Click here to switch to the map view.

The map label for this gene is 16763421

Identifier: 16763421

GI number: 16763421

Start: 34376

End: 34816

Strand: Reverse

Name: 16763421

Synonym: STM0031

Alternate gene names: NA

Gene position: 34816-34376 (Counterclockwise)

Preceding gene: 16763423

Following gene: 16763419

Centisome position: 0.72

GC content: 35.83

Gene sequence:

>441_bases
ATGACTATTTATTTAATTAACAGCACGCACACTTACAATGATAAGACCAATGAGCTAAAAAAGATAAAAACGGGAAAGAT
GATAAAAATTGCCGCAATGCGCATAAAGTGTCTGGAATATATGCTGAATCATGCACAACAAGAGATTATTTATAAAAAAC
AACTCACTAATGAACTTTGGGGGGAAAGAAGTCAATTTATCAGCGACGCCAACCTGACCCAGATATTATATCTACTGCGG
CGCGACCTTAAAGGCTTTGGCCTGAGCCAGTTTTTTTCCACGGTGCCTCGAACGGGTATTAAAGTAGATGCTAACATTAT
TATCAGCAATGAAAACAAAAGCTGCCTCCCCTCTTCTTTAAAAAAAGAAGAGTATAAATATATGGCATTATTTTTCGCTT
TACTGACCATGGTCATAATGGTTATTTATTTAATACGATAA

Upstream 100 bases:

>100_bases
TTCTCTGGAAAAAAGACGCTATTACAATCACACCAGTTGATCCATAAATTTAATATGCATATTATTATCGCCACCCTAAT
TAAACCCATTAAATAACATC

Downstream 100 bases:

>100_bases
TTTGATATTAAACCGACAAATCGCATAAGGATGTGCTTCCTTCAACCAAAGCGTCAGGCTGCTTTTCCTGGCTAAAAAGA
AAGGTCGACTGAAATGTTGA

Product: transcriptional regulator

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MTIYLINSTHTYNDKTNELKKIKTGKMIKIAAMRIKCLEYMLNHAQQEIIYKKQLTNELWGERSQFISDANLTQILYLLR
RDLKGFGLSQFFSTVPRTGIKVDANIIISNENKSCLPSSLKKEEYKYMALFFALLTMVIMVIYLIR

Sequences:

>Translated_146_residues
MTIYLINSTHTYNDKTNELKKIKTGKMIKIAAMRIKCLEYMLNHAQQEIIYKKQLTNELWGERSQFISDANLTQILYLLR
RDLKGFGLSQFFSTVPRTGIKVDANIIISNENKSCLPSSLKKEEYKYMALFFALLTMVIMVIYLIR
>Mature_145_residues
TIYLINSTHTYNDKTNELKKIKTGKMIKIAAMRIKCLEYMLNHAQQEIIYKKQLTNELWGERSQFISDANLTQILYLLRR
DLKGFGLSQFFSTVPRTGIKVDANIIISNENKSCLPSSLKKEEYKYMALFFALLTMVIMVIYLIR

Specific function: Unknown

COG id: COG3710

COG function: function code K; DNA-binding winged-HTH domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17070; Mature: 16938

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIYLINSTHTYNDKTNELKKIKTGKMIKIAAMRIKCLEYMLNHAQQEIIYKKQLTNELW
CEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GERSQFISDANLTQILYLLRRDLKGFGLSQFFSTVPRTGIKVDANIIISNENKSCLPSSL
CCHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEEECCCCCCCCHHH
KKEEYKYMALFFALLTMVIMVIYLIR
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TIYLINSTHTYNDKTNELKKIKTGKMIKIAAMRIKCLEYMLNHAQQEIIYKKQLTNELW
EEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GERSQFISDANLTQILYLLRRDLKGFGLSQFFSTVPRTGIKVDANIIISNENKSCLPSSL
CCHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEEECCCCCCCCHHH
KKEEYKYMALFFALLTMVIMVIYLIR
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA