| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is glnP [H]
Identifier: 218931085
GI number: 218931085
Start: 4630213
End: 4630968
Strand: Reverse
Name: glnP [H]
Synonym: YPO4109
Alternate gene names: 218931085
Gene position: 4630968-4630213 (Counterclockwise)
Preceding gene: 218931086
Following gene: 218931083
Centisome position: 99.51
GC content: 49.6
Gene sequence:
>756_bases ATGGATTTTACCATTATCGTTGATAACTGGCGTTATCTGCTGTGGGGGACTTTCCCTGATGGCCCTCTGGGAGGGGCGGC ATTGACCGTGGTGATCAGTATCATGGCTGGGGTAGCCTCAGCCGTATTAGGCACTGTGTTGGGCGTGGCATTGGCGATGT CCCGTGGTGTCTGGGCGGGAATATTGGCCGCTGTTTTGGGCTTCTTCCGTGCGATTCCGGTGATTATGTTGATTTTTTGG ACGTATTTCCTGCTACCGATCGTTTTTGGTGTGGATATACCTGAAATCACCACTGTGGTGTGTGCACTGGCGCTGATTGC TTCTGCTTATCTGGCTCATGCGGTAAAGGCCGGGATAATGGCTATTGGTGCCGGGCAGTGGCAAGCGGGGCTGTCGTTAG GTTTTAATCGCTGGCAGACCCTGTGGTTTATTGTATTGCCACAAGCGCTGCGCATGATGGTGCCGTCCTTTATTAATCAA TGGATATCATTGATTAAAGATACATCGCTGGCTTATATCGTCGGAGTGAATGAGCTGACCTTTTTGGCTACACAGGTTAA TAACCGCAGTATGGTTTACCCGATGGAAGTCTTTCTGTTTGTGGCATTGGTCTATTTTGTTTTATGTCTGGCGCTGGATC TACTGGCTAACGGCCTTAATCGCCGCTTTAGCCCACAGCATGCCATTAAAAACCAAAGCTCCATGGCACGTTCATGGCGC TGGTGGTGTAACAAGCTAACACTGCAATCGAGTTAA
Upstream 100 bases:
>100_bases GCATTCGGGGTTGCAACCCTATTGTATATTTTCATCATCGCGCTAATTGAGGCTTGGGGTATGTGGCGTCAACAGCGAAC CGTCGTCCGAGGGCACTGAG
Downstream 100 bases:
>100_bases TTGATTATAGGCAGGCTAATTCATTACAGGTAAATTAATCGCGGGTGATATGCCAGCCTCTTTCCTTCCACAAATGAGGC AGTTGCTGAATATCCGTGAA
Product: putative amino acid transport system permease
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MDFTIIVDNWRYLLWGTFPDGPLGGAALTVVISIMAGVASAVLGTVLGVALAMSRGVWAGILAAVLGFFRAIPVIMLIFW TYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIMAIGAGQWQAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQ WISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRRFSPQHAIKNQSSMARSWR WWCNKLTLQSS
Sequences:
>Translated_251_residues MDFTIIVDNWRYLLWGTFPDGPLGGAALTVVISIMAGVASAVLGTVLGVALAMSRGVWAGILAAVLGFFRAIPVIMLIFW TYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIMAIGAGQWQAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQ WISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRRFSPQHAIKNQSSMARSWR WWCNKLTLQSS >Mature_251_residues MDFTIIVDNWRYLLWGTFPDGPLGGAALTVVISIMAGVASAVLGTVLGVALAMSRGVWAGILAAVLGFFRAIPVIMLIFW TYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIMAIGAGQWQAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQ WISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRRFSPQHAIKNQSSMARSWR WWCNKLTLQSS
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=214, Percent_Identity=35.5140186915888, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1787030, Length=204, Percent_Identity=31.8627450980392, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1788226, Length=210, Percent_Identity=33.8095238095238, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI87082239, Length=209, Percent_Identity=31.1004784688995, Blast_Score=100, Evalue=8e-23, Organism=Escherichia coli, GI1787087, Length=225, Percent_Identity=25.7777777777778, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI48994930, Length=136, Percent_Identity=33.8235294117647, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1788646, Length=227, Percent_Identity=25.5506607929515, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1786874, Length=232, Percent_Identity=23.2758620689655, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1788645, Length=228, Percent_Identity=26.3157894736842, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27666; Mature: 27666
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFTIIVDNWRYLLWGTFPDGPLGGAALTVVISIMAGVASAVLGTVLGVALAMSRGVWAG CCEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ILAAVLGFFRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGAGQWQAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELT HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHH FLATQVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRRFSPQHAIKNQSSMARSWR HHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHH WWCNKLTLQSS HHHHHHCCCCC >Mature Secondary Structure MDFTIIVDNWRYLLWGTFPDGPLGGAALTVVISIMAGVASAVLGTVLGVALAMSRGVWAG CCEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ILAAVLGFFRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGAGQWQAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELT HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHH FLATQVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRRFSPQHAIKNQSSMARSWR HHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHH WWCNKLTLQSS HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]