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The map label for this gene is stiA [C]

Identifier: 16763567

GI number: 16763567

Start: 208383

End: 208922

Strand: Reverse

Name: stiA [C]

Synonym: STM0177

Alternate gene names: 16763567

Gene position: 208922-208383 (Counterclockwise)

Preceding gene: 16763570

Following gene: 16763566

Centisome position: 4.3

GC content: 52.41

Gene sequence:

>540_bases
ATGAAACTCTCCTTAAAAACACTCACTGTGGCACTGGCCGCCATCACCCTCTCCCCCGCCGCGCTGGCAGACACCGCCAA
AGACGGCACCGTACATATCACCGGCCTCATTAAGCAAAACGCCTGTACGGTAAAAACGGATTCAGTAGAGGTGACATTAC
AGGAAGAATTTGCCTCTCTTTTCACTGCCGCAGGGCAGACGGCAGGGGATACAGACTTCACCATCGAACTCGAAAACTGC
GACGCAAACGTCTACAGCAGTGTACAGGCGCGCTTTGAAGGCACACTCGACGGAACCGATGCGACCATCCTGAAAAATGA
GGATGATGCTGAGAATATTGGCGTGCAAATTCTTGATAAAACTAGCACCCCTATGACCTTTAACGATCTTCAGGCATGGT
CTGCCCCAGTCAACCTCCCTACAGCAGAGGGGGTGACGGAACTCTCAATGCCTTTCACCGCCCGCTATATCGCCACCGCG
GTTCCCGTTAAGTCGGGAACGGTCGATGCAACCGCAACATTCTATCTGCAATATAACTGA

Upstream 100 bases:

>100_bases
ATTATATTTACTCATTCGGGAATAAAAAGAACAATAACTTTCCACACTATAGATATTGTTACTATGTCAATATTTATAAT
ATCTTAAAGGATCAAAGATA

Downstream 100 bases:

>100_bases
TCCTGGTGGCCAGCGTCGGCTGGCCCCTTTGTTTATTGAGGTCATCAATGAATTCATTGGCTAAAGCAGGGTTGCTTTGT
TGCCTGTTGTGCGGTTCGCT

Product: fimbrial subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKLSLKTLTVALAAITLSPAALADTAKDGTVHITGLIKQNACTVKTDSVEVTLQEEFASLFTAAGQTAGDTDFTIELENC
DANVYSSVQARFEGTLDGTDATILKNEDDAENIGVQILDKTSTPMTFNDLQAWSAPVNLPTAEGVTELSMPFTARYIATA
VPVKSGTVDATATFYLQYN

Sequences:

>Translated_179_residues
MKLSLKTLTVALAAITLSPAALADTAKDGTVHITGLIKQNACTVKTDSVEVTLQEEFASLFTAAGQTAGDTDFTIELENC
DANVYSSVQARFEGTLDGTDATILKNEDDAENIGVQILDKTSTPMTFNDLQAWSAPVNLPTAEGVTELSMPFTARYIATA
VPVKSGTVDATATFYLQYN
>Mature_179_residues
MKLSLKTLTVALAAITLSPAALADTAKDGTVHITGLIKQNACTVKTDSVEVTLQEEFASLFTAAGQTAGDTDFTIELENC
DANVYSSVQARFEGTLDGTDATILKNEDDAENIGVQILDKTSTPMTFNDLQAWSAPVNLPTAEGVTELSMPFTARYIATA
VPVKSGTVDATATFYLQYN

Specific function: Involved In Regulation Of Length And Mediation Of Adhesion Of Type 1 Fimbriae (But Not Necessary For The Production Of Fimbriae). Involved In The Integration Of Fimh In The Fimbriae. [C]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1790773, Length=158, Percent_Identity=33.5443037974684, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1787781, Length=157, Percent_Identity=31.8471337579618, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI87081753, Length=170, Percent_Identity=33.5294117647059, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI1790769, Length=159, Percent_Identity=34.5911949685535, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87081805, Length=158, Percent_Identity=32.2784810126582, Blast_Score=64, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18978; Mature: 18978

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSLKTLTVALAAITLSPAALADTAKDGTVHITGLIKQNACTVKTDSVEVTLQEEFASL
CEEEHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEEEEECCCEEEEECCEEEEEHHHHHHH
FTAAGQTAGDTDFTIELENCDANVYSSVQARFEGTLDGTDATILKNEDDAENIGVQILDK
HHHCCCCCCCCEEEEEEECCCCHHHHHHHHEECCCCCCCCEEEEECCCCCCCCCEEEEEC
TSTPMTFNDLQAWSAPVNLPTAEGVTELSMPFTARYIATAVPVKSGTVDATATFYLQYN
CCCCCEECCHHHCCCCCCCCCCCCCEECCCCCCEEEHEEECCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MKLSLKTLTVALAAITLSPAALADTAKDGTVHITGLIKQNACTVKTDSVEVTLQEEFASL
CEEEHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEEEEECCCEEEEECCEEEEEHHHHHHH
FTAAGQTAGDTDFTIELENCDANVYSSVQARFEGTLDGTDATILKNEDDAENIGVQILDK
HHHCCCCCCCCEEEEEEECCCCHHHHHHHHEECCCCCCCCEEEEECCCCCCCCCEEEEEC
TSTPMTFNDLQAWSAPVNLPTAEGVTELSMPFTARYIATAVPVKSGTVDATATFYLQYN
CCCCCEECCHHHCCCCCCCCCCCCCEECCCCCCEEEHEEECCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2890624 [H]