| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
Click here to switch to the map view.
The map label for this gene is 16763649
Identifier: 16763649
GI number: 16763649
Start: 305731
End: 306726
Strand: Reverse
Name: 16763649
Synonym: STM0267
Alternate gene names: NA
Gene position: 306726-305731 (Counterclockwise)
Preceding gene: 16763650
Following gene: 16763648
Centisome position: 6.31
GC content: 60.04
Gene sequence:
>996_bases ATGACCGGCGCTCTCAACCAGGCGCAGAAAACCCCCTGGCGTTACGGATTCCTGAACCTGATGCGGCGCGTGGATGCCCA GCTCTGTGATACTCCGGCAGGCAGTATCTGGCAGCCACGGATGGAAAAATTCCGTCTGGGACAGACGCCGACGATGACCT TTGCGCCACGGGAAATCGCCCAGGTCAGCTGGCAGGATGGACGCCTGCACCTGAGCCTGTACAGCCTCGGACTATGGGGG CCAAACGGCCCGTTGCCGCTGCACTATACCGAGCTGGCACTGAACCGCTCAGAGAGTCGTCACGATCCGACGCTGGTTCA TTTTTCCAATATTTTTCACCACCGCTGGCTGACGCAGTTCTGGCAGGCATGGCGCAGCGCCCAGTCCGCTGGTGGCGGGC TGGACAAACCGGAACACGACCGTTTTGCGTTTTATATCGCCAGTCTCAGCGGGCAGGATCTACGGGAAAGCGCCGAAAGC CCGCTGTCAGATCATGTTCGCCTGGCAGCCTCCGCCCATCTGGTACGCGAATCGCGCAATCCTGACGGGCTGGCCGCCAC GCTGGCGCACTATTTCAGCGTACCTTTTGCGGTGAAAGAATTCGCCCTGCACTGGATAACGGTGGCGAACGATGAAATCA CCCGTCTGGGCACGCCCGCGCAGTCTTCGGTGCTGGGCAACGGGGCGCTTATCGGCCAGGCCGTACCGGATATGCAGTAC AAATTCCGGCTAATTATCGGCCCGCTCACGCTGGAGGATTACCTGCGTTTTCTGCCCGGCGGCAACAATCTGCCCGTGCT GACAGAACTGGTGCGTACGTTCATCGGTTTTGAATATTGCTGGGAAATTGAGCTGCAGTTGAAGCCTCATGCCGCACCGC CTGCGGTGATCGGCGGCGCGCAGCGGCTTGGCTGGACGGCCTGGGCAGGTAAAGCCATGCATGACCGTCCGGTGACCGGC ATGATTTTTGAACCTGAACACGGCTTAACCCACTGA
Upstream 100 bases:
>100_bases GCCATGTTTCCATTAATACCTTCTCGCAGATGACGCTGCACTCGATGCAACGCGGGCATGTCATGACCTGGCCGGTCAGA ACCGGGCAACGGGGGAGCGT
Downstream 100 bases:
>100_bases GAGTAATGATATGGACATGTCCCTGACTAAACCGGTAAGCGCGGAACAACCCTGCGGCCCCGATCCGGAGTACGATCCGG AATACCTGCTGCTGTTCAGC
Product: cytoplasmic protein
Products: NA
Alternate protein names: Type VI Secretion Protein Family; Cytoplasmic Protein; T6ss R; Type VI Secretion System Core Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpG; Periplasmic Chaperone Of Fimbral Assembly Machinery; Type VI Secretion System Protein ImpH; Quinoprotein Dehydrogenase; Conserved Protein; Type VI Secretion System Protein; Type VI Secretion Protein VasG; Secreted Protein; Cytoplasmic Protein SciB
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MTGALNQAQKTPWRYGFLNLMRRVDAQLCDTPAGSIWQPRMEKFRLGQTPTMTFAPREIAQVSWQDGRLHLSLYSLGLWG PNGPLPLHYTELALNRSESRHDPTLVHFSNIFHHRWLTQFWQAWRSAQSAGGGLDKPEHDRFAFYIASLSGQDLRESAES PLSDHVRLAASAHLVRESRNPDGLAATLAHYFSVPFAVKEFALHWITVANDEITRLGTPAQSSVLGNGALIGQAVPDMQY KFRLIIGPLTLEDYLRFLPGGNNLPVLTELVRTFIGFEYCWEIELQLKPHAAPPAVIGGAQRLGWTAWAGKAMHDRPVTG MIFEPEHGLTH
Sequences:
>Translated_331_residues MTGALNQAQKTPWRYGFLNLMRRVDAQLCDTPAGSIWQPRMEKFRLGQTPTMTFAPREIAQVSWQDGRLHLSLYSLGLWG PNGPLPLHYTELALNRSESRHDPTLVHFSNIFHHRWLTQFWQAWRSAQSAGGGLDKPEHDRFAFYIASLSGQDLRESAES PLSDHVRLAASAHLVRESRNPDGLAATLAHYFSVPFAVKEFALHWITVANDEITRLGTPAQSSVLGNGALIGQAVPDMQY KFRLIIGPLTLEDYLRFLPGGNNLPVLTELVRTFIGFEYCWEIELQLKPHAAPPAVIGGAQRLGWTAWAGKAMHDRPVTG MIFEPEHGLTH >Mature_330_residues TGALNQAQKTPWRYGFLNLMRRVDAQLCDTPAGSIWQPRMEKFRLGQTPTMTFAPREIAQVSWQDGRLHLSLYSLGLWGP NGPLPLHYTELALNRSESRHDPTLVHFSNIFHHRWLTQFWQAWRSAQSAGGGLDKPEHDRFAFYIASLSGQDLRESAESP LSDHVRLAASAHLVRESRNPDGLAATLAHYFSVPFAVKEFALHWITVANDEITRLGTPAQSSVLGNGALIGQAVPDMQYK FRLIIGPLTLEDYLRFLPGGNNLPVLTELVRTFIGFEYCWEIELQLKPHAAPPAVIGGAQRLGWTAWAGKAMHDRPVTGM IFEPEHGLTH
Specific function: Unknown
COG id: COG3520
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37134; Mature: 37003
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGALNQAQKTPWRYGFLNLMRRVDAQLCDTPAGSIWQPRMEKFRLGQTPTMTFAPREIA CCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEECCHHHH QVSWQDGRLHLSLYSLGLWGPNGPLPLHYTELALNRSESRHDPTLVHFSNIFHHRWLTQF HCCCCCCEEEEEEEEEEEECCCCCCCEEHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHH WQAWRSAQSAGGGLDKPEHDRFAFYIASLSGQDLRESAESPLSDHVRLAASAHLVRESRN HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCC PDGLAATLAHYFSVPFAVKEFALHWITVANDEITRLGTPAQSSVLGNGALIGQAVPDMQY CCHHHHHHHHHHCCCHHHHHHHHEEEEECCCCHHHCCCCCHHHHCCCCEEECCCCCCCCE KFRLIIGPLTLEDYLRFLPGGNNLPVLTELVRTFIGFEYCWEIELQLKPHAAPPAVIGGA EEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEEEEEECCCCCCCHHCCCH QRLGWTAWAGKAMHDRPVTGMIFEPEHGLTH HHCCCHHHCCCCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure TGALNQAQKTPWRYGFLNLMRRVDAQLCDTPAGSIWQPRMEKFRLGQTPTMTFAPREIA CCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEECCHHHH QVSWQDGRLHLSLYSLGLWGPNGPLPLHYTELALNRSESRHDPTLVHFSNIFHHRWLTQF HCCCCCCEEEEEEEEEEEECCCCCCCEEHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHH WQAWRSAQSAGGGLDKPEHDRFAFYIASLSGQDLRESAESPLSDHVRLAASAHLVRESRN HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCC PDGLAATLAHYFSVPFAVKEFALHWITVANDEITRLGTPAQSSVLGNGALIGQAVPDMQY CCHHHHHHHHHHCCCHHHHHHHHEEEEECCCCHHHCCCCCHHHHCCCCEEECCCCCCCCE KFRLIIGPLTLEDYLRFLPGGNNLPVLTELVRTFIGFEYCWEIELQLKPHAAPPAVIGGA EEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEEEEEECCCCCCCHHCCCH QRLGWTAWAGKAMHDRPVTGMIFEPEHGLTH HHCCCHHHCCCCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA