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The map label for this gene is yacL

Identifier: 16763550

GI number: 16763550

Start: 189603

End: 189965

Strand: Direct

Name: yacL

Synonym: STM0160

Alternate gene names: 16763550

Gene position: 189603-189965 (Clockwise)

Preceding gene: 16763548

Following gene: 16763551

Centisome position: 3.9

GC content: 51.79

Gene sequence:

>363_bases
ATGGATTACGAATTTCTGCGCGACGTTACCGGAGGGGTAAAAGTACGAATGTCGATGGGCCACGAGGTGGTCGGTCACTG
GTTTAATGAAGAGGTTAAAGACAACCTCTCGCTACTGGATGAAGTAGAACAAGCCGCGCGTACGGTCAAAGGCAGCGAAC
GCTCCTGGCAACGAGCAGGGCATGAATACACGATCTGGATGGACGGCGAAGAAGTGATGATTCGCGCCAATCAACTGGAT
TTTTCCGGCGATGAGATGGAAGAGGGGATGAGTTATTACGATGAAGAGAGTTTATCCCTGTGCGGCATGGAGGATTTTCT
GCGGGTCGTCGCCGCGTATCGGGAATTCGTCAGTAAAGCCTGA

Upstream 100 bases:

>100_bases
GACAATTAGACGTATCCACTTTTTTTCCTCTACATAGCTGCGATAATTACCCATAGGTACAATGCAGCGGTGACGCATTG
CCTTTGTAGAGGAACAGATC

Downstream 100 bases:

>100_bases
CCCTCTCTTCGTTATTGTCCCACAACGCCAGTCGACGGACAGTTGGGGGCGGTAGTGGAAACGAAGTCGCCAAACATTCC
AGCCGGGAGTATCCCGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MDYEFLRDVTGGVKVRMSMGHEVVGHWFNEEVKDNLSLLDEVEQAARTVKGSERSWQRAGHEYTIWMDGEEVMIRANQLD
FSGDEMEEGMSYYDEESLSLCGMEDFLRVVAAYREFVSKA

Sequences:

>Translated_120_residues
MDYEFLRDVTGGVKVRMSMGHEVVGHWFNEEVKDNLSLLDEVEQAARTVKGSERSWQRAGHEYTIWMDGEEVMIRANQLD
FSGDEMEEGMSYYDEESLSLCGMEDFLRVVAAYREFVSKA
>Mature_120_residues
MDYEFLRDVTGGVKVRMSMGHEVVGHWFNEEVKDNLSLLDEVEQAARTVKGSERSWQRAGHEYTIWMDGEEVMIRANQLD
FSGDEMEEGMSYYDEESLSLCGMEDFLRVVAAYREFVSKA

Specific function: Unknown

COG id: COG3112

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0231 family

Homologues:

Organism=Escherichia coli, GI87081687, Length=119, Percent_Identity=85.7142857142857, Blast_Score=218, Evalue=7e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YACL_SALA4 (B5F808)

Other databases:

- EMBL:   CP001138
- RefSeq:   YP_002145158.1
- PRIDE:   B5F808
- GeneID:   6792753
- GenomeReviews:   CP001138_GR
- KEGG:   sea:SeAg_B0191
- HOGENOM:   HBG679736
- OMA:   KGSERQW
- ProtClustDB:   PRK05248
- HAMAP:   MF_01053
- InterPro:   IPR008249
- PIRSF:   PIRSF006287
- ProDom:   PD020773

Pfam domain/function: PF06062 UPF0231

EC number: NA

Molecular weight: Translated: 13889; Mature: 13889

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYEFLRDVTGGVKVRMSMGHEVVGHWFNEEVKDNLSLLDEVEQAARTVKGSERSWQRAG
CCHHHHHHCCCCEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC
HEYTIWMDGEEVMIRANQLDFSGDEMEEGMSYYDEESLSLCGMEDFLRVVAAYREFVSKA
CEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDYEFLRDVTGGVKVRMSMGHEVVGHWFNEEVKDNLSLLDEVEQAARTVKGSERSWQRAG
CCHHHHHHCCCCEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC
HEYTIWMDGEEVMIRANQLDFSGDEMEEGMSYYDEESLSLCGMEDFLRVVAAYREFVSKA
CEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA