| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16764278
Identifier: 16764278
GI number: 16764278
Start: 987126
End: 987869
Strand: Direct
Name: 16764278
Synonym: STM0916
Alternate gene names: NA
Gene position: 987126-987869 (Clockwise)
Preceding gene: 16764277
Following gene: 39546305
Centisome position: 20.32
GC content: 56.85
Gene sequence:
>744_bases ATGGGCGTACCCAACCCACTGATAAAAACCAAAGGCGCCGGGACCACGTTCTGGCTGTACACCGGACGTGGCGACGCGTT TCACAACCCGCTGGCTGATGACGACTGGCTTCGCCTGGCAGGTATTAAAGATCTGCAGCCGGGTGAAATGACTGCCGATG CGGAAGATGATGATTATCTTGATGATGAAGATGCTGACTGGAAAAGTACCACGCAGGGGCAGAAAAGTGTCGGTGATACC ACGGCAACACTGGCCTGGAAACCGGGTGAAACCGGACAGAAGACGCTGGTGGATCTGTTTGACTCCGGCGAGGTCCGTGC CTTTCGCATCAAATACCCCAATGGTACCGTCGATATCTTTCGCGGCTGGCTGAGTTCACTCGGTAAAACCATTACCGCCA AAGAAGTGATGACGCGCACTGTGAAAATCAGTGGTGTCGGGCGTCCCTTCCTGGCTGAAGAAGATGCGCCGTCCGTGATC AGTGTTTCCGGGGTGACCGTGGCGCCGTTAAATGCGTCGGTGGCTGTCGGGGCCACCACCACGCTGACTTTTACCCTCAA ACCGGATGATGCCACGGACAAATCCCTGCGTATCGCATCATCCGATACCACGCTTGCCACCGTCACGCAAAAGGACAATG TGGCCACCGTGAAAGGGGTGAAAGCGGGCAGCGTGACTGTCGTTGGTATCACCACGGACGGCAGCCTGGTCGCTGTGGCT CCGGTCACGGTCACTGCCCCTTAA
Upstream 100 bases:
>100_bases ACGCCGCTGGGTTATGACTACCAGCGCGACAGTGAAATGGCAACGTGGGGCATGGCAGAAATCACGTACCGGATCACCTA CACCAACTGAGGATACTGTT
Downstream 100 bases:
>100_bases TTTTCTTATTCCTGCCCCGGCTCCGGGGCTTTGCGGGAAAAATCATGTTTCTGAAAACCGATACCTTTACATACGGTGGT CATTCCGCCGTGCTCAGTGA
Product: major tail protein
Products: NA
Alternate protein names: Gifsy-2 Prophage VmtV; Ig Domain-Containing Domain-Containing Protein; Tail-Like Protein; Tail Protein
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MGVPNPLIKTKGAGTTFWLYTGRGDAFHNPLADDDWLRLAGIKDLQPGEMTADAEDDDYLDDEDADWKSTTQGQKSVGDT TATLAWKPGETGQKTLVDLFDSGEVRAFRIKYPNGTVDIFRGWLSSLGKTITAKEVMTRTVKISGVGRPFLAEEDAPSVI SVSGVTVAPLNASVAVGATTTLTFTLKPDDATDKSLRIASSDTTLATVTQKDNVATVKGVKAGSVTVVGITTDGSLVAVA PVTVTAP
Sequences:
>Translated_247_residues MGVPNPLIKTKGAGTTFWLYTGRGDAFHNPLADDDWLRLAGIKDLQPGEMTADAEDDDYLDDEDADWKSTTQGQKSVGDT TATLAWKPGETGQKTLVDLFDSGEVRAFRIKYPNGTVDIFRGWLSSLGKTITAKEVMTRTVKISGVGRPFLAEEDAPSVI SVSGVTVAPLNASVAVGATTTLTFTLKPDDATDKSLRIASSDTTLATVTQKDNVATVKGVKAGSVTVVGITTDGSLVAVA PVTVTAP >Mature_246_residues GVPNPLIKTKGAGTTFWLYTGRGDAFHNPLADDDWLRLAGIKDLQPGEMTADAEDDDYLDDEDADWKSTTQGQKSVGDTT ATLAWKPGETGQKTLVDLFDSGEVRAFRIKYPNGTVDIFRGWLSSLGKTITAKEVMTRTVKISGVGRPFLAEEDAPSVIS VSGVTVAPLNASVAVGATTTLTFTLKPDDATDKSLRIASSDTTLATVTQKDNVATVKGVKAGSVTVVGITTDGSLVAVAP VTVTAP
Specific function: Unknown
COG id: COG5492
COG function: function code N; Bacterial surface proteins containing Ig-like domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25951; Mature: 25820
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVPNPLIKTKGAGTTFWLYTGRGDAFHNPLADDDWLRLAGIKDLQPGEMTADAEDDDYL CCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCCC DDEDADWKSTTQGQKSVGDTTATLAWKPGETGQKTLVDLFDSGEVRAFRIKYPNGTVDIF CCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCCHHHHEEECCCCEEEEEEECCCCCHHHH RGWLSSLGKTITAKEVMTRTVKISGVGRPFLAEEDAPSVISVSGVTVAPLNASVAVGATT HHHHHHHCCEEEHHHHEEEEEEEECCCCCCCCCCCCCCEEEECCEEEECCCCEEEECCEE TLTFTLKPDDATDKSLRIASSDTTLATVTQKDNVATVKGVKAGSVTVVGITTDGSLVAVA EEEEEECCCCCCCCEEEEECCCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEE PVTVTAP EEEEECC >Mature Secondary Structure GVPNPLIKTKGAGTTFWLYTGRGDAFHNPLADDDWLRLAGIKDLQPGEMTADAEDDDYL CCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCCC DDEDADWKSTTQGQKSVGDTTATLAWKPGETGQKTLVDLFDSGEVRAFRIKYPNGTVDIF CCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCCHHHHEEECCCCEEEEEEECCCCCHHHH RGWLSSLGKTITAKEVMTRTVKISGVGRPFLAEEDAPSVISVSGVTVAPLNASVAVGATT HHHHHHHCCEEEHHHHEEEEEEEECCCCCCCCCCCCCCEEEECCEEEECCCCEEEECCEE TLTFTLKPDDATDKSLRIASSDTTLATVTQKDNVATVKGVKAGSVTVVGITTDGSLVAVA EEEEEECCCCCCCCEEEEECCCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEE PVTVTAP EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA