| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is fxsA [H]
Identifier: 161353575
GI number: 161353575
Start: 4572722
End: 4573198
Strand: Direct
Name: fxsA [H]
Synonym: STM4327
Alternate gene names: 161353575
Gene position: 4572722-4573198 (Clockwise)
Preceding gene: 16767570
Following gene: 16767578
Centisome position: 94.14
GC content: 48.64
Gene sequence:
>477_bases TTGCGCTGGATACCCTTTTTAGCTGTCTTTCTCTATGTTTACATTGAGATTTCTATCTTTATCCAGGTCGCCCATGTGCT TGGTGTCCTGATGACGCTAATCCTGGTGATTTTTACGTCTGTTATCGGTATGTCGCTGGTACGTAACCAGGGTTTTAAAA ACTTTTTGCTGATGCAACAAAAAATGGCGGCCGGTGAGAGCCCGGCGGCAGAAATGATTAAGAGTGTATCGCTGATCATC GCTGGCTTACTGCTCCTGTTGCCGGGGTTTTTCACCGATTTTCTCGGCCTTCTCCTTTTGTTACCGCCGGTGCAAAAACA TTTGACGCTGAAGTTGCTGCCGCATTTACGTTTTTCCCGGATGCCGGGCGGCGGGTTTAGCGCGGGTACTGGCGGTGGCG AAACATTTGACGGCGAGTATCAGCGTAAAGATGACGATCGCGATCGTATTGAACATAAAGACGATCGTCGGGATTAA
Upstream 100 bases:
>100_bases CCACTTGAAATTTTGCTACGCACCACCATATCGAATCGATGCGAATCGCAACCCCATTCAAATGGTCGTCGCAGACGGCC ATGACTTACAGGAGAGTCCT
Downstream 100 bases:
>100_bases AGGTAGAGATGCTGGCCGGATAAGTCGCGTGAGGCGTTATCCGGCCAACAGATACGTCTTACGCCATGCGTTTTCGCTTC GGTAAAAACAGCCATAATGC
Product: FxsA
Products: NA
Alternate protein names: Suppressor of F exclusion of phage T7 [H]
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MRWIPFLAVFLYVYIEISIFIQVAHVLGVLMTLILVIFTSVIGMSLVRNQGFKNFLLMQQKMAAGESPAAEMIKSVSLII AGLLLLLPGFFTDFLGLLLLLPPVQKHLTLKLLPHLRFSRMPGGGFSAGTGGGETFDGEYQRKDDDRDRIEHKDDRRD
Sequences:
>Translated_158_residues MRWIPFLAVFLYVYIEISIFIQVAHVLGVLMTLILVIFTSVIGMSLVRNQGFKNFLLMQQKMAAGESPAAEMIKSVSLII AGLLLLLPGFFTDFLGLLLLLPPVQKHLTLKLLPHLRFSRMPGGGFSAGTGGGETFDGEYQRKDDDRDRIEHKDDRRD >Mature_158_residues MRWIPFLAVFLYVYIEISIFIQVAHVLGVLMTLILVIFTSVIGMSLVRNQGFKNFLLMQQKMAAGESPAAEMIKSVSLII AGLLLLLPGFFTDFLGLLLLLPPVQKHLTLKLLPHLRFSRMPGGGFSAGTGGGETFDGEYQRKDDDRDRIEHKDDRRD
Specific function: Overexpression alleviates the exclusion of phage T7 in cells harboring the F plasmid [H]
COG id: COG3030
COG function: function code R; Protein affecting phage T7 exclusion by the F plasmid
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0716 (fxsA) family [H]
Homologues:
Organism=Escherichia coli, GI87082376, Length=158, Percent_Identity=91.1392405063291, Blast_Score=233, Evalue=5e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007313 [H]
Pfam domain/function: PF04186 FxsA [H]
EC number: NA
Molecular weight: Translated: 17736; Mature: 17736
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWIPFLAVFLYVYIEISIFIQVAHVLGVLMTLILVIFTSVIGMSLVRNQGFKNFLLMQQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH KMAAGESPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLPPVQKHLTLKLLPHLRFSR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC MPGGGFSAGTGGGETFDGEYQRKDDDRDRIEHKDDRRD CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC >Mature Secondary Structure MRWIPFLAVFLYVYIEISIFIQVAHVLGVLMTLILVIFTSVIGMSLVRNQGFKNFLLMQQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH KMAAGESPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLPPVQKHLTLKLLPHLRFSR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC MPGGGFSAGTGGGETFDGEYQRKDDDRDRIEHKDDRRD CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10497016; 7610040; 9278503; 3541901; 7984428; 10497017 [H]