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The map label for this gene is yliC [H]

Identifier: 16764212

GI number: 16764212

Start: 921604

End: 922524

Strand: Direct

Name: yliC [H]

Synonym: STM0850

Alternate gene names: 16764212

Gene position: 921604-922524 (Clockwise)

Preceding gene: 16764211

Following gene: 16764213

Centisome position: 18.97

GC content: 54.61

Gene sequence:

>921_bases
ATGCTTAACTATGTTCTCAAGCGCCTGCTGGGATTAATTCCTACGCTGTTGATTGTGGCAGTGCTGGTGTTTTTATTTGT
TCATTTGTTGCCCGGCGACCCGGCGCGGCTGATAGCCGGACCGGAAGCCGACGCGCAGGTGATCGCGCTGGTTCGTCAGC
AGCTGGGGCTTGATCAGCCGCTTCATGTCCAGTTTTGGCATTACATCACCCATGTTTTACAAGGCGATTTCGGGACGTCA
ATGGTTTCCCGCCGCCCGGTTTCTGAGGAGATCGCCAGCCGCTTTTTGCCGACGCTGTGGCTGACGATAACCAGTATGAT
ATGGGCGGTGCTGTTTGGCATGGCGATCGGCATCGCCGCCGCCGTGTGGCGTAATCGCTGGCCTGACCGGTTAGGAATGA
CGCTTGCCGTGACCGGCATTTCTTTTCCGGCTTTTGCGCTGGGAATGTTGTTAATGCAGATTTTTTCCGTGGATCTGGGC
TGGCTACCGACCGTGGGGGCGGATAGCTGGCAACATTATATTTTACCCTCCCTGACGCTTGGCGCGGCGGTGGCATCCGT
CATGGCGCGTTTTACGCGCTCCTCGTTTGTCGATGTCCTGAGCGAGGATTACATGAGGACCGCGCGGGCGAAAGGCGTCA
GTGAAACGTGGGTGGTGTTAAAACATGGCCTGCGCAATGCAATGATCCCGGTCGTCACCATGATGGGACTGCAATTTGGC
TTTTTGCTTGGCGGCTCGATCGTCGTTGAAAAAGTGTTTAACTGGCCGGGGCTTGGGCGATTACTGGTCGACTCCGTCGA
CATGCGCGACTACCCCGTGATTCAGGCAGAAGTGCTGCTGTTTTCTCTGGAATTTATTCTTATCAACTTAGTGGTGGATG
TTCTCTATGCCGCCATTAATCCGGCTATCAGGTATAAGTAA

Upstream 100 bases:

>100_bases
GGATACCGGTTTCAGCTTTGACGATGCGGATTTGAAGTAAGTAATGCGATGGGGCTGGATGGCGCGCGCGTTGTCCGCCA
TCCGGTAAAAGGTTCGTGTG

Downstream 100 bases:

>100_bases
GGATGCGATTATTTAACTGGCGCCGTCAGGCGATTTTACATGCTATGCCGGTGGTAAAACCCGACCAGATACGCACGCCG
TGGCGGGAGTTCTGGCGTCG

Product: ABC transporter periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MLNYVLKRLLGLIPTLLIVAVLVFLFVHLLPGDPARLIAGPEADAQVIALVRQQLGLDQPLHVQFWHYITHVLQGDFGTS
MVSRRPVSEEIASRFLPTLWLTITSMIWAVLFGMAIGIAAAVWRNRWPDRLGMTLAVTGISFPAFALGMLLMQIFSVDLG
WLPTVGADSWQHYILPSLTLGAAVASVMARFTRSSFVDVLSEDYMRTARAKGVSETWVVLKHGLRNAMIPVVTMMGLQFG
FLLGGSIVVEKVFNWPGLGRLLVDSVDMRDYPVIQAEVLLFSLEFILINLVVDVLYAAINPAIRYK

Sequences:

>Translated_306_residues
MLNYVLKRLLGLIPTLLIVAVLVFLFVHLLPGDPARLIAGPEADAQVIALVRQQLGLDQPLHVQFWHYITHVLQGDFGTS
MVSRRPVSEEIASRFLPTLWLTITSMIWAVLFGMAIGIAAAVWRNRWPDRLGMTLAVTGISFPAFALGMLLMQIFSVDLG
WLPTVGADSWQHYILPSLTLGAAVASVMARFTRSSFVDVLSEDYMRTARAKGVSETWVVLKHGLRNAMIPVVTMMGLQFG
FLLGGSIVVEKVFNWPGLGRLLVDSVDMRDYPVIQAEVLLFSLEFILINLVVDVLYAAINPAIRYK
>Mature_306_residues
MLNYVLKRLLGLIPTLLIVAVLVFLFVHLLPGDPARLIAGPEADAQVIALVRQQLGLDQPLHVQFWHYITHVLQGDFGTS
MVSRRPVSEEIASRFLPTLWLTITSMIWAVLFGMAIGIAAAVWRNRWPDRLGMTLAVTGISFPAFALGMLLMQIFSVDLG
WLPTVGADSWQHYILPSLTLGAAVASVMARFTRSSFVDVLSEDYMRTARAKGVSETWVVLKHGLRNAMIPVVTMMGLQFG
FLLGGSIVVEKVFNWPGLGRLLVDSVDMRDYPVIQAEVLLFSLEFILINLVVDVLYAAINPAIRYK

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=306, Percent_Identity=90.5228758169935, Blast_Score=568, Evalue=1e-163,
Organism=Escherichia coli, GI1789965, Length=342, Percent_Identity=43.859649122807, Blast_Score=265, Evalue=3e-72,
Organism=Escherichia coli, GI1789888, Length=309, Percent_Identity=41.1003236245955, Blast_Score=221, Evalue=6e-59,
Organism=Escherichia coli, GI1787761, Length=326, Percent_Identity=42.0245398773006, Blast_Score=211, Evalue=4e-56,
Organism=Escherichia coli, GI1787497, Length=308, Percent_Identity=35.7142857142857, Blast_Score=191, Evalue=7e-50,
Organism=Escherichia coli, GI1787550, Length=273, Percent_Identity=31.5018315018315, Blast_Score=147, Evalue=7e-37,
Organism=Escherichia coli, GI1788504, Length=363, Percent_Identity=26.1707988980716, Blast_Score=118, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33976; Mature: 33976

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNYVLKRLLGLIPTLLIVAVLVFLFVHLLPGDPARLIAGPEADAQVIALVRQQLGLDQP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCHHHHHHHHHHHHCCCCC
LHVQFWHYITHVLQGDFGTSMVSRRPVSEEIASRFLPTLWLTITSMIWAVLFGMAIGIAA
HHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVWRNRWPDRLGMTLAVTGISFPAFALGMLLMQIFSVDLGWLPTVGADSWQHYILPSLTL
HHHHCCCCHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
GAAVASVMARFTRSSFVDVLSEDYMRTARAKGVSETWVVLKHGLRNAMIPVVTMMGLQFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLGGSIVVEKVFNWPGLGRLLVDSVDMRDYPVIQAEVLLFSLEFILINLVVDVLYAAIN
HHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PAIRYK
HHHCCC
>Mature Secondary Structure
MLNYVLKRLLGLIPTLLIVAVLVFLFVHLLPGDPARLIAGPEADAQVIALVRQQLGLDQP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCHHHHHHHHHHHHCCCCC
LHVQFWHYITHVLQGDFGTSMVSRRPVSEEIASRFLPTLWLTITSMIWAVLFGMAIGIAA
HHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVWRNRWPDRLGMTLAVTGISFPAFALGMLLMQIFSVDLGWLPTVGADSWQHYILPSLTL
HHHHCCCCHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
GAAVASVMARFTRSSFVDVLSEDYMRTARAKGVSETWVVLKHGLRNAMIPVVTMMGLQFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLGGSIVVEKVFNWPGLGRLLVDSVDMRDYPVIQAEVLLFSLEFILINLVVDVLYAAIN
HHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PAIRYK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA