| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
Click here to switch to the map view.
The map label for this gene is 16764266
Identifier: 16764266
GI number: 16764266
Start: 974374
End: 974766
Strand: Reverse
Name: 16764266
Synonym: STM0904
Alternate gene names: NA
Gene position: 974766-974374 (Counterclockwise)
Preceding gene: 16764275
Following gene: 16764259
Centisome position: 20.07
GC content: 36.9
Gene sequence:
>393_bases ATGCCAGGATACTATAAAATCAGTCATAGTTGGGAGTACAGGAGACGTACATGCCAGGATGATGTCCTTCTGGAAGCTGT TATCACTTCAGATACAAATCTGAATACAGAAAAAACACTTCTACAATGGCTGAATGACAAGAATAAAAACAAGGGAACCA ATACTGTCGATTATAAAGATATCACGTGCTGGTACTACGGTGGAGTATGGCTACATTATGCTATTAACAATAACGCCCTG TCTTTATATATGCATTCAAGTGGGGAGGATGCTTTTGATTCACTCAATTACTGCGCCTATGAAATAGCAAAAACATTTTA TAAAAATCATTCTGACATTAGCATTCTATGGATTGAACACCCACACAAACGTAACAAGCTTAAAGAAACATGA
Upstream 100 bases:
>100_bases CTTTACCTTCAGTATTTACTGACCGCTTACTTTTCTTGAGCGGGATTTTTTATCGGCAGCAAGTAAAAAATTACACTGCA TCGCTATCAGGAGAACAAAA
Downstream 100 bases:
>100_bases ATACAAGATTAATCATAAAAAACCCGCACGGTGGCGGGTGATTTAGAATTAATAATCAACAGGCGTAACTCTGCATGATT AGAAGCATACAGGACAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MPGYYKISHSWEYRRRTCQDDVLLEAVITSDTNLNTEKTLLQWLNDKNKNKGTNTVDYKDITCWYYGGVWLHYAINNNAL SLYMHSSGEDAFDSLNYCAYEIAKTFYKNHSDISILWIEHPHKRNKLKET
Sequences:
>Translated_130_residues MPGYYKISHSWEYRRRTCQDDVLLEAVITSDTNLNTEKTLLQWLNDKNKNKGTNTVDYKDITCWYYGGVWLHYAINNNAL SLYMHSSGEDAFDSLNYCAYEIAKTFYKNHSDISILWIEHPHKRNKLKET >Mature_129_residues PGYYKISHSWEYRRRTCQDDVLLEAVITSDTNLNTEKTLLQWLNDKNKNKGTNTVDYKDITCWYYGGVWLHYAINNNALS LYMHSSGEDAFDSLNYCAYEIAKTFYKNHSDISILWIEHPHKRNKLKET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15393; Mature: 15262
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGYYKISHSWEYRRRTCQDDVLLEAVITSDTNLNTEKTLLQWLNDKNKNKGTNTVDYKD CCCEEEECCCHHHHHHCCCCHHHEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCE ITCWYYGGVWLHYAINNNALSLYMHSSGEDAFDSLNYCAYEIAKTFYKNHSDISILWIEH EEEEEECCEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC PHKRNKLKET CCCCCCCCCC >Mature Secondary Structure PGYYKISHSWEYRRRTCQDDVLLEAVITSDTNLNTEKTLLQWLNDKNKNKGTNTVDYKD CCEEEECCCHHHHHHCCCCHHHEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCE ITCWYYGGVWLHYAINNNALSLYMHSSGEDAFDSLNYCAYEIAKTFYKNHSDISILWIEH EEEEEECCEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC PHKRNKLKET CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA