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The map label for this gene is 16763648

Identifier: 16763648

GI number: 16763648

Start: 304665

End: 305720

Strand: Reverse

Name: 16763648

Synonym: STM0266

Alternate gene names: NA

Gene position: 305720-304665 (Counterclockwise)

Preceding gene: 16763649

Following gene: 16763646

Centisome position: 6.29

GC content: 61.27

Gene sequence:

>1056_bases
ATGGACATGTCCCTGACTAAACCGGTAAGCGCGGAACAACCCTGCGGCCCCGATCCGGAGTACGATCCGGAATACCTGCT
GCTGTTCAGCCGCGCCGCCCCCCAGGCGGAGGCGCAATATGGTGATTTTGTCAGTACGCCGGAAGCCGTGAACTGGCCGG
AAATTGAACGTGATGCGCGCCGTCTGCTCACGCGCAGTAAGGATATCCGGGTGTTGATCCTGCTGCTGCGCAGTCGCATC
CAGCAGGCTGGCGCACAGGGACTGGCGGAAATGCTCACACAACTGGCAGAACTGAGCGTAATCTGGTCTGATGCACTCCA
TCCACAGCTGCTTACCGGCGAAGGCGCATCCGCAGAATCTATTGAAGATGCGTCGCTGGCGCGCAGTAATGCCCTGGCGG
CGCTGCTGGATCACGAAGGCGTGATGGCGGACATTCGCGGTATTACGCTGTCAAACAGTGCCGCCCTGCGCCTACAGGTA
CGGGATGTGGAGCGCGCGTTATCCGCTCCCCGCCCGGCTGATGCGCTGGCCCCCGAATCCGTCCGCCAGCAACTGGCCGA
CCTCGAAGCCCGTGGGGCATTACCGCTGGCGGCGTTTCGCGAAGCGCAGGAAAGCGCAGAACGCCTGCAAGTGTGGGCGC
GTGAGACATTAGGCGATCTGGCTCCAGATTTTTCACGCCTGCGGCAGTTGTTAGCGCTGCTGCCTGACGTGGTACAGACA
ACCACACCGGAAATCCCTCCGTCGCCAGCGCCAGTGCCAGACCCCGCAGGCACGGTTATGGATAATGCCGTTCCGGCACG
GGCAGAGGATGTGCCGCCTGTCAACGCGCCACCCGGTATATCCCTCCCACACAATGCTGAACCGGGGCCAATTCGCGATC
GTAATGATGCGCTGGAACGCCTGCGGTGCATTCGTCGCTGGTTTGAGAGCAGTGAACCCAGTAGCCCGACCATCCCACTG
TTACGCCAGGCTGAAAGACTGGTGGGAAAACGGTTCTCGGAGGTGATCAATGAGATCCCGGTGGAGTTGCTGGAGAAGTG
GGATGCCCTGGAGTGA

Upstream 100 bases:

>100_bases
CTTGGCTGGACGGCCTGGGCAGGTAAAGCCATGCATGACCGTCCGGTGACCGGCATGATTTTTGAACCTGAACACGGCTT
AACCCACTGAGAGTAATGAT

Downstream 100 bases:

>100_bases
TGATGCGCATGTCTGGCGGTTCTCCGTAATTATCTGAGTGATATCAACATTACGCAGTCTGCTTCTGCGCTGAACATGTC
CCGATCCCGGTTAAGCACCG

Product: cytoplasmic protein

Products: NA

Alternate protein names: Type VI Secretion-Associated Protein ImpA Family; Cytoplasmic Protein; ImpA Domain Protein; ImpA-Related N-Terminal Family Protein; ImpA Family Type VI Secretion-Associated Protein; Replication/Virulence Associated Protein; ImpA-Related N-Terminal Domain-Containing; T6ss A; ImpA-Like Protein

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MDMSLTKPVSAEQPCGPDPEYDPEYLLLFSRAAPQAEAQYGDFVSTPEAVNWPEIERDARRLLTRSKDIRVLILLLRSRI
QQAGAQGLAEMLTQLAELSVIWSDALHPQLLTGEGASAESIEDASLARSNALAALLDHEGVMADIRGITLSNSAALRLQV
RDVERALSAPRPADALAPESVRQQLADLEARGALPLAAFREAQESAERLQVWARETLGDLAPDFSRLRQLLALLPDVVQT
TTPEIPPSPAPVPDPAGTVMDNAVPARAEDVPPVNAPPGISLPHNAEPGPIRDRNDALERLRCIRRWFESSEPSSPTIPL
LRQAERLVGKRFSEVINEIPVELLEKWDALE

Sequences:

>Translated_351_residues
MDMSLTKPVSAEQPCGPDPEYDPEYLLLFSRAAPQAEAQYGDFVSTPEAVNWPEIERDARRLLTRSKDIRVLILLLRSRI
QQAGAQGLAEMLTQLAELSVIWSDALHPQLLTGEGASAESIEDASLARSNALAALLDHEGVMADIRGITLSNSAALRLQV
RDVERALSAPRPADALAPESVRQQLADLEARGALPLAAFREAQESAERLQVWARETLGDLAPDFSRLRQLLALLPDVVQT
TTPEIPPSPAPVPDPAGTVMDNAVPARAEDVPPVNAPPGISLPHNAEPGPIRDRNDALERLRCIRRWFESSEPSSPTIPL
LRQAERLVGKRFSEVINEIPVELLEKWDALE
>Mature_351_residues
MDMSLTKPVSAEQPCGPDPEYDPEYLLLFSRAAPQAEAQYGDFVSTPEAVNWPEIERDARRLLTRSKDIRVLILLLRSRI
QQAGAQGLAEMLTQLAELSVIWSDALHPQLLTGEGASAESIEDASLARSNALAALLDHEGVMADIRGITLSNSAALRLQV
RDVERALSAPRPADALAPESVRQQLADLEARGALPLAAFREAQESAERLQVWARETLGDLAPDFSRLRQLLALLPDVVQT
TTPEIPPSPAPVPDPAGTVMDNAVPARAEDVPPVNAPPGISLPHNAEPGPIRDRNDALERLRCIRRWFESSEPSSPTIPL
LRQAERLVGKRFSEVINEIPVELLEKWDALE

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38407; Mature: 38407

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMSLTKPVSAEQPCGPDPEYDPEYLLLFSRAAPQAEAQYGDFVSTPEAVNWPEIERDAR
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCHHHHHHH
RLLTRSKDIRVLILLLRSRIQQAGAQGLAEMLTQLAELSVIWSDALHPQLLTGEGASAES
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHH
IEDASLARSNALAALLDHEGVMADIRGITLSNSAALRLQVRDVERALSAPRPADALAPES
HHHHHHHHHHHHHHHHHCCCHHHHHCCEEECCCCEEEEHHHHHHHHHCCCCCCHHCCHHH
VRQQLADLEARGALPLAAFREAQESAERLQVWARETLGDLAPDFSRLRQLLALLPDVVQT
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TTPEIPPSPAPVPDPAGTVMDNAVPARAEDVPPVNAPPGISLPHNAEPGPIRDRNDALER
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LRCIRRWFESSEPSSPTIPLLRQAERLVGKRFSEVINEIPVELLEKWDALE
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDMSLTKPVSAEQPCGPDPEYDPEYLLLFSRAAPQAEAQYGDFVSTPEAVNWPEIERDAR
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCHHHHHHH
RLLTRSKDIRVLILLLRSRIQQAGAQGLAEMLTQLAELSVIWSDALHPQLLTGEGASAES
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHH
IEDASLARSNALAALLDHEGVMADIRGITLSNSAALRLQVRDVERALSAPRPADALAPES
HHHHHHHHHHHHHHHHHCCCHHHHHCCEEECCCCEEEEHHHHHHHHHCCCCCCHHCCHHH
VRQQLADLEARGALPLAAFREAQESAERLQVWARETLGDLAPDFSRLRQLLALLPDVVQT
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TTPEIPPSPAPVPDPAGTVMDNAVPARAEDVPPVNAPPGISLPHNAEPGPIRDRNDALER
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LRCIRRWFESSEPSSPTIPLLRQAERLVGKRFSEVINEIPVELLEKWDALE
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA