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The map label for this gene is ygbK [C]

Identifier: 16763552

GI number: 16763552

Start: 191150

End: 192421

Strand: Direct

Name: ygbK [C]

Synonym: STM0162

Alternate gene names: 16763552

Gene position: 191150-192421 (Clockwise)

Preceding gene: 16763551

Following gene: 16763553

Centisome position: 3.94

GC content: 57.78

Gene sequence:

>1272_bases
ATGAAAATGATAGTTATCGCCGATGATTTTACCGGATCGAATGATACCGGCGTCCAGTTGGCGAAGAAGGGGGCGAGAAC
GGAAGTCATGTTGAGCGCGTCGCAAAAACCGTCCCGCCGCGCCGATGTGTTAGTCATTAACACCGAAAGCCGGGCGATGC
CCGCAGATCAGGCGGCATCTGCCGTTTATGCCGCGCTTTCGCCGTGGTGTGAGACATCGCCAGCGCCGCTGGTGTACAAA
AAAATCGACTCCACATTTCGCGGCAATATCGGCGCCGAAGTGACGGCGGCCATGCGCGCCAGTCAGCGAAAACTGGCCGT
TATCGCCGCCGCGATCCCTGCGGCCGGACGCACGACGCTTGAAGGAAAATGTCTGGTTAATGGCGTCCCGCTACTGGAAA
CCGAATTTGCCAGCGATCCGAAAACGCCCATTGTCTCTTCCCGTATTGCCGAGATAGTGGCGTTGCAAAGTGAGATCCCT
GTGTATGAAGTCTTTTTGCAGGATGTCCGACGCGGCGGGTTAAGCGCCTTACTTACGGCTTATGCGGCTGAGGGCGAAGG
GATTATCGTCGTGGATGCGGTGGAAGAGCGGGACCTGACGTTGATTGCGCAAGCGGCGTGTGAACAACCGTCGATGCCGC
TGCTCGTCGGCGCAGCGGGTCTGGCGAATGCGTTGCCGGTTGAACTTTTTATGCAAGACCGGCAGCGGCTGCCGGTGCTG
GTGGTGGCCGGTTCGATGAGCGAAGCCACGCGACGTCAGGTGGATAATGCGCTGTGCCGGGGACGTGCGGAGGTCGTGGA
TATCGATGCCGCGCGCATGGTGTCGGATAGCGCGGAACAGGAAATCGCGTCTGTCGTAGAGCAGGCCTGCGCGCTGTTAA
GTCAGCATCGACATACGATTTTACGCACCAGCCGTCGCGCAGAAGATCGACAGTTAATCGACGCGTTGTGCGAAAAATCC
GCGATGAGCCGTCAGCAATTGGGCGAGCGACTGAGCCAGCGGCTTGGCGTCGTCACGTTAAACATTATCGAGCAGGCGCG
GATTGGCGGGCTGTTTCTGACCGGCGGCGATATCGCAACCGCCGTCGCCGGCGCGCTTGGCGCTGAAGGTTATCGCATTC
AGAGCGAGGTGGCGCCCTGTATTCCCTGTGGAACGTTTGTAAACAGCGAAATTGACGATCTGCCGGTCATTACCAAAGCG
GGCGGATTCGGTTCAGACAGTACGTTGTGTGACGCGCTTTATTATATTGAGGAGATGTATTGTGGAGACTAA

Upstream 100 bases:

>100_bases
TGATTGCCGCCTCGGTGATCACCACGGCAATCCTGACGCCAGTGTTGACCTCCTGGGTTGCGAAAAAACAGGCGCGTCAG
GCTTCTTTGGAGAAAAACGC

Downstream 100 bases:

>100_bases
AACCGTTGCCATTACCATGGGCGATCCAGCGGGCATTGGGCCGGAAATTATTGTTAAAGCGCTAAGCGAAGACGGTCTCA
ACGGCGCGCCGCTGGTGGTT

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MKMIVIADDFTGSNDTGVQLAKKGARTEVMLSASQKPSRRADVLVINTESRAMPADQAASAVYAALSPWCETSPAPLVYK
KIDSTFRGNIGAEVTAAMRASQRKLAVIAAAIPAAGRTTLEGKCLVNGVPLLETEFASDPKTPIVSSRIAEIVALQSEIP
VYEVFLQDVRRGGLSALLTAYAAEGEGIIVVDAVEERDLTLIAQAACEQPSMPLLVGAAGLANALPVELFMQDRQRLPVL
VVAGSMSEATRRQVDNALCRGRAEVVDIDAARMVSDSAEQEIASVVEQACALLSQHRHTILRTSRRAEDRQLIDALCEKS
AMSRQQLGERLSQRLGVVTLNIIEQARIGGLFLTGGDIATAVAGALGAEGYRIQSEVAPCIPCGTFVNSEIDDLPVITKA
GGFGSDSTLCDALYYIEEMYCGD

Sequences:

>Translated_423_residues
MKMIVIADDFTGSNDTGVQLAKKGARTEVMLSASQKPSRRADVLVINTESRAMPADQAASAVYAALSPWCETSPAPLVYK
KIDSTFRGNIGAEVTAAMRASQRKLAVIAAAIPAAGRTTLEGKCLVNGVPLLETEFASDPKTPIVSSRIAEIVALQSEIP
VYEVFLQDVRRGGLSALLTAYAAEGEGIIVVDAVEERDLTLIAQAACEQPSMPLLVGAAGLANALPVELFMQDRQRLPVL
VVAGSMSEATRRQVDNALCRGRAEVVDIDAARMVSDSAEQEIASVVEQACALLSQHRHTILRTSRRAEDRQLIDALCEKS
AMSRQQLGERLSQRLGVVTLNIIEQARIGGLFLTGGDIATAVAGALGAEGYRIQSEVAPCIPCGTFVNSEIDDLPVITKA
GGFGSDSTLCDALYYIEEMYCGD
>Mature_423_residues
MKMIVIADDFTGSNDTGVQLAKKGARTEVMLSASQKPSRRADVLVINTESRAMPADQAASAVYAALSPWCETSPAPLVYK
KIDSTFRGNIGAEVTAAMRASQRKLAVIAAAIPAAGRTTLEGKCLVNGVPLLETEFASDPKTPIVSSRIAEIVALQSEIP
VYEVFLQDVRRGGLSALLTAYAAEGEGIIVVDAVEERDLTLIAQAACEQPSMPLLVGAAGLANALPVELFMQDRQRLPVL
VVAGSMSEATRRQVDNALCRGRAEVVDIDAARMVSDSAEQEIASVVEQACALLSQHRHTILRTSRRAEDRQLIDALCEKS
AMSRQQLGERLSQRLGVVTLNIIEQARIGGLFLTGGDIATAVAGALGAEGYRIQSEVAPCIPCGTFVNSEIDDLPVITKA
GGFGSDSTLCDALYYIEEMYCGD

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygbK [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=403, Percent_Identity=28.287841191067, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 44986; Mature: 44986

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMIVIADDFTGSNDTGVQLAKKGARTEVMLSASQKPSRRADVLVINTESRAMPADQAAS
CEEEEEECCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHH
AVYAALSPWCETSPAPLVYKKIDSTFRGNIGAEVTAAMRASQRKLAVIAAAIPAAGRTTL
HHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCHHEEEEEECCCCCCCCCC
EGKCLVNGVPLLETEFASDPKTPIVSSRIAEIVALQSEIPVYEVFLQDVRRGGLSALLTA
CCEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHH
YAAEGEGIIVVDAVEERDLTLIAQAACEQPSMPLLVGAAGLANALPVELFMQDRQRLPVL
HHCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCEEEECCHHHHCCHHHHHHHHHCCCCEE
VVAGSMSEATRRQVDNALCRGRAEVVDIDAARMVSDSAEQEIASVVEQACALLSQHRHTI
EEECCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
LRTSRRAEDRQLIDALCEKSAMSRQQLGERLSQRLGVVTLNIIEQARIGGLFLTGGDIAT
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHCEEEEECCHHHH
AVAGALGAEGYRIQSEVAPCIPCGTFVNSEIDDLPVITKAGGFGSDSTLCDALYYIEEMY
HHHHHHCCCCEEECCCCCCCCCCCHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH
CGD
CCC
>Mature Secondary Structure
MKMIVIADDFTGSNDTGVQLAKKGARTEVMLSASQKPSRRADVLVINTESRAMPADQAAS
CEEEEEECCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHH
AVYAALSPWCETSPAPLVYKKIDSTFRGNIGAEVTAAMRASQRKLAVIAAAIPAAGRTTL
HHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCHHEEEEEECCCCCCCCCC
EGKCLVNGVPLLETEFASDPKTPIVSSRIAEIVALQSEIPVYEVFLQDVRRGGLSALLTA
CCEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHH
YAAEGEGIIVVDAVEERDLTLIAQAACEQPSMPLLVGAAGLANALPVELFMQDRQRLPVL
HHCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCEEEECCHHHHCCHHHHHHHHHCCCCEE
VVAGSMSEATRRQVDNALCRGRAEVVDIDAARMVSDSAEQEIASVVEQACALLSQHRHTI
EEECCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
LRTSRRAEDRQLIDALCEKSAMSRQQLGERLSQRLGVVTLNIIEQARIGGLFLTGGDIAT
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHCEEEEECCHHHH
AVAGALGAEGYRIQSEVAPCIPCGTFVNSEIDDLPVITKAGGFGSDSTLCDALYYIEEMY
HHHHHHCCCCEEECCCCCCCCCCCHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH
CGD
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]