Click here to switch to the map view.

The map label for this gene is ydiS [C]

Identifier: 16764220

GI number: 16764220

Start: 930332

End: 932017

Strand: Direct

Name: ydiS [C]

Synonym: STM0858

Alternate gene names: 16764220

Gene position: 930332-932017 (Clockwise)

Preceding gene: 16764219

Following gene: 16764225

Centisome position: 19.15

GC content: 43.24

Gene sequence:

>1686_bases
ATGAACGATACACTTTCTAATACCCAGCAATCACGTGAGACAATAGAATGTGATGTTCTTATTGTGGGAGCAGGACCCGC
CGGATTATCTGCAGCTCTTAAACTTAAATTACAGGCAAATGACGCAGGAAAAGAACTGTCCATTATCGTCCTTGATAAAG
GAGCTGAGCCTGGTTCTCATATTCTCAGTGGGGCAGTCATGGATCCCCGAGCGCTGAATGAACTAATTCCTGATTGGCAG
GAAAGAGGCGCACCCATTAAACAGCCTGTTACTCAGGATAAATTACTGTTACTGACGAATGAAAAATGTATTAATTTGCC
GGATGCATTGATTCCTGATAATTTTCGCAACCATGGAAACTTTATCGTAAGCCTCGGTAATCTCATTAAATGGCTCGCCG
GTCAGGCAGAAACGTCAGGCGTGGATATTTATGCAGGCTTTTCGGCAACTGAGATACTGTATGATCAGGATACTAACATT
ATCGGTGTAGTAACTGGTGATATGGGACGTCATCGGGATGGCAGCAAGAAAGAGGGGTTCCTGAGTGGAATAGAAATTCT
GGCAAAATATACAATTTTTGCCGAAGGGGCCCGCGGTAGTCTGGCTAAAGAACTGATCAAAAAATTTCATCTTGATACAG
GCAAAGCACCCCAGAGTTTTAGCATAGGCATAAAAGAGTTGTGGGAGGTTCCATCAGACCAGTCCCATCCGGGGCTTGTA
ATTCACACCACAGGTTGGCCTCTGGATAAAGAGTCGTTCGGGGGTGGGTTTCTCTATCATCTTAATGATAATAAAATTGC
ACTAGGTTTGGTTGTGGGACTTGATTATTCAAATCCCTGGTTAAGCCCTTTTCAGGAAATGCAGCGCCTGAAAACACACC
CTTCTATACGCAAATACATTGACCGGGGTAAGCGTATTGGTTATGGCGCAAGAGCAATCAATAACGGCGGGATTGCGTCT
ATGCCTGATCCCTGTTTACCTGGTGGTCTGCTGATTGGTTGTAATGCCGGTACGCTCAATGCAAGTAGAATCAAGGGCAT
CCATACAGCTATCAAAAGTGGCATGATAGCGGCTGACGCTATATTTAATGCTTTGCTGGACAACAGGAAAAACGACATAC
TGACAGAATATCAAACATTACTGCGACAGAGCTGGCTTTGGCAGGAACTGGAAAATGGTAGTAATTTCAAACCCTGGTTT
AAAAAAGGGCGTGTGATAGGTTTTATTATGACTGGCATTGAGCATTGGCTGCTTCCCCGAATGGGTATAAAAAAAATCCC
CTGGCGTGTAAAAAATAACCGACCGGACAATATCACTCTGCAACCGGCCAACAAAAGCCAGAAAAAACTGTACGACAAAC
CTGACGGTAAACTGACGTTTGATATTTTGTCATCCGTCTATCTCAGTAACACCTGGCATGATGACGACCAGCCAGTACAT
TTGAAAATCAGTGATCAGAATATCCCTATATCCATTAATCTGGATATTTATGGTGGCCCCGAAGAACGATATTGCCCTGC
CGGAGTATATGAATTTTTACAGGATAGTGAAACACAAAATATGCGTCTGCAAATAAATTCACAGAACTGTATTCACTGTA
AAGTTTGTGACATTAAAGATCCTAAACAAAATATAACCTGGACTACGCCTGAAGGTGGCAACGGACCAAATTATACAGGG
ATGTAA

Upstream 100 bases:

>100_bases
TTTATCACTATGATATTTATTTCATTGGTTACAATATGAATGCAATTTTATTTACATAATATAGCTGTTCCTACGGTGCT
GAAAAATTAAGGAGTTAATA

Downstream 100 bases:

>100_bases
CGCTATCACTCAGTCTGAGCTGTGAGCATAGTAACCAGTTTTTGTGTGAAGCCGGGTAATTTGTCAAAGCTTCTGGCGCA
GATTTGTAATTTTCTTAATG

Product: dehydrogenase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 561; Mature: 561

Protein sequence:

>561_residues
MNDTLSNTQQSRETIECDVLIVGAGPAGLSAALKLKLQANDAGKELSIIVLDKGAEPGSHILSGAVMDPRALNELIPDWQ
ERGAPIKQPVTQDKLLLLTNEKCINLPDALIPDNFRNHGNFIVSLGNLIKWLAGQAETSGVDIYAGFSATEILYDQDTNI
IGVVTGDMGRHRDGSKKEGFLSGIEILAKYTIFAEGARGSLAKELIKKFHLDTGKAPQSFSIGIKELWEVPSDQSHPGLV
IHTTGWPLDKESFGGGFLYHLNDNKIALGLVVGLDYSNPWLSPFQEMQRLKTHPSIRKYIDRGKRIGYGARAINNGGIAS
MPDPCLPGGLLIGCNAGTLNASRIKGIHTAIKSGMIAADAIFNALLDNRKNDILTEYQTLLRQSWLWQELENGSNFKPWF
KKGRVIGFIMTGIEHWLLPRMGIKKIPWRVKNNRPDNITLQPANKSQKKLYDKPDGKLTFDILSSVYLSNTWHDDDQPVH
LKISDQNIPISINLDIYGGPEERYCPAGVYEFLQDSETQNMRLQINSQNCIHCKVCDIKDPKQNITWTTPEGGNGPNYTG
M

Sequences:

>Translated_561_residues
MNDTLSNTQQSRETIECDVLIVGAGPAGLSAALKLKLQANDAGKELSIIVLDKGAEPGSHILSGAVMDPRALNELIPDWQ
ERGAPIKQPVTQDKLLLLTNEKCINLPDALIPDNFRNHGNFIVSLGNLIKWLAGQAETSGVDIYAGFSATEILYDQDTNI
IGVVTGDMGRHRDGSKKEGFLSGIEILAKYTIFAEGARGSLAKELIKKFHLDTGKAPQSFSIGIKELWEVPSDQSHPGLV
IHTTGWPLDKESFGGGFLYHLNDNKIALGLVVGLDYSNPWLSPFQEMQRLKTHPSIRKYIDRGKRIGYGARAINNGGIAS
MPDPCLPGGLLIGCNAGTLNASRIKGIHTAIKSGMIAADAIFNALLDNRKNDILTEYQTLLRQSWLWQELENGSNFKPWF
KKGRVIGFIMTGIEHWLLPRMGIKKIPWRVKNNRPDNITLQPANKSQKKLYDKPDGKLTFDILSSVYLSNTWHDDDQPVH
LKISDQNIPISINLDIYGGPEERYCPAGVYEFLQDSETQNMRLQINSQNCIHCKVCDIKDPKQNITWTTPEGGNGPNYTG
M
>Mature_561_residues
MNDTLSNTQQSRETIECDVLIVGAGPAGLSAALKLKLQANDAGKELSIIVLDKGAEPGSHILSGAVMDPRALNELIPDWQ
ERGAPIKQPVTQDKLLLLTNEKCINLPDALIPDNFRNHGNFIVSLGNLIKWLAGQAETSGVDIYAGFSATEILYDQDTNI
IGVVTGDMGRHRDGSKKEGFLSGIEILAKYTIFAEGARGSLAKELIKKFHLDTGKAPQSFSIGIKELWEVPSDQSHPGLV
IHTTGWPLDKESFGGGFLYHLNDNKIALGLVVGLDYSNPWLSPFQEMQRLKTHPSIRKYIDRGKRIGYGARAINNGGIAS
MPDPCLPGGLLIGCNAGTLNASRIKGIHTAIKSGMIAADAIFNALLDNRKNDILTEYQTLLRQSWLWQELENGSNFKPWF
KKGRVIGFIMTGIEHWLLPRMGIKKIPWRVKNNRPDNITLQPANKSQKKLYDKPDGKLTFDILSSVYLSNTWHDDDQPVH
LKISDQNIPISINLDIYGGPEERYCPAGVYEFLQDSETQNMRLQINSQNCIHCKVCDIKDPKQNITWTTPEGGNGPNYTG
M

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=560, Percent_Identity=50.7142857142857, Blast_Score=568, Evalue=1e-162,
Organism=Escherichia coli, GI1787991, Length=391, Percent_Identity=28.1329923273657, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI87082155, Length=381, Percent_Identity=26.509186351706, Blast_Score=107, Evalue=3e-24,
Organism=Escherichia coli, GI1786227, Length=390, Percent_Identity=28.2051282051282, Blast_Score=104, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI25144720, Length=561, Percent_Identity=47.7718360071301, Blast_Score=538, Evalue=1e-153,
Organism=Saccharomyces cerevisiae, GI6324932, Length=586, Percent_Identity=40.9556313993174, Blast_Score=459, Evalue=1e-130,
Organism=Drosophila melanogaster, GI24652256, Length=568, Percent_Identity=48.7676056338028, Blast_Score=568, Evalue=1e-162,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 62033; Mature: 62033

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDTLSNTQQSRETIECDVLIVGAGPAGLSAALKLKLQANDAGKELSIIVLDKGAEPGSH
CCCCCCCHHHHCCEEEEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCHHH
ILSGAVMDPRALNELIPDWQERGAPIKQPVTQDKLLLLTNEKCINLPDALIPDNFRNHGN
HHCCCCCCHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
FIVSLGNLIKWLAGQAETSGVDIYAGFSATEILYDQDTNIIGVVTGDMGRHRDGSKKEGF
EEEEHHHHHHHHCCCCCCCCEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCHHH
LSGIEILAKYTIFAEGARGSLAKELIKKFHLDTGKAPQSFSIGIKELWEVPSDQSHPGLV
HHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEE
IHTTGWPLDKESFGGGFLYHLNDNKIALGLVVGLDYSNPWLSPFQEMQRLKTHPSIRKYI
EECCCCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHH
DRGKRIGYGARAINNGGIASMPDPCLPGGLLIGCNAGTLNASRIKGIHTAIKSGMIAADA
HCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHH
IFNALLDNRKNDILTEYQTLLRQSWLWQELENGSNFKPWFKKGRVIGFIMTGIEHWLLPR
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEHHHHHHHHHCC
MGIKKIPWRVKNNRPDNITLQPANKSQKKLYDKPDGKLTFDILSSVYLSNTWHDDDQPVH
CCHHHCCEEECCCCCCEEEECCCCCHHHHHCCCCCCCEEHHHHHHHHHCCCCCCCCCEEE
LKISDQNIPISINLDIYGGPEERYCPAGVYEFLQDSETQNMRLQINSQNCIHCKVCDIKD
EEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCC
PKQNITWTTPEGGNGPNYTGM
CCCCCEECCCCCCCCCCCCCC
>Mature Secondary Structure
MNDTLSNTQQSRETIECDVLIVGAGPAGLSAALKLKLQANDAGKELSIIVLDKGAEPGSH
CCCCCCCHHHHCCEEEEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCHHH
ILSGAVMDPRALNELIPDWQERGAPIKQPVTQDKLLLLTNEKCINLPDALIPDNFRNHGN
HHCCCCCCHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
FIVSLGNLIKWLAGQAETSGVDIYAGFSATEILYDQDTNIIGVVTGDMGRHRDGSKKEGF
EEEEHHHHHHHHCCCCCCCCEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCHHH
LSGIEILAKYTIFAEGARGSLAKELIKKFHLDTGKAPQSFSIGIKELWEVPSDQSHPGLV
HHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEE
IHTTGWPLDKESFGGGFLYHLNDNKIALGLVVGLDYSNPWLSPFQEMQRLKTHPSIRKYI
EECCCCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHH
DRGKRIGYGARAINNGGIASMPDPCLPGGLLIGCNAGTLNASRIKGIHTAIKSGMIAADA
HCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHH
IFNALLDNRKNDILTEYQTLLRQSWLWQELENGSNFKPWFKKGRVIGFIMTGIEHWLLPR
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEHHHHHHHHHCC
MGIKKIPWRVKNNRPDNITLQPANKSQKKLYDKPDGKLTFDILSSVYLSNTWHDDDQPVH
CCHHHCCEEECCCCCCEEEECCCCCHHHHHCCCCCCCEEHHHHHHHHHCCCCCCCCCEEE
LKISDQNIPISINLDIYGGPEERYCPAGVYEFLQDSETQNMRLQINSQNCIHCKVCDIKD
EEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCC
PKQNITWTTPEGGNGPNYTGM
CCCCCEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]