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The map label for this gene is ybhL [H]

Identifier: 16764170

GI number: 16764170

Start: 873389

End: 874093

Strand: Direct

Name: ybhL [H]

Synonym: STM0807

Alternate gene names: 16764170

Gene position: 873389-874093 (Clockwise)

Preceding gene: 16764169

Following gene: 16764171

Centisome position: 17.98

GC content: 49.79

Gene sequence:

>705_bases
ATGGACAGATTTCCACGATCTGATTCAATAGTGCAGGCGCGGTCCGGCCTGCAGACCTATATGGCGCAAGTGTATGGCTG
GATGACGGTCGGACTGTTACTGACCGCGTTTATCGCGTGGTATGCGGCTAATACGCCAGCCGTCATGATGTTTGTCTTTT
CCAGTAAGATCACTTTCTTTGGCTTAATTATTGCCCAGCTTGCGCTGGTGTTTGTTCTGTCGGGACTGGTGCATAAACTT
AGCGCCGGAATGGCGACGACGCTGTTTATGCTCTATTCGGCGCTAACCGGATTGACGTTATCCAGTATTTTTATCGTTTA
CACCTACTCCTCTATCGCCAGCACGTTTGTGGTGACGGGGGGAATGTTTGGCGCCATGAGCCTGTACGGGTACACCACTA
AACGCGATCTTAGCGGTTTCGGCAATATGCTGTTTATGGCGCTTATTGGTATCGTTCTGGCGTCGCTGGTCAATTTCTGG
CTGAAGAGTGAAGCGCTGATGTGGGCGGTAACCTATATCGGGGTGGTGGTGTTTGTCGGTCTGACCGCCTATGACACGCA
GAAACTGAAAAATATCGGCGAGCAAATAGATACCCGAGATAGCGCTAATCTGCGTAAATATTCGATTCTCGGCGCGTTAA
CGCTGTACCTGGACTTTATCAACCTGTTCCTGATGTTACTGCGTATTTTTGGTAATCGCCGCTAA

Upstream 100 bases:

>100_bases
ATCGCTGGGTCGAAGCGCGCGACAGCGACCAGCAGTTGGCGAAACGTTGGTAGCAGAATGTGATACGCTTTAGGGTATCA
TTTCCACACAGGAGTTCATC

Downstream 100 bases:

>100_bases
TTATAGCGATCTCTTAAAATCCTGGCCCTGCGCCAGGATTTTTTTTAGGACTATATTTAGGGCGAAACAGCATAAATATC
TTAGAAATGTTTTCCTACGC

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MDRFPRSDSIVQARSGLQTYMAQVYGWMTVGLLLTAFIAWYAANTPAVMMFVFSSKITFFGLIIAQLALVFVLSGLVHKL
SAGMATTLFMLYSALTGLTLSSIFIVYTYSSIASTFVVTGGMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFW
LKSEALMWAVTYIGVVVFVGLTAYDTQKLKNIGEQIDTRDSANLRKYSILGALTLYLDFINLFLMLLRIFGNRR

Sequences:

>Translated_234_residues
MDRFPRSDSIVQARSGLQTYMAQVYGWMTVGLLLTAFIAWYAANTPAVMMFVFSSKITFFGLIIAQLALVFVLSGLVHKL
SAGMATTLFMLYSALTGLTLSSIFIVYTYSSIASTFVVTGGMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFW
LKSEALMWAVTYIGVVVFVGLTAYDTQKLKNIGEQIDTRDSANLRKYSILGALTLYLDFINLFLMLLRIFGNRR
>Mature_234_residues
MDRFPRSDSIVQARSGLQTYMAQVYGWMTVGLLLTAFIAWYAANTPAVMMFVFSSKITFFGLIIAQLALVFVLSGLVHKL
SAGMATTLFMLYSALTGLTLSSIFIVYTYSSIASTFVVTGGMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFW
LKSEALMWAVTYIGVVVFVGLTAYDTQKLKNIGEQIDTRDSANLRKYSILGALTLYLDFINLFLMLLRIFGNRR

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Homo sapiens, GI116812579, Length=236, Percent_Identity=27.5423728813559, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1787004, Length=234, Percent_Identity=87.1794871794872, Blast_Score=411, Evalue=1e-116,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 25936; Mature: 25936

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRFPRSDSIVQARSGLQTYMAQVYGWMTVGLLLTAFIAWYAANTPAVMMFVFSSKITFF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GLIIAQLALVFVLSGLVHKLSAGMATTLFMLYSALTGLTLSSIFIVYTYSSIASTFVVTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFWLKSEALMWAVTYIGVVVFVG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAYDTQKLKNIGEQIDTRDSANLRKYSILGALTLYLDFINLFLMLLRIFGNRR
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDRFPRSDSIVQARSGLQTYMAQVYGWMTVGLLLTAFIAWYAANTPAVMMFVFSSKITFF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GLIIAQLALVFVLSGLVHKLSAGMATTLFMLYSALTGLTLSSIFIVYTYSSIASTFVVTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFWLKSEALMWAVTYIGVVVFVG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAYDTQKLKNIGEQIDTRDSANLRKYSILGALTLYLDFINLFLMLLRIFGNRR
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]