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The map label for this gene is yaaU [H]

Identifier: 16763469

GI number: 16763469

Start: 92178

End: 93518

Strand: Direct

Name: yaaU [H]

Synonym: STM0079

Alternate gene names: 16763469

Gene position: 92178-93518 (Clockwise)

Preceding gene: 16763468

Following gene: 16763470

Centisome position: 1.9

GC content: 54.14

Gene sequence:

>1341_bases
ATGCAGCAGCCCAGGAACTTTGATGACCTTAAATTCTCCTCCATTCATCGCAGAATTATGCTGTGGGGAAGCGGCGGCCC
GTTCCTTGATGGCTACGTGCTGGTGATCATTGGCGTGGCGCTGGAACAACTGACGCCGCTATTGCACCTTGATGCTGAAT
GGATTGGCGCGCTCGGCGCGGCTACGCTTGCCGGACTGTTTATCGGCACCTCGTTGTTTGGCTATATTTGCGATAAAGTC
GGGCGGCGTAAAATGTTCCTGCTTGATATTATCGCTATCGGCGTTATCTCCGTGGCGACCATGTTTGTTTCCACGCCGCT
TGAATTACTGGTGATGCGCGTTTTAATTGGCATTGTTATCGGCGCGGATTACCCTATCGCTACTTCCATGATTACGGAGT
TTTCCAACACCCGCCAGCGCGCGTTCTCCATCGGTTTTATCGCCGCGATGTGGTACGTCGGCGCGACCTGCGCCAACCTG
GTGGGCTACTGGCTGTATGACATGGAAGGCGGCTGGCGTTGGATGCTTGGCAGCGCCTTTATCCCGTGCTTAATCATTTT
GATTGGCCGCTTTGACCTGCCGGAATCGCCACGCTGGCTATTGCGAAAAGGACGGGTAAAAGAGTGCGAACAAATGATGA
TCAAACTGTTCGGCGAACCGGTCTGCTTTGACGATGAGCTGCCGCAGGAGACCCGCTTCCTGCAGCTGTTTAACCGCCGT
CATTTCCCGTTTGTACTGTTCGTTGCGGCTATCTGGACCTGTCAGGTGATCCCGATGTTCGCTATCTATACCTTTGGGCC
GCAGATCGTCGGGTTACTCGGCTGGGAGCAGGGGCGCAACGCGGCGCTTGGCAATGTGGTGATTAGCCTCTTTTTTATGC
TGGGCTGTATACCGGCGATGTTCTGGCTAAACAGTATTGGCCGTCGCCCTCTGCTTATTGGCAGCTTCGCCATGATGACT
ATCGCGCTGGCGCTGCTGGGGCTGGTGTCAAATCTGGGCATCATACTGGTCGTGGTGGCGTTTGCGGTATACGCCTTCTT
TTCCGGCGGACCGGGCATACTGCAATGGCTTTATCCTAATGAACTCTTCCCGACGGATATTCGCGCTTCGGCCGTGGGGG
TCATCATGTCATTAAGCCGCATCGGAACCATTGTCTCCACCTGGGCATTACCGATTTTTATTACTCGTTACGGTATTAAT
AACGTCATGCTGATTGGCGCGTTGATTTCGTTAGTCGGGCTTGGCGTATCGGTGATGTTTGCCCCGGAAACCCGCGGCTT
GACGCTAACACAGACCGGAAACATGACTTTGCGCGGAACGCCATCGGATAACCCTCGTTAA

Upstream 100 bases:

>100_bases
TCGCCATCCGGCAATCATGTGGCGCCAATGCCGGATGGCGGCGGAAACGCCTTATCCGGCCTACAGATGCGCTTTGCCCG
TGTTGAAACAGGACATCACC

Downstream 100 bases:

>100_bases
GAGTGTTCTGCATTTCTCCCTGCTTTTCGCCAATAACGCTACAGTTAACAGTCACATGCTAAAACAACTGAAAAGCAGGG
AGAACACCATGCAAAAACGT

Product: transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MQQPRNFDDLKFSSIHRRIMLWGSGGPFLDGYVLVIIGVALEQLTPLLHLDAEWIGALGAATLAGLFIGTSLFGYICDKV
GRRKMFLLDIIAIGVISVATMFVSTPLELLVMRVLIGIVIGADYPIATSMITEFSNTRQRAFSIGFIAAMWYVGATCANL
VGYWLYDMEGGWRWMLGSAFIPCLIILIGRFDLPESPRWLLRKGRVKECEQMMIKLFGEPVCFDDELPQETRFLQLFNRR
HFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGWEQGRNAALGNVVISLFFMLGCIPAMFWLNSIGRRPLLIGSFAMMT
IALALLGLVSNLGIILVVVAFAVYAFFSGGPGILQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFITRYGIN
NVMLIGALISLVGLGVSVMFAPETRGLTLTQTGNMTLRGTPSDNPR

Sequences:

>Translated_446_residues
MQQPRNFDDLKFSSIHRRIMLWGSGGPFLDGYVLVIIGVALEQLTPLLHLDAEWIGALGAATLAGLFIGTSLFGYICDKV
GRRKMFLLDIIAIGVISVATMFVSTPLELLVMRVLIGIVIGADYPIATSMITEFSNTRQRAFSIGFIAAMWYVGATCANL
VGYWLYDMEGGWRWMLGSAFIPCLIILIGRFDLPESPRWLLRKGRVKECEQMMIKLFGEPVCFDDELPQETRFLQLFNRR
HFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGWEQGRNAALGNVVISLFFMLGCIPAMFWLNSIGRRPLLIGSFAMMT
IALALLGLVSNLGIILVVVAFAVYAFFSGGPGILQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFITRYGIN
NVMLIGALISLVGLGVSVMFAPETRGLTLTQTGNMTLRGTPSDNPR
>Mature_446_residues
MQQPRNFDDLKFSSIHRRIMLWGSGGPFLDGYVLVIIGVALEQLTPLLHLDAEWIGALGAATLAGLFIGTSLFGYICDKV
GRRKMFLLDIIAIGVISVATMFVSTPLELLVMRVLIGIVIGADYPIATSMITEFSNTRQRAFSIGFIAAMWYVGATCANL
VGYWLYDMEGGWRWMLGSAFIPCLIILIGRFDLPESPRWLLRKGRVKECEQMMIKLFGEPVCFDDELPQETRFLQLFNRR
HFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGWEQGRNAALGNVVISLFFMLGCIPAMFWLNSIGRRPLLIGSFAMMT
IALALLGLVSNLGIILVVVAFAVYAFFSGGPGILQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFITRYGIN
NVMLIGALISLVGLGVSVMFAPETRGLTLTQTGNMTLRGTPSDNPR

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Homo sapiens, GI90669191, Length=339, Percent_Identity=24.7787610619469, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI24497497, Length=339, Percent_Identity=24.7787610619469, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI166064021, Length=400, Percent_Identity=24.75, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI31542327, Length=436, Percent_Identity=24.3119266055046, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI24497490, Length=390, Percent_Identity=25.1282051282051, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI302148518, Length=430, Percent_Identity=23.7209302325581, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI203098995, Length=352, Percent_Identity=25.5681818181818, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI166795299, Length=339, Percent_Identity=25.6637168141593, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI4507005, Length=394, Percent_Identity=24.3654822335025, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI21553331, Length=318, Percent_Identity=22.3270440251572, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI4506999, Length=440, Percent_Identity=23.8636363636364, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI23510410, Length=188, Percent_Identity=26.5957446808511, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI7662270, Length=192, Percent_Identity=23.9583333333333, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI1786229, Length=439, Percent_Identity=86.3325740318907, Blast_Score=764, Evalue=0.0,
Organism=Escherichia coli, GI87082159, Length=439, Percent_Identity=35.0797266514806, Blast_Score=230, Evalue=1e-61,
Organism=Escherichia coli, GI1789312, Length=406, Percent_Identity=24.1379310344828, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1789207, Length=415, Percent_Identity=22.1686746987952, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI1788074, Length=422, Percent_Identity=24.4075829383886, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI1790463, Length=419, Percent_Identity=22.4343675417661, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1788068, Length=472, Percent_Identity=23.3050847457627, Blast_Score=66, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17565978, Length=332, Percent_Identity=25, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17565976, Length=332, Percent_Identity=23.7951807228916, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71991859, Length=424, Percent_Identity=25.7075471698113, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71991854, Length=424, Percent_Identity=25.7075471698113, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI32564663, Length=392, Percent_Identity=22.7040816326531, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71980582, Length=415, Percent_Identity=23.855421686747, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71980584, Length=415, Percent_Identity=23.855421686747, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71986689, Length=163, Percent_Identity=28.8343558282209, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI193202825, Length=163, Percent_Identity=28.8343558282209, Blast_Score=65, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6323512, Length=456, Percent_Identity=23.4649122807018, Blast_Score=97, Evalue=7e-21,
Organism=Drosophila melanogaster, GI28573193, Length=364, Percent_Identity=26.3736263736264, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24644782, Length=364, Percent_Identity=26.3736263736264, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24640198, Length=452, Percent_Identity=22.787610619469, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24640196, Length=452, Percent_Identity=22.787610619469, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24640200, Length=452, Percent_Identity=22.787610619469, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24652795, Length=409, Percent_Identity=24.2053789731051, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24652793, Length=409, Percent_Identity=24.2053789731051, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24668440, Length=400, Percent_Identity=23.75, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI161078612, Length=411, Percent_Identity=22.6277372262774, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24649618, Length=344, Percent_Identity=22.6744186046512, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24653937, Length=452, Percent_Identity=25.2212389380531, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 49296; Mature: 49296

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCEEEEECCCEEEECCCCCCCC
>Mature Secondary Structure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CCCCCCEEEEECCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1630901; 9278503 [H]