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The map label for this gene is ybaZ [H]

Identifier: 16763847

GI number: 16763847

Start: 523957

End: 524346

Strand: Reverse

Name: ybaZ [H]

Synonym: STM0466

Alternate gene names: 16763847

Gene position: 524346-523957 (Counterclockwise)

Preceding gene: 16763848

Following gene: 16763845

Centisome position: 10.79

GC content: 56.15

Gene sequence:

>390_bases
ATGCTGGTTTCTTGCGCATCCGGGCTTTCCTCCCCCCTTATTCCAGATTATCCTGAAGCATTAACGCAGGATTCTATTAT
GGATATTCAGGACACATTTCCTCAACGCGTCTGGCAAATCGTCGCCTCGATCCCGGAAGGGTTTGTCACGACCTACGGCG
ATGTCGCCCGGCTTGCCGGTTCGCCTCGGGCGGCGCGTCAGGTCGGCGGAGTTTTAAAACGTCTGCCGGAAGGCAGCACT
TTACCATGGCATCGGGTGGTGAACCGCCACGGCGCAATATCACTTACCGGGCCGGATCTACAGCGGCAACGTCAGGCATT
ACTGGCGGAAGGCGTGGTGGTGTCGGGAAGCGGACAAATCGATTTACAACGCTATCGCTGGGTGTATTAA

Upstream 100 bases:

>100_bases
TGCGGGAGAACCAACAGAGCCCCCATTGAGAGCGTTGTGAACCAACGCGCAGGCGCATTATCACTGCTATATCGTGCAAT
TGCAACCCATCAGGCATCGG

Downstream 100 bases:

>100_bases
CCCTCTCCGTAACGGAGAGGGTTGGCGCAGGATTAATACTGGGTAGGCGCAGGAACGGCAGAAGACGAATTGACCTGGGT
CGGCGAAGTCGATGGAACCG

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MLVSCASGLSSPLIPDYPEALTQDSIMDIQDTFPQRVWQIVASIPEGFVTTYGDVARLAGSPRAARQVGGVLKRLPEGST
LPWHRVVNRHGAISLTGPDLQRQRQALLAEGVVVSGSGQIDLQRYRWVY

Sequences:

>Translated_129_residues
MLVSCASGLSSPLIPDYPEALTQDSIMDIQDTFPQRVWQIVASIPEGFVTTYGDVARLAGSPRAARQVGGVLKRLPEGST
LPWHRVVNRHGAISLTGPDLQRQRQALLAEGVVVSGSGQIDLQRYRWVY
>Mature_129_residues
MLVSCASGLSSPLIPDYPEALTQDSIMDIQDTFPQRVWQIVASIPEGFVTTYGDVARLAGSPRAARQVGGVLKRLPEGST
LPWHRVVNRHGAISLTGPDLQRQRQALLAEGVVVSGSGQIDLQRYRWVY

Specific function: Unknown

COG id: COG3695

COG function: function code L; Predicted methylated DNA-protein cysteine methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MGMT family [H]

Homologues:

Organism=Escherichia coli, GI1786659, Length=129, Percent_Identity=82.9457364341085, Blast_Score=222, Evalue=8e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014048
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01035 DNA_binding_1 [H]

EC number: NA

Molecular weight: Translated: 14113; Mature: 14113

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVSCASGLSSPLIPDYPEALTQDSIMDIQDTFPQRVWQIVASIPEGFVTTYGDVARLAG
CEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
SPRAARQVGGVLKRLPEGSTLPWHRVVNRHGAISLTGPDLQRQRQALLAEGVVVSGSGQI
CCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEECCCCHHHHHHHHHHCCEEECCCCCE
DLQRYRWVY
EHHCCCCCC
>Mature Secondary Structure
MLVSCASGLSSPLIPDYPEALTQDSIMDIQDTFPQRVWQIVASIPEGFVTTYGDVARLAG
CEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
SPRAARQVGGVLKRLPEGSTLPWHRVVNRHGAISLTGPDLQRQRQALLAEGVVVSGSGQI
CCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEECCCCHHHHHHHHHHCCEEECCCCCE
DLQRYRWVY
EHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]