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The map label for this gene is ybjN [H]

Identifier: 16764238

GI number: 16764238

Start: 947560

End: 948036

Strand: Direct

Name: ybjN [H]

Synonym: STM0876

Alternate gene names: 16764238

Gene position: 947560-948036 (Clockwise)

Preceding gene: 16764237

Following gene: 16764239

Centisome position: 19.51

GC content: 50.1

Gene sequence:

>477_bases
ATGATATCACTGGTCGTTCCCACTCTGGATACGTTGCGTCAATGGCTCGACGACCTGGGCATGAATTTCTTCGAATGTGA
TACCTGCCAGGCGCTGCATTTGCCGCATATGCAGAATTTTGACGGCGTCTACGATGCTAAAATCGATTTGGTGGACAACA
CCGTTCTTTTTTCCGCGATGGCGGAGGTCAGGCCTTCCGCGTTGCTGCCGCTGGCGGCCGATCTCTCTGCTATTAACGCC
AGTTCGTTGACGGTAAAAGCCTTTCTCGATATGCAGGATGATAATCTGCCAAAACTGGTTGTGTGCCAGTCTTTATCCGT
TATGCAAGGCGTCACCTACGAACAGTTCGAATGGTTTGTTCGCCAAAGTGAAGAGCAGATTTCTATGGTGATCCTTGAGG
CCGGGGCGCATCAGCTTCTGTTTAACGCGGAAGAAGACGCGCAAAAAACCAGCGCAGTTGACCATTTTCTTCACTAA

Upstream 100 bases:

>100_bases
CTAATCGCAATCGTGGATTCCGCCGTAGTACGAAGCACGCTTTTTGCGTAAGCTGTGCCGGTAATTTTTTCATCGTCATC
GTAAGAGGTAGCACTTTATT

Downstream 100 bases:

>100_bases
TCCCTTCCGATAATCAGGCAGTCGCTGCCAGCGCGGCTGCTGTTTACACTTTTTTATGCTGCTATTAACCTTTATTTAAA
GAATTATTCACCTCCTTTCT

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MISLVVPTLDTLRQWLDDLGMNFFECDTCQALHLPHMQNFDGVYDAKIDLVDNTVLFSAMAEVRPSALLPLAADLSAINA
SSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFEWFVRQSEEQISMVILEAGAHQLLFNAEEDAQKTSAVDHFLH

Sequences:

>Translated_158_residues
MISLVVPTLDTLRQWLDDLGMNFFECDTCQALHLPHMQNFDGVYDAKIDLVDNTVLFSAMAEVRPSALLPLAADLSAINA
SSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFEWFVRQSEEQISMVILEAGAHQLLFNAEEDAQKTSAVDHFLH
>Mature_158_residues
MISLVVPTLDTLRQWLDDLGMNFFECDTCQALHLPHMQNFDGVYDAKIDLVDNTVLFSAMAEVRPSALLPLAADLSAINA
SSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFEWFVRQSEEQISMVILEAGAHQLLFNAEEDAQKTSAVDHFLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787077, Length=158, Percent_Identity=84.8101265822785, Blast_Score=280, Evalue=4e-77,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019660 [H]

Pfam domain/function: PF10722 YbjN [H]

EC number: NA

Molecular weight: Translated: 17692; Mature: 17692

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLVVPTLDTLRQWLDDLGMNFFECDTCQALHLPHMQNFDGVYDAKIDLVDNTVLFSAM
CCEEECCCHHHHHHHHHHHCCCEEECCCCCEECCCCCCCCCCEECCEEEEECHHHHHHHH
AEVRPSALLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFEWFV
HHCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCCEEHHHHHHHHHCCCHHHHHHHH
RQSEEQISMVILEAGAHQLLFNAEEDAQKTSAVDHFLH
HCCHHHHEEEEEECCCCEEEECCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MISLVVPTLDTLRQWLDDLGMNFFECDTCQALHLPHMQNFDGVYDAKIDLVDNTVLFSAM
CCEEECCCHHHHHHHHHHHCCCEEECCCCCEECCCCCCCCCCEECCEEEEECHHHHHHHH
AEVRPSALLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFEWFV
HHCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCCEEHHHHHHHHHCCCHHHHHHHH
RQSEEQISMVILEAGAHQLLFNAEEDAQKTSAVDHFLH
HCCHHHHEEEEEECCCCEEEECCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]