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The map label for this gene is quuQ [H]

Identifier: 16764265

GI number: 16764265

Start: 973404

End: 974219

Strand: Direct

Name: quuQ [H]

Synonym: STM0903

Alternate gene names: 16764265

Gene position: 973404-974219 (Clockwise)

Preceding gene: 16764264

Following gene: 16764267

Centisome position: 20.04

GC content: 54.66

Gene sequence:

>816_bases
ATGAAACTGGAAGCATCGCTAAAACACTTCAGCCCTCAGGGGATGCACATCAGCGACAGTGTGAAAGAGACATCGCCGGA
TCGGCTTACAGGTACCGATATAATGGTCGCTATTGGTACCACCAGCAGCCGTGCGCGCTTCGGCCTGGCTGCTTTCTTCG
GAAAGGCCGGGATCAGCAAAACGGATGAGCAACTGGCGGTTCAGGCGCTGGTGCGTCACGCGATGGATACTGCACCGAAG
AACGTGCGCAAAGCTGCAGGTGGTGAATTTGGCTGGTGTATGCTGGTACTGGCGCAGTTTGCCTTTGCTGAGTATTCCCG
TTCGGCAGCTACCAGCGTGACATGTCACACCTGCAAAGGCAGTGGGCGAATTACCCGAACGCAGACAACCCGCAAAGTGT
CTTACCCGTGGGGGAAAGCGCCATACTGGGCCAGTAAGTCCCGCGCTGTCCGCCCGTCCGACTGGGAGAAATGGACGGAG
GTAACGGAGATAGTGCCGGCAGTCTGTGAAGCTTGCGACGGTAAGGGAACAATAAGCGCCCGGTGCCGTTGCGGTGGTAA
AGGTGAAGTGCTCGACCGCATTGCGACAAAAGAAAGAGGTGTGCCGGTGTTCAAAACCTGTGAACGTTGTAGTGGCGAGG
GTTATTCCAGAGTGTCTTCTGCGACCGTTCATCGCGCTATCCTTAAACGTCTTCCGGATCTCCACCAATCATCCTGGTCT
CGCAACTGGAAGCCATTCTATGAAATGCTGGTTGATGTATTGTACAAAGGAGAGCGTCAGGCCGCATCAGAATTTGAGAA
GGCAACAGCTTATTGA

Upstream 100 bases:

>100_bases
CCGTAGAGGTGTGCCGCTGGTTTCTGGCAAGCGGAAAGGATGAATATATGGAAGACAAAGGCGCGGCGGTTATTCTTAAT
CTGGTTGGAGAGTGTGAAGA

Downstream 100 bases:

>100_bases
TGTAATCGGAACAAATGGCGACAAGTTTTTGCACGATAAGGTTGACTTTGCATAAACTTGTCCTGTATGCTTCTAATCAT
GCAGAGTTACGCCTGTTGAT

Product: chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKLEASLKHFSPQGMHISDSVKETSPDRLTGTDIMVAIGTTSSRARFGLAAFFGKAGISKTDEQLAVQALVRHAMDTAPK
NVRKAAGGEFGWCMLVLAQFAFAEYSRSAATSVTCHTCKGSGRITRTQTTRKVSYPWGKAPYWASKSRAVRPSDWEKWTE
VTEIVPAVCEACDGKGTISARCRCGGKGEVLDRIATKERGVPVFKTCERCSGEGYSRVSSATVHRAILKRLPDLHQSSWS
RNWKPFYEMLVDVLYKGERQAASEFEKATAY

Sequences:

>Translated_271_residues
MKLEASLKHFSPQGMHISDSVKETSPDRLTGTDIMVAIGTTSSRARFGLAAFFGKAGISKTDEQLAVQALVRHAMDTAPK
NVRKAAGGEFGWCMLVLAQFAFAEYSRSAATSVTCHTCKGSGRITRTQTTRKVSYPWGKAPYWASKSRAVRPSDWEKWTE
VTEIVPAVCEACDGKGTISARCRCGGKGEVLDRIATKERGVPVFKTCERCSGEGYSRVSSATVHRAILKRLPDLHQSSWS
RNWKPFYEMLVDVLYKGERQAASEFEKATAY
>Mature_271_residues
MKLEASLKHFSPQGMHISDSVKETSPDRLTGTDIMVAIGTTSSRARFGLAAFFGKAGISKTDEQLAVQALVRHAMDTAPK
NVRKAAGGEFGWCMLVLAQFAFAEYSRSAATSVTCHTCKGSGRITRTQTTRKVSYPWGKAPYWASKSRAVRPSDWEKWTE
VTEIVPAVCEACDGKGTISARCRCGGKGEVLDRIATKERGVPVFKTCERCSGEGYSRVSSATVHRAILKRLPDLHQSSWS
RNWKPFYEMLVDVLYKGERQAASEFEKATAY

Specific function: Positively regulate expression of some phage genes. Bacterial host RNA polymerase modified by antitermination proteins transcribes through termination sites that otherwise prevent expression of the regulated genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage antitermination Q type 2 family [H]

Homologues:

Organism=Escherichia coli, GI87081935, Length=270, Percent_Identity=33.7037037037037, Blast_Score=140, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003222
- InterPro:   IPR001305 [H]

Pfam domain/function: PF03589 Antiterm [H]

EC number: NA

Molecular weight: Translated: 29876; Mature: 29876

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLEASLKHFSPQGMHISDSVKETSPDRLTGTDIMVAIGTTSSRARFGLAAFFGKAGISK
CCCCCCHHHCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCC
TDEQLAVQALVRHAMDTAPKNVRKAAGGEFGWCMLVLAQFAFAEYSRSAATSVTCHTCKG
CHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEECC
SGRITRTQTTRKVSYPWGKAPYWASKSRAVRPSDWEKWTEVTEIVPAVCEACDGKGTISA
CCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
RCRCGGKGEVLDRIATKERGVPVFKTCERCSGEGYSRVSSATVHRAILKRLPDLHQSSWS
EEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHCC
RNWKPFYEMLVDVLYKGERQAASEFEKATAY
CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKLEASLKHFSPQGMHISDSVKETSPDRLTGTDIMVAIGTTSSRARFGLAAFFGKAGISK
CCCCCCHHHCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCC
TDEQLAVQALVRHAMDTAPKNVRKAAGGEFGWCMLVLAQFAFAEYSRSAATSVTCHTCKG
CHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEECC
SGRITRTQTTRKVSYPWGKAPYWASKSRAVRPSDWEKWTEVTEIVPAVCEACDGKGTISA
CCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
RCRCGGKGEVLDRIATKERGVPVFKTCERCSGEGYSRVSSATVHRAILKRLPDLHQSSWS
EEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHCC
RNWKPFYEMLVDVLYKGERQAASEFEKATAY
CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]