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 84955; Mature: 84955
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITTVSVCVVCGILPLMILPVLPDTWILAVLFCLACLLCLIPHHYARYAALTLLFFMWG CCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH IFAARQAIWAGNVLPAATQEATVVITATDHMTTHYGRITHLRGKPLFPAVGIVLHGQYLP HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHCCCEEEECCCCCCCHHHHEEECCCCC TEVCAGQQWAMTLKVRAVHGQLNEGGFDSQRYALAQHQPLTGRFLQAKAINPECSLRGRY HHHHCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCHHH LASLRATLAPYPWQQVILALGMGERGAVSQEVKAVMRDTGTAHLMAISGLHIAFAALLAA HHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH GLIRGGQFFLPVRWIRWQTPLLGGILCAICYAWLTGLQPPALRTVAALSVWGGLKLSGRQ HHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEECCCC WSGWQVWCCCLAAIIFADPVAVISQSLWLSAFAVAGLLFWYQWFPAPNGNFPRGLRWLLN CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFL HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH EEWVWYLTDRALAALFYLLNALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTWPAVCL HHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH CGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVII HHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCEEEEEECCCCCCCCCCCCEEEE PWLRWHNLTPEGVILSHEHLDHRGGLRSLQQVWPSMWIRSPLGWQGHLPCFRGEQWQWQG EHHHHCCCCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECC LTFQAHWPLRESADRGNNRSCVVKVDDGVHSILLTGDIEAGAEQKMLSRYWRHLAATFIQ EEEEECCCCHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC VPHHGSNTSSSLPFIQRVHGEAALASASRYNAWRLPSRKVKQRYRQQAYQWFDTPHQGQI CCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEE SLRFSPQGWRIQGLRDQILPRWYHQWFGVSEDNG EEEECCCCCEECCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKITTVSVCVVCGILPLMILPVLPDTWILAVLFCLACLLCLIPHHYARYAALTLLFFMWG CCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH IFAARQAIWAGNVLPAATQEATVVITATDHMTTHYGRITHLRGKPLFPAVGIVLHGQYLP HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHCCCEEEECCCCCCCHHHHEEECCCCC TEVCAGQQWAMTLKVRAVHGQLNEGGFDSQRYALAQHQPLTGRFLQAKAINPECSLRGRY HHHHCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCHHH LASLRATLAPYPWQQVILALGMGERGAVSQEVKAVMRDTGTAHLMAISGLHIAFAALLAA HHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH GLIRGGQFFLPVRWIRWQTPLLGGILCAICYAWLTGLQPPALRTVAALSVWGGLKLSGRQ HHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEECCCC WSGWQVWCCCLAAIIFADPVAVISQSLWLSAFAVAGLLFWYQWFPAPNGNFPRGLRWLLN CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFL HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH EEWVWYLTDRALAALFYLLNALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTWPAVCL HHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH CGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVII HHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCEEEEEECCCCCCCCCCCCEEEE PWLRWHNLTPEGVILSHEHLDHRGGLRSLQQVWPSMWIRSPLGWQGHLPCFRGEQWQWQG EHHHHCCCCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECC LTFQAHWPLRESADRGNNRSCVVKVDDGVHSILLTGDIEAGAEQKMLSRYWRHLAATFIQ EEEEECCCCHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC VPHHGSNTSSSLPFIQRVHGEAALASASRYNAWRLPSRKVKQRYRQQAYQWFDTPHQGQI CCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEE SLRFSPQGWRIQGLRDQILPRWYHQWFGVSEDNG EEEECCCCCEECCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 8094880 [H]