| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is yeeN [C]
Identifier: 161353571
GI number: 161353571
Start: 4752665
End: 4753381
Strand: Reverse
Name: yeeN [C]
Synonym: STM4499
Alternate gene names: 161353571
Gene position: 4753381-4752665 (Counterclockwise)
Preceding gene: 16767744
Following gene: 16767742
Centisome position: 97.86
GC content: 38.91
Gene sequence:
>717_bases GTGGGACGTAAATGGGCAAATATTGTTGCTAAGAAAACAGCTAAAGACGGTGCAACGTCTAAAGTATATGCAAAATTTGG TGTAGAAATCTATGCTGCTGCTAAACAAGGTGAACCAGACCCGGAATCAAACTCAGCTTTAAAATTCGTTATTGAACGTG CGAAACAAGCACAGGTTCCAAAACATGTTATTGATAAAGCTATTGATAAAGCCAAAGGTGGCGGAGATGAAACGTTCGTG CAAGGGCGTTATGAAGGCTTTGGACCCAATGGTTCAATGGTTATCGCTGAAACGTTGACGTCTAATGTTAACCGTACGAT TGCTAATATCCGCACAATTTTTAATAAAAAAGGCGGGAATATCGGAGCGGCAGGTGCTGTCAGCTATATGTTTGACAATA CTGGAGTGATTGTATTTAAAGGAACAGACCCTGACCATATTTTTGAAATTTTGCTTGATGCTGAAGTTGATGTTCGTGAT GTAACCGAAGAAGAAGGAAACATCGTTATTTATACTGAAGCTACAGACCTGCATAAAGGAATCGCAGCGCTAAAAGCAGC TGGAATTTCTGAATTTTCAACAACAGAATTAGAAATGATTGCTCAATCAGAAGTTGAACTTTCACCAGAAGATTTAGAAA TCTTTGAAGGACTTGTTGATGCCCTTGAAGATGATGATGATGTGCAAAAAGTATATCATAACGTTGCAAACCTCTAA
Upstream 100 bases:
>100_bases CATAGACGAGAATTTATATATTATGATATAATACGGCAGAAAAACATGCAGGTTATTAACCTGCCATTAATGTAAATAAT TTTTTGAGGAGATGTTTCCA
Downstream 100 bases:
>100_bases TTATAAATTAAACAAATCTGTCTCTATGGCAGATTTGTTTAATTTATAAAGCTGTTATAAAAAAGTCTATCTGGCCAGAT ATATAGATCTTTAAATTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MGRKWANIVAKKTAKDGATSKVYAKFGVEIYAAAKQGEPDPESNSALKFVIERAKQAQVPKHVIDKAIDKAKGGGDETFV QGRYEGFGPNGSMVIAETLTSNVNRTIANIRTIFNKKGGNIGAAGAVSYMFDNTGVIVFKGTDPDHIFEILLDAEVDVRD VTEEEGNIVIYTEATDLHKGIAALKAAGISEFSTTELEMIAQSEVELSPEDLEIFEGLVDALEDDDDVQKVYHNVANL
Sequences:
>Translated_238_residues MGRKWANIVAKKTAKDGATSKVYAKFGVEIYAAAKQGEPDPESNSALKFVIERAKQAQVPKHVIDKAIDKAKGGGDETFV QGRYEGFGPNGSMVIAETLTSNVNRTIANIRTIFNKKGGNIGAAGAVSYMFDNTGVIVFKGTDPDHIFEILLDAEVDVRD VTEEEGNIVIYTEATDLHKGIAALKAAGISEFSTTELEMIAQSEVELSPEDLEIFEGLVDALEDDDDVQKVYHNVANL >Mature_237_residues GRKWANIVAKKTAKDGATSKVYAKFGVEIYAAAKQGEPDPESNSALKFVIERAKQAQVPKHVIDKAIDKAKGGGDETFVQ GRYEGFGPNGSMVIAETLTSNVNRTIANIRTIFNKKGGNIGAAGAVSYMFDNTGVIVFKGTDPDHIFEILLDAEVDVRDV TEEEGNIVIYTEATDLHKGIAALKAAGISEFSTTELEMIAQSEVELSPEDLEIFEGLVDALEDDDDVQKVYHNVANL
Specific function: Unknown
COG id: COG0217
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TACO1 family [H]
Homologues:
Organism=Homo sapiens, GI27545315, Length=242, Percent_Identity=33.8842975206612, Blast_Score=119, Evalue=2e-27, Organism=Escherichia coli, GI1788294, Length=238, Percent_Identity=95.7983193277311, Blast_Score=468, Evalue=1e-133, Organism=Escherichia coli, GI1788171, Length=236, Percent_Identity=38.5593220338983, Blast_Score=157, Evalue=8e-40, Organism=Saccharomyces cerevisiae, GI6321458, Length=268, Percent_Identity=32.8358208955224, Blast_Score=88, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002876 - InterPro: IPR017856 [H]
Pfam domain/function: PF01709 DUF28 [H]
EC number: NA
Molecular weight: Translated: 25727; Mature: 25596
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRKWANIVAKKTAKDGATSKVYAKFGVEIYAAAKQGEPDPESNSALKFVIERAKQAQVP CCCHHHHHHHHHHCCCCCCHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCC KHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMVIAETLTSNVNRTIANIRTIFNKKGGN HHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCC IGAAGAVSYMFDNTGVIVFKGTDPDHIFEILLDAEVDVRDVTEEEGNIVIYTEATDLHKG CCCHHHEEEEECCCCEEEEECCCHHHHHHHHHCCCCCHHHCCCCCCCEEEEECCHHHHHH IAALKAAGISEFSTTELEMIAQSEVELSPEDLEIFEGLVDALEDDDDVQKVYHNVANL HHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure GRKWANIVAKKTAKDGATSKVYAKFGVEIYAAAKQGEPDPESNSALKFVIERAKQAQVP CCHHHHHHHHHHCCCCCCHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCC KHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMVIAETLTSNVNRTIANIRTIFNKKGGN HHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCC IGAAGAVSYMFDNTGVIVFKGTDPDHIFEILLDAEVDVRDVTEEEGNIVIYTEATDLHKG CCCHHHEEEEECCCCEEEEECCCHHHHHHHHHCCCCCHHHCCCCCCCEEEEECCHHHHHH IAALKAAGISEFSTTELEMIAQSEVELSPEDLEIFEGLVDALEDDDDVQKVYHNVANL HHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA