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The map label for this gene is ybjX [H]

Identifier: 16764302

GI number: 16764302

Start: 1017515

End: 1018483

Strand: Reverse

Name: ybjX [H]

Synonym: STM0940

Alternate gene names: 16764302

Gene position: 1018483-1017515 (Counterclockwise)

Preceding gene: 16764305

Following gene: 16764300

Centisome position: 20.97

GC content: 46.85

Gene sequence:

>969_bases
ATGTCGCGGATTACGATCATGACACAGCTTACAGATAATACCTGGTACACTTCAGATTACATCTCTCCTTTACAATTATT
TATTCGTCTGACGCGCGGGCAATTACAGCCAGGAAAATTCTGGCGTAAAGCCAGCTTTCGTCGCAAGTTTTTAATCCGCT
CATTAGTCATGCCGCGTGCGACCAGCCAATTACTGACCAATCTCACCCAATGGCCGGAGTTAAATACGTTACTTGCTCGT
CAGCCGCGTTTGCCTATTCGGCTACATCGTCCTTATATGGCTGTAAATATTAAACGCGATTTCGCCTTAGATGCGCTGTG
TTTTCATTATCAACAGATGCGCCAACTTTTATCGCGGGAACAACAAGTTAGCTATTTAAGTCAGTATGGCCTGAATCTTG
CTAAATTTGAAACTAAAACCGGCGAGTTGTTTCAACTTGATTTAGTCAGTCTGGTCTCACTGGATAAAGAAGGTGAAAGC
ACTATTGTTGTTCGCGACGCACAGTTACGTATTCTGGCAGAGATCACATTTACCCTGTGTCGCTTTAACCAACAACGCAC
ACTATTTATCGGCGGATTACAGGGCGCGGCAAACGACGTCCCTCACGAAATTATCCAGCAGGCGACCAAAGCCTGCCATG
GTCTTTTTCCCAAACGCATCGTGATGGAGGCTCTCTGTCAGTTTGCGCAAGTCTTTCAGGCAGAAAAGATTATAGCCGTG
AGTAACGATGCGCACGTTTATCGTAGCTGGCGATACATGGATAAAAAGACGCAAATGCATGCCGACTATGACGCGTTTTG
GGAATCGTTAGGCGGTGAAAGAATTAAAGGGAATTACTATACGCTGCCGCTGGCGATCGCCCGAAAAAGCGAAGCGGAGA
TCGCCAGTAAAAAACGGGCCGAGTATCGCCGCCGCTATGCATTACTCGATAGCGTCGTCGAACAGGTTCCGGCCACATTC
AAACGCTAA

Upstream 100 bases:

>100_bases
AGAAAGTAAACCGTATCTAAACAAACCTGACGCAATAAAGATAGCGCCGGCTGTATTGACGATTGGTTAATGTTTCCTGT
GGTTCAATCTCGACAATCTT

Downstream 100 bases:

>100_bases
TCCGCCCGGCCCCGCGCCAGCCAAACCACGCGCGAGAACATCTTTCTGAACAGCGGCGGCACGGCGTCAATTCCGCGCCG
CCCGGCTTCCATCGCGACTT

Product: VirK-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MSRITIMTQLTDNTWYTSDYISPLQLFIRLTRGQLQPGKFWRKASFRRKFLIRSLVMPRATSQLLTNLTQWPELNTLLAR
QPRLPIRLHRPYMAVNIKRDFALDALCFHYQQMRQLLSREQQVSYLSQYGLNLAKFETKTGELFQLDLVSLVSLDKEGES
TIVVRDAQLRILAEITFTLCRFNQQRTLFIGGLQGAANDVPHEIIQQATKACHGLFPKRIVMEALCQFAQVFQAEKIIAV
SNDAHVYRSWRYMDKKTQMHADYDAFWESLGGERIKGNYYTLPLAIARKSEAEIASKKRAEYRRRYALLDSVVEQVPATF
KR

Sequences:

>Translated_322_residues
MSRITIMTQLTDNTWYTSDYISPLQLFIRLTRGQLQPGKFWRKASFRRKFLIRSLVMPRATSQLLTNLTQWPELNTLLAR
QPRLPIRLHRPYMAVNIKRDFALDALCFHYQQMRQLLSREQQVSYLSQYGLNLAKFETKTGELFQLDLVSLVSLDKEGES
TIVVRDAQLRILAEITFTLCRFNQQRTLFIGGLQGAANDVPHEIIQQATKACHGLFPKRIVMEALCQFAQVFQAEKIIAV
SNDAHVYRSWRYMDKKTQMHADYDAFWESLGGERIKGNYYTLPLAIARKSEAEIASKKRAEYRRRYALLDSVVEQVPATF
KR
>Mature_321_residues
SRITIMTQLTDNTWYTSDYISPLQLFIRLTRGQLQPGKFWRKASFRRKFLIRSLVMPRATSQLLTNLTQWPELNTLLARQ
PRLPIRLHRPYMAVNIKRDFALDALCFHYQQMRQLLSREQQVSYLSQYGLNLAKFETKTGELFQLDLVSLVSLDKEGEST
IVVRDAQLRILAEITFTLCRFNQQRTLFIGGLQGAANDVPHEIIQQATKACHGLFPKRIVMEALCQFAQVFQAEKIIAVS
NDAHVYRSWRYMDKKTQMHADYDAFWESLGGERIKGNYYTLPLAIARKSEAEIASKKRAEYRRRYALLDSVVEQVPATFK
R

Specific function: Unknown

COG id: COG2990

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0461 [H]

Homologues:

Organism=Escherichia coli, GI1787103, Length=315, Percent_Identity=57.1428571428571, Blast_Score=368, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007488 [H]

Pfam domain/function: PF04393 DUF535 [H]

EC number: NA

Molecular weight: Translated: 37523; Mature: 37392

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRITIMTQLTDNTWYTSDYISPLQLFIRLTRGQLQPGKFWRKASFRRKFLIRSLVMPRA
CCCEEEEEEECCCCEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCH
TSQLLTNLTQWPELNTLLARQPRLPIRLHRPYMAVNIKRDFALDALCFHYQQMRQLLSRE
HHHHHHHHHCCCCHHHHHHCCCCCCEEEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHH
QQVSYLSQYGLNLAKFETKTGELFQLDLVSLVSLDKEGESTIVVRDAQLRILAEITFTLC
HHHHHHHHHCCCCEEEECCCCCEEHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHH
RFNQQRTLFIGGLQGAANDVPHEIIQQATKACHGLFPKRIVMEALCQFAQVFQAEKIIAV
HCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEE
SNDAHVYRSWRYMDKKTQMHADYDAFWESLGGERIKGNYYTLPLAIARKSEAEIASKKRA
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCEEEEEEEECCCCHHHHHHHHHH
EYRRRYALLDSVVEQVPATFKR
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRITIMTQLTDNTWYTSDYISPLQLFIRLTRGQLQPGKFWRKASFRRKFLIRSLVMPRA
CCEEEEEEECCCCEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCH
TSQLLTNLTQWPELNTLLARQPRLPIRLHRPYMAVNIKRDFALDALCFHYQQMRQLLSRE
HHHHHHHHHCCCCHHHHHHCCCCCCEEEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHH
QQVSYLSQYGLNLAKFETKTGELFQLDLVSLVSLDKEGESTIVVRDAQLRILAEITFTLC
HHHHHHHHHCCCCEEEECCCCCEEHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHH
RFNQQRTLFIGGLQGAANDVPHEIIQQATKACHGLFPKRIVMEALCQFAQVFQAEKIIAV
HCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEE
SNDAHVYRSWRYMDKKTQMHADYDAFWESLGGERIKGNYYTLPLAIARKSEAEIASKKRA
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCEEEEEEEECCCCHHHHHHHHHH
EYRRRYALLDSVVEQVPATFKR
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]