| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is imp [H]
Identifier: 16763483
GI number: 16763483
Start: 105810
End: 108170
Strand: Reverse
Name: imp [H]
Synonym: STM0093
Alternate gene names: 16763483
Gene position: 108170-105810 (Counterclockwise)
Preceding gene: 16763485
Following gene: 16763482
Centisome position: 2.23
GC content: 52.77
Gene sequence:
>2361_bases ATGAAAAAACGTATTCCCACTCTTCTGGCCACCATGATCGCCAGCGCCCTTTATAGTCATCAGGGGCTGGCAGCCGATCT CGCCTCACAGTGTATGTTGGGCGTGCCGAGCTACGATCGTCCTCTGGTAAAAGGCGATACCAACGATCTGCCGGTTACTA TCAATGCCGATAACGCTAAAGGTAACTACCCGGACGATGCCGTTTTTACCGGCAACGTGGACATTATGCAGGGGAATAGC CGCCTGCAAGCGGATGAAGTGCAGCTTCATCAGAAGCAGGCGGAAGGTCAGCCGGAACCTGTACGCACCGTCGATGCGCT GGGTAATGTGCATTATGATGACAATCAGGTCATCCTTAAAGGGCCGAAGGGCTGGGCGAACCTGAACACCAAAGACACGA ACGTCTGGGAAGGCGATTACCAGATGGTGGGCCGTCAGGGGCGCGGTAAAGCCGATCTCATGAAGCAGCGCGGCGAAAAC CGCTATACCATTCTGGAAAACGGCAGCTTTACCTCCTGTCTGCCTGGCTCCGATACCTGGAGCGTGGTGGGGAGTGAAGT CATCCATGACCGCGAAGAACAGGTTGCGGAGATCTGGAACGCCCGGTTTAAAGTAGGTCCGGTTCCGATCTTTTATAGCC CCTATTTACAGCTACCCGTCGGTGACAAGCGTCGCTCAGGTTTCCTGATCCCGAACGCGAAATACACGACCAAGAACTAT TTCGAGTTCTACTTACCGTATTACTGGAACATCGCGCCCAATATGGACGCCACCATCACCCCGCACTATATGCACCGCCG CGGCAATATTATGTGGGAGAACGAATTCCGTTATCTCACGCAGGCAGGCGAGGGAGTGATGGAATTAGATTATCTGCCTT CTGATAAAGTCTACGAGGACGATCACCCCAAAGAGGGCGATAAGCACCGCTGGTTATTCTACTGGCAGCACTCAGGCGTG ATGGATCAGGTGTGGCGTTTTAACGTCGATTACACCAAAGTCAGCGACTCCAGCTACTTTAACGATTTCGACAGTAAGTA CGGTTCCAGTACCGACGGCTACGCAACGCAGAAATTCAGCGTCGGCTACGCCGTACAAAACTTTGACGCTACGGTGTCGA CCAAACAATTCCAGGTCTTTAACGATCAAAACACCAGCAGCTATTCAGCGGAGCCGCAGTTAGACGTTAACTACTACCAT AACGATCTCGGCCCGTTTGATACCCGGATTTACGGCCAGGCGGTGCACTTTGTTAACACCAAAGACAATATGCCGGAAGC GACCCGCGTCCACCTGGAGCCAACCATCAATTTGCCGCTCTCCAACCGCTGGGGCAGCCTGAACACCGAAGCGAAGCTGA TGGCGACGCACTATCAGCAAACGAATCTGGACAGCTATAACAGCGATCCAAACAATAAAAATAAGCTGGAAGATTCGGTT AACCGCGTCATGCCGCAGTTTAAAGTCGACGGTAAGCTCATCTTCGAACGCGATATGGCGATGCTGGCGCCGGGGTATAC CCAGACGCTGGAACCACGCGTGCAGTACCTGTATGTGCCGTACCGCGACCAGAGCGGCATCTATAACTACGATTCTTCTT TGCTGCAATCCGACTATAACGGCCTGTTCCGCGACCGCACTTATGGCGGTCTCGACCGTATTGCTTCCGCCAACCAGGTC ACAACCGGCGTCACAACACGCATTTATGATGATGCCGCCGTTGAACGTTTTAACGTTTCTGTTGGTCAAATCTACTATTT CACGGAGTCTCGCACCGGCGATGACAACATTAAATGGGAGAATGACGACAAAACCGGTTCGCTGGTTTGGGCAGGCGACA CTTACTGGCGTATTTCAGAACGCTGGGGGCTGCGTAGCGGAGTGCAGTACGATACCCGTCTGGATAGCGTCGCTACCAGC AGCAGCAGCCTCGAATACCGTCGGGATCAGGATCGTCTGGTACAGTTGAACTACCGCTATGCCAGCCCGGAATATATTCA GGCTACGTTGCCTTCGTATTATTCCACGGCAGAGCAGTATAAAAACGGCATCAATCAGGTGGGCGCGGTGGCAAGTTGGC CGATTGCCGATCGCTGGTCGATTGTCGGCGCGTACTACTTCGATACCAATTCGAGCAAACCTGCAGACCAGATGCTCGGC TTGCAGTACAACTCTTGCTGCTATGCGATCCGCGTCGGATACGAACGTAAGCTGAACGGTTGGGATAACGATAAACAACA CGCGATTTATGATAACGCGATTGGCTTCAACATTGAGCTGCGCGGTTTGAGCTCTAACTACGGCCTCGGCACGCAAGAAA TGTTGCGTTCGAACATTCTGCCGTACCAAAGCTCTATGTAA
Upstream 100 bases:
>100_bases AAACGGCAGGATTAACACTGGCGCAGCGAAGATGAGTAAGTTAGGCTGTGACCGTTTGTCACGCGCAACGCTACCGATGA TGGAACAATAAATACAACGT
Downstream 100 bases:
>100_bases TCTGATTGATTTACAACGTAATCCGCATTGCGGTTAATTGAAATGGAAAAAGTATGAAGAACTGGAAAACGCTGCTTCTC GGTATCGCCATGATCGCGAA
Product: organic solvent tolerance protein
Products: NA
Alternate protein names: Organic solvent tolerance protein [H]
Number of amino acids: Translated: 786; Mature: 786
Protein sequence:
>786_residues MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVKGDTNDLPVTINADNAKGNYPDDAVFTGNVDIMQGNS RLQADEVQLHQKQAEGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN RYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLTQAGEGVMELDYLPSDKVYEDDHPKEGDKHRWLFYWQHSGV MDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFSVGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVNYYH NDLGPFDTRIYGQAVHFVNTKDNMPEATRVHLEPTINLPLSNRWGSLNTEAKLMATHYQQTNLDSYNSDPNNKNKLEDSV NRVMPQFKVDGKLIFERDMAMLAPGYTQTLEPRVQYLYVPYRDQSGIYNYDSSLLQSDYNGLFRDRTYGGLDRIASANQV TTGVTTRIYDDAAVERFNVSVGQIYYFTESRTGDDNIKWENDDKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATS SSSLEYRRDQDRLVQLNYRYASPEYIQATLPSYYSTAEQYKNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLG LQYNSCCYAIRVGYERKLNGWDNDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQSSM
Sequences:
>Translated_786_residues MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVKGDTNDLPVTINADNAKGNYPDDAVFTGNVDIMQGNS RLQADEVQLHQKQAEGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN RYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLTQAGEGVMELDYLPSDKVYEDDHPKEGDKHRWLFYWQHSGV MDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFSVGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVNYYH NDLGPFDTRIYGQAVHFVNTKDNMPEATRVHLEPTINLPLSNRWGSLNTEAKLMATHYQQTNLDSYNSDPNNKNKLEDSV NRVMPQFKVDGKLIFERDMAMLAPGYTQTLEPRVQYLYVPYRDQSGIYNYDSSLLQSDYNGLFRDRTYGGLDRIASANQV TTGVTTRIYDDAAVERFNVSVGQIYYFTESRTGDDNIKWENDDKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATS SSSLEYRRDQDRLVQLNYRYASPEYIQATLPSYYSTAEQYKNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLG LQYNSCCYAIRVGYERKLNGWDNDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQSSM >Mature_786_residues MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVKGDTNDLPVTINADNAKGNYPDDAVFTGNVDIMQGNS RLQADEVQLHQKQAEGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN RYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLTQAGEGVMELDYLPSDKVYEDDHPKEGDKHRWLFYWQHSGV MDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFSVGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVNYYH NDLGPFDTRIYGQAVHFVNTKDNMPEATRVHLEPTINLPLSNRWGSLNTEAKLMATHYQQTNLDSYNSDPNNKNKLEDSV NRVMPQFKVDGKLIFERDMAMLAPGYTQTLEPRVQYLYVPYRDQSGIYNYDSSLLQSDYNGLFRDRTYGGLDRIASANQV TTGVTTRIYDDAAVERFNVSVGQIYYFTESRTGDDNIKWENDDKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATS SSSLEYRRDQDRLVQLNYRYASPEYIQATLPSYYSTAEQYKNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLG LQYNSCCYAIRVGYERKLNGWDNDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQSSM
Specific function: Together with lptE, is involved in the assembly of LPS in the outer leaflet of the outer membrane. Determines N-hexane tolerance and is involved in outer membrane permeability. Essential for envelope biogenesis [H]
COG id: COG1452
COG function: function code M; Organic solvent tolerance protein OstA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lptD family [H]
Homologues:
Organism=Escherichia coli, GI1786239, Length=786, Percent_Identity=91.0941475826972, Blast_Score=1510, Evalue=0.0,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020889 - InterPro: IPR005653 - InterPro: IPR007543 [H]
Pfam domain/function: PF03968 OstA; PF04453 OstA_C [H]
EC number: NA
Molecular weight: Translated: 89872; Mature: 89872
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVKGDTNDLPVTINADNAK CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCEECCCCCCCCEEEECCCCC GNYPDDAVFTGNVDIMQGNSRLQADEVQLHQKQAEGQPEPVRTVDALGNVHYDDNQVILK CCCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCEECCCEEEEE GPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILENGSFTSCLPGSDTW CCCCCCCCCCCCCEEECCHHHHCCCCCCCHHHHHHHCCCCCEEEEECCCCCEECCCCCCH SVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY HHHHHHHHHCHHHHHHHHHCCCEEECCEEEEECCEEECCCCCCCCCCEECCCCCCCCCCE FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLTQAGEGVMELDYLPSDKVYED EEEEEEEEEEECCCCCCEECHHHHHHCCCEEEECCHHHHHHCCCCEEEEECCCCCCCCCC DHPKEGDKHRWLFYWQHSGVMDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFS CCCCCCCCCEEEEEEECCCCHHHHHEECCCEEEECCCCHHCHHHHHCCCCCCCCEEEEEE VGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVNYYHNDLGPFDTRIYGQAVHFVNT ECEEEECCCCEEECEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHEEEEEEEEEEC KDNMPEATRVHLEPTINLPLSNRWGSLNTEAKLMATHYQQTNLDSYNSDPNNKNKLEDSV CCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCCHHHHHHHH NRVMPQFKVDGKLIFERDMAMLAPGYTQTLEPRVQYLYVPYRDQSGIYNYDSSLLQSDYN HHHCCCEECCCEEEEECCHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHC GLFRDRTYGGLDRIASANQVTTGVTTRIYDDAAVERFNVSVGQIYYFTESRTGDDNIKWE CCCCCCCCCCHHHHCCCCCEECCCEEEEECCHHHHEECCEEEEEEEEECCCCCCCCCEEC NDDKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATSSSSLEYRRDQDRLVQLNYRY CCCCCCCEEECCCCEEEEEHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEE ASPEYIQATLPSYYSTAEQYKNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLG CCCHHEEECCCHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEEEEECCCCCCHHHHHC LQYNSCCYAIRVGYERKLNGWDNDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNIL CEECCEEEEEEECCEEECCCCCCCCCCEEECCCEEEEEEEEECCCCCCCCHHHHHHHCCC PYQSSM CCCCCC >Mature Secondary Structure MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVKGDTNDLPVTINADNAK CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCEECCCCCCCCEEEECCCCC GNYPDDAVFTGNVDIMQGNSRLQADEVQLHQKQAEGQPEPVRTVDALGNVHYDDNQVILK CCCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCEECCCEEEEE GPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILENGSFTSCLPGSDTW CCCCCCCCCCCCCEEECCHHHHCCCCCCCHHHHHHHCCCCCEEEEECCCCCEECCCCCCH SVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY HHHHHHHHHCHHHHHHHHHCCCEEECCEEEEECCEEECCCCCCCCCCEECCCCCCCCCCE FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLTQAGEGVMELDYLPSDKVYED EEEEEEEEEEECCCCCCEECHHHHHHCCCEEEECCHHHHHHCCCCEEEEECCCCCCCCCC DHPKEGDKHRWLFYWQHSGVMDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFS CCCCCCCCCEEEEEEECCCCHHHHHEECCCEEEECCCCHHCHHHHHCCCCCCCCEEEEEE VGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVNYYHNDLGPFDTRIYGQAVHFVNT ECEEEECCCCEEECEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHEEEEEEEEEEC KDNMPEATRVHLEPTINLPLSNRWGSLNTEAKLMATHYQQTNLDSYNSDPNNKNKLEDSV CCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCCHHHHHHHH NRVMPQFKVDGKLIFERDMAMLAPGYTQTLEPRVQYLYVPYRDQSGIYNYDSSLLQSDYN HHHCCCEECCCEEEEECCHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHC GLFRDRTYGGLDRIASANQVTTGVTTRIYDDAAVERFNVSVGQIYYFTESRTGDDNIKWE CCCCCCCCCCHHHHCCCCCEECCCEEEEECCHHHHEECCEEEEEEEEECCCCCCCCCEEC NDDKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATSSSSLEYRRDQDRLVQLNYRY CCCCCCCEEECCCCEEEEEHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEE ASPEYIQATLPSYYSTAEQYKNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLG CCCHHEEECCCHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEEEEECCCCCCHHHHHC LQYNSCCYAIRVGYERKLNGWDNDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNIL CEECCEEEEEEECCEEECCCCCCCCCCEEECCCEEEEEEEEECCCCCCCCHHHHHHHCCC PYQSSM CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA