Click here to switch to the map view.

The map label for this gene is yidE [C]

Identifier: 218931062

GI number: 218931062

Start: 4603900

End: 4605558

Strand: Reverse

Name: yidE [C]

Synonym: YPO4083

Alternate gene names: 218931062

Gene position: 4605558-4603900 (Counterclockwise)

Preceding gene: 218931063

Following gene: 218931057

Centisome position: 98.96

GC content: 51.18

Gene sequence:

>1659_bases
ATGAGTGCTATCGCCCTTACCGTCAGTATGTTGGCGCTGGTCGCCGTATTGGGGTTATGGATCGGTAATTGGAAAATCTA
TGGTGTGGGGTTAGGTATCGGTGGGGTGCTATTTGGCGGCATTATTGTGGGCCATTTTGCACAAACTTATCAGATCGTTC
TTAACGGAGATATGCTGCATTTTATTCAAGAGTTCGGCCTGATTCTGTTTGTGTATACCATCGGTATTCAAGTTGGGCCG
GGGTTCTTCTCTTCACTACGGGTATCGGGGTTGCGGCTTAACTGCTTCGCCATCTTGATGGTGGTTGTGGGCGGGTTAGT
AACAGCGATTATTCATAAGCTGTTTGCTGTGCCGCTGCCGATTATTCTGGGGGTGTTTTCTGGTGCGGTAACCAATACAC
CGGCACTTGGTGCGGCTCAGCAAATTCTTACCGATTTAGGTTCGCCGCCACAACTGGTCAGTCAAATGGGGATGGGTTAC
GCCATGGCGTATCCATTTGGTATTTGTGGCATTTTACTGGTGATGTGGCTGATTCGTTTATTCTTTAAAATCAATATCGA
TCGTGAAGCGAAAGCGTTCGACAGCAGCTACGGGCAAAACCGCGAGTTGCTGCAAACCATGAACGTTGCGGTGCGTAACC
CCAATCTACATGGTTTATCGGTACAGGATGTGCCATTGCTGAACAGCGATGAGGTGGTCTGTTCACGATTGAAGCGTGGC
GATTTACTGATGGTGCCCATGCCAGCCACGGTGATTGAAATTGGGGATTATCTGCATTTGGTCGGGCAACGGGATGCGCT
GGAGAAAGTGCGGCTGGTTGTGGGTGAAGAGGTCGATGTGACATTATCCACGGCAGGAACGGCGTTGCAAACGGCTCGAG
TGGTAGTGACCAACGAGGCGGTACTGGGTAAAAAAATCCGCGATCTTAATCTAAAACAGAAGTATGACGTGGTGATTACT
CGTCTTAATCGCGCGGGTATCGAGCTGGTCGCCAGCAACAGTGCCAGCTTGCAATTCGGCGATATCCTGAATTTAGTGGG
CCGTCCTGAAGCTATCGAAGCGGTGTCCGCGATTGTGGGGAACGCGCAGCAAAAATTGCAACAGGTGCAGATGTTACCGG
TATTTATCGGTGTCGGTCTCGGGGTTTTACTGGGGTCGATACCGCTGTTTGTTCCAGGGTTTCCGGCGGCATTACGTTTA
GGGCTAGCGGGTGGTCCGCTAGTGGTGGCGTTGATCCTCGGACGGATTGGTAGCATTGGTAAGCTGTATTGGTTTATGCC
ACCGAGTGCTAACCTGGCCTTGCGTGAATTGGGGATAGTGCTGTTTTTGTCAGTGGTCGGATTGAAATCCGGCGGTGATT
TTATCAATACGCTGGTCAATGGTGATGGGCTGGCATGGATTGGTTATGGTGCGATGATCACCGGGATACCGTTGCTAACG
GTAGGCATTTTGGCACGTATGCTGGTCAAAATGAACTACCTGACGCTATGTGGCATGTTAGCGGGTTCGATGACGGATCC
ACCTGCGCTGGCCTTTGCCAATGGCCTGCACCCGACCAGCGGTGCGGCGGCGTTGTCTTATGCGACAGTGTACCCGCTGG
CGATGTTTCTACGAATCATGTCACCACAGATATTGGCGGTATTGTTCTGGACGTTGTAG

Upstream 100 bases:

>100_bases
GCCGTGCATCTGAGGCAATCATGATGCTGGTGAGAATAGAGAATCCCTGTGGGAATGGAAGCGGCCAACCTATTTTTAAA
CTTAGGCAAGGAAGTGATTT

Downstream 100 bases:

>100_bases
AGCGTTAATTCGCGGGCTATTAAACTTCAGGGCAGCGTAATTGGCTGCCCTGTTTGTATTGGTGAAGGGGGTAACGGCGA
TTCACTCTGTTGGCGAGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 552; Mature: 551

Protein sequence:

>552_residues
MSAIALTVSMLALVAVLGLWIGNWKIYGVGLGIGGVLFGGIIVGHFAQTYQIVLNGDMLHFIQEFGLILFVYTIGIQVGP
GFFSSLRVSGLRLNCFAILMVVVGGLVTAIIHKLFAVPLPIILGVFSGAVTNTPALGAAQQILTDLGSPPQLVSQMGMGY
AMAYPFGICGILLVMWLIRLFFKINIDREAKAFDSSYGQNRELLQTMNVAVRNPNLHGLSVQDVPLLNSDEVVCSRLKRG
DLLMVPMPATVIEIGDYLHLVGQRDALEKVRLVVGEEVDVTLSTAGTALQTARVVVTNEAVLGKKIRDLNLKQKYDVVIT
RLNRAGIELVASNSASLQFGDILNLVGRPEAIEAVSAIVGNAQQKLQQVQMLPVFIGVGLGVLLGSIPLFVPGFPAALRL
GLAGGPLVVALILGRIGSIGKLYWFMPPSANLALRELGIVLFLSVVGLKSGGDFINTLVNGDGLAWIGYGAMITGIPLLT
VGILARMLVKMNYLTLCGMLAGSMTDPPALAFANGLHPTSGAAALSYATVYPLAMFLRIMSPQILAVLFWTL

Sequences:

>Translated_552_residues
MSAIALTVSMLALVAVLGLWIGNWKIYGVGLGIGGVLFGGIIVGHFAQTYQIVLNGDMLHFIQEFGLILFVYTIGIQVGP
GFFSSLRVSGLRLNCFAILMVVVGGLVTAIIHKLFAVPLPIILGVFSGAVTNTPALGAAQQILTDLGSPPQLVSQMGMGY
AMAYPFGICGILLVMWLIRLFFKINIDREAKAFDSSYGQNRELLQTMNVAVRNPNLHGLSVQDVPLLNSDEVVCSRLKRG
DLLMVPMPATVIEIGDYLHLVGQRDALEKVRLVVGEEVDVTLSTAGTALQTARVVVTNEAVLGKKIRDLNLKQKYDVVIT
RLNRAGIELVASNSASLQFGDILNLVGRPEAIEAVSAIVGNAQQKLQQVQMLPVFIGVGLGVLLGSIPLFVPGFPAALRL
GLAGGPLVVALILGRIGSIGKLYWFMPPSANLALRELGIVLFLSVVGLKSGGDFINTLVNGDGLAWIGYGAMITGIPLLT
VGILARMLVKMNYLTLCGMLAGSMTDPPALAFANGLHPTSGAAALSYATVYPLAMFLRIMSPQILAVLFWTL
>Mature_551_residues
SAIALTVSMLALVAVLGLWIGNWKIYGVGLGIGGVLFGGIIVGHFAQTYQIVLNGDMLHFIQEFGLILFVYTIGIQVGPG
FFSSLRVSGLRLNCFAILMVVVGGLVTAIIHKLFAVPLPIILGVFSGAVTNTPALGAAQQILTDLGSPPQLVSQMGMGYA
MAYPFGICGILLVMWLIRLFFKINIDREAKAFDSSYGQNRELLQTMNVAVRNPNLHGLSVQDVPLLNSDEVVCSRLKRGD
LLMVPMPATVIEIGDYLHLVGQRDALEKVRLVVGEEVDVTLSTAGTALQTARVVVTNEAVLGKKIRDLNLKQKYDVVITR
LNRAGIELVASNSASLQFGDILNLVGRPEAIEAVSAIVGNAQQKLQQVQMLPVFIGVGLGVLLGSIPLFVPGFPAALRLG
LAGGPLVVALILGRIGSIGKLYWFMPPSANLALRELGIVLFLSVVGLKSGGDFINTLVNGDGLAWIGYGAMITGIPLLTV
GILARMLVKMNYLTLCGMLAGSMTDPPALAFANGLHPTSGAAALSYATVYPLAMFLRIMSPQILAVLFWTL

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI87082315, Length=552, Percent_Identity=75, Blast_Score=837, Evalue=0.0,
Organism=Escherichia coli, GI1787071, Length=564, Percent_Identity=24.645390070922, Blast_Score=125, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006037
- InterPro:   IPR023018
- InterPro:   IPR006512 [H]

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 58703; Mature: 58572

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIALTVSMLALVAVLGLWIGNWKIYGVGLGIGGVLFGGIIVGHFAQTYQIVLNGDMLH
CCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHEEEEECCHHHH
FIQEFGLILFVYTIGIQVGPGFFSSLRVSGLRLNCFAILMVVVGGLVTAIIHKLFAVPLP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IILGVFSGAVTNTPALGAAQQILTDLGSPPQLVSQMGMGYAMAYPFGICGILLVMWLIRL
HHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHH
FFKINIDREAKAFDSSYGQNRELLQTMNVAVRNPNLHGLSVQDVPLLNSDEVVCSRLKRG
HHHCCCCCHHHHHHHCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHCCC
DLLMVPMPATVIEIGDYLHLVGQRDALEKVRLVVGEEVDVTLSTAGTALQTARVVVTNEA
CEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCHHHHEEEEEECCH
VLGKKIRDLNLKQKYDVVITRLNRAGIELVASNSASLQFGDILNLVGRPEAIEAVSAIVG
HHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHCCCHHHHHHHHHHH
NAQQKLQQVQMLPVFIGVGLGVLLGSIPLFVPGFPAALRLGLAGGPLVVALILGRIGSIG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCCC
KLYWFMPPSANLALRELGIVLFLSVVGLKSGGDFINTLVNGDGLAWIGYGAMITGIPLLT
EEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHH
VGILARMLVKMNYLTLCGMLAGSMTDPPALAFANGLHPTSGAAALSYATVYPLAMFLRIM
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
SPQILAVLFWTL
CHHHHHHHHHCC
>Mature Secondary Structure 
SAIALTVSMLALVAVLGLWIGNWKIYGVGLGIGGVLFGGIIVGHFAQTYQIVLNGDMLH
CHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHEEEEECCHHHH
FIQEFGLILFVYTIGIQVGPGFFSSLRVSGLRLNCFAILMVVVGGLVTAIIHKLFAVPLP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IILGVFSGAVTNTPALGAAQQILTDLGSPPQLVSQMGMGYAMAYPFGICGILLVMWLIRL
HHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHH
FFKINIDREAKAFDSSYGQNRELLQTMNVAVRNPNLHGLSVQDVPLLNSDEVVCSRLKRG
HHHCCCCCHHHHHHHCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHCCC
DLLMVPMPATVIEIGDYLHLVGQRDALEKVRLVVGEEVDVTLSTAGTALQTARVVVTNEA
CEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCHHHHEEEEEECCH
VLGKKIRDLNLKQKYDVVITRLNRAGIELVASNSASLQFGDILNLVGRPEAIEAVSAIVG
HHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHCCCHHHHHHHHHHH
NAQQKLQQVQMLPVFIGVGLGVLLGSIPLFVPGFPAALRLGLAGGPLVVALILGRIGSIG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCCC
KLYWFMPPSANLALRELGIVLFLSVVGLKSGGDFINTLVNGDGLAWIGYGAMITGIPLLT
EEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHH
VGILARMLVKMNYLTLCGMLAGSMTDPPALAFANGLHPTSGAAALSYATVYPLAMFLRIM
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
SPQILAVLFWTL
CHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA