| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is phnK [H]
Identifier: 218930475
GI number: 218930475
Start: 3867903
End: 3868694
Strand: Direct
Name: phnK [H]
Synonym: YPO3461
Alternate gene names: 218930475
Gene position: 3867903-3868694 (Clockwise)
Preceding gene: 218930474
Following gene: 218930476
Centisome position: 83.11
GC content: 55.05
Gene sequence:
>792_bases ATGATGTCAGCCCAATCTACCCCTCAGCCGCTGTTGTCGGTGGAGAATCTCACTCATTTATATGCGCCGGGCAAAGGATT CAGTGATGTCTCTTTTCAGCTCTATCCCGGTGAGGTTTTGGGGATCGTCGGCGAATCCGGCTCGGGTAAAACCACCTTGC TGAAAGCTATTTCGGCCCGTTTAGCCCCACAGCAGGGGCAGATCATTTACCGCACGGGTACACAGCAACCGGTTGATTTA TACGAAATGGCCGAAAGTCAGCGCCGCCGTTTGTTGCGTACCGAATGGGGTGTGGTACATCAGCACCCACTGGACGGCTT GCGCCCACAAGTCTCCGCGGGCGGCAACATCGGCGAACGTTTAATGGCTACCGGCCAGCGCCATTACGGCGAGATCCGCC AACTTGCAGGCCGCTGGCTGGAAGATGTCGAGATCCCGTTATCCCGATTGGATGACCTCCCCACCACTTTCTCCGGCGGG ATGCAGCAGCGCCTGCAAATCGCCCGTAATTTGGTGACCCATCCGAAACTGGTTTTTATGGATGAACCTACGGGCGGCTT GGATGTATCAGTGCAGGCACGTTTACTGGATTTACTGCGCAATTTGGTGGTGGAAATGCAGCTAGCCGTGGTGATTGTCA CTCATGACTTGGGGGTAGCCCGCTTATTAGCTAACCGTCTATTGGTGATGAAAGAGGGCCAGGTTATCGAAAGCGGCCTT ACCGACCGGGTACTGGACGATCCCCATCACCCCTACACCCAACTCCTGGTCTCATCGGTACTGCAAAACTAA
Upstream 100 bases:
>100_bases GTAGCCGCATGTTTGTTTGCTCGGATACTGATTTTTGCCAGCAGCAACTGGCTCAAGCCAGCGCACAAGAAGCCACATCC CCAACCGAGGTACCTGTCTG
Downstream 100 bases:
>100_bases ACCACTGCTGGCTCTATTTTTGCTCTTTGATTTTGCATTTGCAGTTGGTTTTTGATTTTGACTTTTAGGCCGTTGACCTT GAACGGCGAATCGGCCAACG
Product: phosphonate C-P lyase system protein PhnK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MMSAQSTPQPLLSVENLTHLYAPGKGFSDVSFQLYPGEVLGIVGESGSGKTTLLKAISARLAPQQGQIIYRTGTQQPVDL YEMAESQRRRLLRTEWGVVHQHPLDGLRPQVSAGGNIGERLMATGQRHYGEIRQLAGRWLEDVEIPLSRLDDLPTTFSGG MQQRLQIARNLVTHPKLVFMDEPTGGLDVSVQARLLDLLRNLVVEMQLAVVIVTHDLGVARLLANRLLVMKEGQVIESGL TDRVLDDPHHPYTQLLVSSVLQN
Sequences:
>Translated_263_residues MMSAQSTPQPLLSVENLTHLYAPGKGFSDVSFQLYPGEVLGIVGESGSGKTTLLKAISARLAPQQGQIIYRTGTQQPVDL YEMAESQRRRLLRTEWGVVHQHPLDGLRPQVSAGGNIGERLMATGQRHYGEIRQLAGRWLEDVEIPLSRLDDLPTTFSGG MQQRLQIARNLVTHPKLVFMDEPTGGLDVSVQARLLDLLRNLVVEMQLAVVIVTHDLGVARLLANRLLVMKEGQVIESGL TDRVLDDPHHPYTQLLVSSVLQN >Mature_263_residues MMSAQSTPQPLLSVENLTHLYAPGKGFSDVSFQLYPGEVLGIVGESGSGKTTLLKAISARLAPQQGQIIYRTGTQQPVDL YEMAESQRRRLLRTEWGVVHQHPLDGLRPQVSAGGNIGERLMATGQRHYGEIRQLAGRWLEDVEIPLSRLDDLPTTFSGG MQQRLQIARNLVTHPKLVFMDEPTGGLDVSVQARLLDLLRNLVVEMQLAVVIVTHDLGVARLLANRLLVMKEGQVIESGL TDRVLDDPHHPYTQLLVSSVLQN
Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates. Probably responsible for energy coupling to the transport system [H]
COG id: COG4107
COG function: function code P; ABC-type phosphonate transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI45446740, Length=242, Percent_Identity=28.099173553719, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI47078218, Length=242, Percent_Identity=28.099173553719, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI21536376, Length=231, Percent_Identity=25.974025974026, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI42490749, Length=268, Percent_Identity=27.9850746268657, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI105990541, Length=236, Percent_Identity=29.2372881355932, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI116734710, Length=217, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI171184400, Length=248, Percent_Identity=26.2096774193548, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI31657092, Length=232, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI48994997, Length=255, Percent_Identity=85.4901960784314, Blast_Score=436, Evalue=1e-124, Organism=Escherichia coli, GI145693107, Length=266, Percent_Identity=34.9624060150376, Blast_Score=150, Evalue=9e-38, Organism=Escherichia coli, GI1789963, Length=256, Percent_Identity=36.71875, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI1789962, Length=262, Percent_Identity=34.7328244274809, Blast_Score=145, Evalue=3e-36, Organism=Escherichia coli, GI1787500, Length=237, Percent_Identity=35.8649789029536, Blast_Score=143, Evalue=1e-35, Organism=Escherichia coli, GI1787758, Length=235, Percent_Identity=37.4468085106383, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI48994883, Length=263, Percent_Identity=34.9809885931559, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI1788506, Length=273, Percent_Identity=35.1648351648352, Blast_Score=129, Evalue=1e-31, Organism=Escherichia coli, GI1787759, Length=257, Percent_Identity=35.0194552529183, Blast_Score=128, Evalue=5e-31, Organism=Escherichia coli, GI1789672, Length=253, Percent_Identity=30.4347826086957, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI1787548, Length=262, Percent_Identity=28.2442748091603, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1788225, Length=252, Percent_Identity=31.7460317460317, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1786872, Length=254, Percent_Identity=30.7086614173228, Blast_Score=107, Evalue=6e-25, Organism=Escherichia coli, GI1789891, Length=238, Percent_Identity=30.672268907563, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1787029, Length=239, Percent_Identity=30.5439330543933, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI87081834, Length=229, Percent_Identity=34.061135371179, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1786398, Length=262, Percent_Identity=26.3358778625954, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1789032, Length=249, Percent_Identity=27.710843373494, Blast_Score=100, Evalue=7e-23, Organism=Escherichia coli, GI87081791, Length=261, Percent_Identity=28.3524904214559, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI1787089, Length=229, Percent_Identity=29.2576419213974, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1787792, Length=243, Percent_Identity=29.6296296296296, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1788761, Length=241, Percent_Identity=30.2904564315353, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787547, Length=260, Percent_Identity=26.9230769230769, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1788644, Length=255, Percent_Identity=30.1960784313725, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1789864, Length=246, Percent_Identity=26.8292682926829, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1789890, Length=234, Percent_Identity=29.9145299145299, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1790525, Length=254, Percent_Identity=26.3779527559055, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1786703, Length=211, Percent_Identity=34.5971563981043, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1790190, Length=232, Percent_Identity=28.448275862069, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1789991, Length=242, Percent_Identity=28.5123966942149, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI87081709, Length=234, Percent_Identity=26.4957264957265, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI1790534, Length=199, Percent_Identity=33.1658291457286, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1790162, Length=266, Percent_Identity=27.0676691729323, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1790739, Length=242, Percent_Identity=30.1652892561983, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1787712, Length=252, Percent_Identity=26.1904761904762, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1787164, Length=231, Percent_Identity=29.8701298701299, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787105, Length=242, Percent_Identity=31.8181818181818, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1789873, Length=229, Percent_Identity=28.3842794759825, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI48995001, Length=239, Percent_Identity=27.6150627615063, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1786563, Length=220, Percent_Identity=30.9090909090909, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787370, Length=262, Percent_Identity=23.6641221374046, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788897, Length=232, Percent_Identity=26.2931034482759, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1788210, Length=241, Percent_Identity=27.3858921161826, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1788450, Length=258, Percent_Identity=25.5813953488372, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1789751, Length=231, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1790467, Length=252, Percent_Identity=25.3968253968254, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786803, Length=235, Percent_Identity=27.6595744680851, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786345, Length=223, Percent_Identity=28.6995515695067, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1786253, Length=216, Percent_Identity=27.7777777777778, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI87082268, Length=238, Percent_Identity=26.890756302521, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI48994943, Length=230, Percent_Identity=24.3478260869565, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI87081782, Length=255, Percent_Identity=26.2745098039216, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1789593, Length=241, Percent_Identity=26.1410788381743, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1786319, Length=233, Percent_Identity=24.8927038626609, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1788053, Length=213, Percent_Identity=28.169014084507, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1786981, Length=206, Percent_Identity=32.0388349514563, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI87082267, Length=240, Percent_Identity=27.0833333333333, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788472, Length=256, Percent_Identity=23.828125, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI115533608, Length=242, Percent_Identity=26.0330578512397, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI193202349, Length=224, Percent_Identity=27.6785714285714, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71984940, Length=220, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI115534520, Length=241, Percent_Identity=25.3112033195021, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17543740, Length=240, Percent_Identity=25.4166666666667, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI25146777, Length=247, Percent_Identity=27.9352226720648, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17558664, Length=215, Percent_Identity=26.5116279069767, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17510237, Length=256, Percent_Identity=20.703125, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6322640, Length=250, Percent_Identity=29.6, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI24641565, Length=225, Percent_Identity=27.5555555555556, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI23397593, Length=248, Percent_Identity=27.4193548387097, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI116007184, Length=245, Percent_Identity=27.3469387755102, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI221500365, Length=245, Percent_Identity=27.3469387755102, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24643674, Length=207, Percent_Identity=25.6038647342995, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR012700 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 29064; Mature: 29064
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSAQSTPQPLLSVENLTHLYAPGKGFSDVSFQLYPGEVLGIVGESGSGKTTLLKAISAR CCCCCCCCCHHHHHHHHHHEECCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHH LAPQQGQIIYRTGTQQPVDLYEMAESQRRRLLRTEWGVVHQHPLDGLRPQVSAGGNIGER CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH LMATGQRHYGEIRQLAGRWLEDVEIPLSRLDDLPTTFSGGMQQRLQIARNLVTHPKLVFM HHHHCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE DEPTGGLDVSVQARLLDLLRNLVVEMQLAVVIVTHDLGVARLLANRLLVMKEGQVIESGL ECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHEECCCHHHCCC TDRVLDDPHHPYTQLLVSSVLQN CHHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MMSAQSTPQPLLSVENLTHLYAPGKGFSDVSFQLYPGEVLGIVGESGSGKTTLLKAISAR CCCCCCCCCHHHHHHHHHHEECCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHH LAPQQGQIIYRTGTQQPVDLYEMAESQRRRLLRTEWGVVHQHPLDGLRPQVSAGGNIGER CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH LMATGQRHYGEIRQLAGRWLEDVEIPLSRLDDLPTTFSGGMQQRLQIARNLVTHPKLVFM HHHHCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE DEPTGGLDVSVQARLLDLLRNLVVEMQLAVVIVTHDLGVARLLANRLLVMKEGQVIESGL ECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHEECCCHHHCCC TDRVLDDPHHPYTQLLVSSVLQN CHHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]