| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is aroP [H]
Identifier: 218930438
GI number: 218930438
Start: 3824787
End: 3826184
Strand: Direct
Name: aroP [H]
Synonym: YPO3421
Alternate gene names: 218930438
Gene position: 3824787-3826184 (Clockwise)
Preceding gene: 218930430
Following gene: 218930441
Centisome position: 82.19
GC content: 48.43
Gene sequence:
>1398_bases ATGAGTGATCAACAAGAGGGTGCTGAGCTAAAACGGGGGCTTAAAAACCGCCATATTCAGCTTATTGCCCTAGGTGGTGC AATTGGTACCGGACTATTCCTCGGCATAGCACAGACCATCAAAATGGCTGGGCCTTCGGTTTTACTGGGGTACGCAATTG GGGGTTTTATTGCGTTTCTGATAATGCGCCAGCTAGGCGAAATGGTGGTTGAAGAACCTGTAGCCGGTTCCTTTAGCCAC TTTGCGTATAAATATTGGGGACACTTTGCCGGTTTTGCTTCTGGCTGGAACTACTGGGTGCTGTATGTGTTGGTGGCGAT GGCCGAACTAACCGCAGTGGGGATCTATGTGCAATATTGGTGGCCAGAAATCCCTACCTGGGTCTCCGCCGCCGTCTTCT TCTTGGCCATCAACGCCATCAACCTGGCTAACGTAAAAGTCTATGGTGAGATGGAATTTTGGTTTGCCATCATTAAAGTG ATCGCGATTATTGCGATGATTTTATTTGGCGGTTACCTGCTCATCAGTGGCCGGGGTGGCCCAGAAGCCACGGTAACCAA CTTATGGGCCCAAGGCGGTTTCTTCCCGAATGGCATCATGGGTCTGGTGATGGCAATGGCGGTAATTATGTTCTCTTTCG GTGGCCTTGAATTAGTGGGTATCACCGCAGCAGAAGCAGAAGACCCGGCCAAAAGCATTCCGAAGGCAACCAATCAGGTT ATCTACCGTATTCTTCTGTTTTATATTGGTTCTCTGGCAATCTTGTTATCACTCTACCCATGGGGAAAAGTGGTCGAAGG CGGCAGCCCATTCGTATTGATTTTCGATGCGCTGGACAGTAATTCAGTCGCCACTGTCTTGAATATTGTCGTACTGACGG CGGCACTCTCGGTCTACAACAGTTGCGTATACTGTAACAGCCGCATGTTGTTTGGTTTAGCTAAACAAGGTAATGGCCCG AAAATCCTGTTGAAAGTGGATGGCCGAGGTGTTCCAGTCATTGCGATTGCTGTTTCTGCGTTTGCTACCGCGTTTTGTGT ACTGATTAACTACCTGTTACCTGGCCGTGCCTTTGAATTACTGATGGCATTAGTGGTATCCGCGTTGGTGATCAACTGGG CGATGATTAGCCTGGCACACCTGAAATTCCGTGCGGCGAAAAACCGCCAGGGCGTAATACCAAAATTCAAAGCATTTTGG TATCCGTTCGGTAACTGTTTGTGTTTGTTGTTCCTGACCGGCATCTTAGTGATCATGTTTCTGACACCCAGCATCCGGAT TTCAGTGATACTTATTCCTGTCTGGGTAGTCGTCCTAGCGATTGGTTATATTCTGAAGAATCAGAGCCAACGTCAGAATC AGCAACTGAGCGCTAGCAGCAGGAAAGTAACCAAGTAA
Upstream 100 bases:
>100_bases ATGAATATCGCTAGCGTCTCTGTAACGTCCAATGATGAAGGGTATAGCAAAAAACTAAGATTAAGCCCGCGAGTAGTCAC AACGACAAAGGATGTAATTG
Downstream 100 bases:
>100_bases AGAACAACCCATTTCCTTATAAATCCGCTAGTTAACCCTACCTAGGCCAGCACTTAGTGCTGGCCTAGGCTATTGACAAA GTACCTATGGCGAAGAGAAC
Product: aromatic amino acid transport protein
Products: L-tryptophan [Cytoplasm]; Proton [Cytoplasm]; Proton [Cytoplasm]; L-tyrosine [Cytoplasm]; Proton [Cytoplasm]; L-phenylalanine [Cytoplasm] [C]
Alternate protein names: General aromatic amino acid permease [H]
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MSDQQEGAELKRGLKNRHIQLIALGGAIGTGLFLGIAQTIKMAGPSVLLGYAIGGFIAFLIMRQLGEMVVEEPVAGSFSH FAYKYWGHFAGFASGWNYWVLYVLVAMAELTAVGIYVQYWWPEIPTWVSAAVFFLAINAINLANVKVYGEMEFWFAIIKV IAIIAMILFGGYLLISGRGGPEATVTNLWAQGGFFPNGIMGLVMAMAVIMFSFGGLELVGITAAEAEDPAKSIPKATNQV IYRILLFYIGSLAILLSLYPWGKVVEGGSPFVLIFDALDSNSVATVLNIVVLTAALSVYNSCVYCNSRMLFGLAKQGNGP KILLKVDGRGVPVIAIAVSAFATAFCVLINYLLPGRAFELLMALVVSALVINWAMISLAHLKFRAAKNRQGVIPKFKAFW YPFGNCLCLLFLTGILVIMFLTPSIRISVILIPVWVVVLAIGYILKNQSQRQNQQLSASSRKVTK
Sequences:
>Translated_465_residues MSDQQEGAELKRGLKNRHIQLIALGGAIGTGLFLGIAQTIKMAGPSVLLGYAIGGFIAFLIMRQLGEMVVEEPVAGSFSH FAYKYWGHFAGFASGWNYWVLYVLVAMAELTAVGIYVQYWWPEIPTWVSAAVFFLAINAINLANVKVYGEMEFWFAIIKV IAIIAMILFGGYLLISGRGGPEATVTNLWAQGGFFPNGIMGLVMAMAVIMFSFGGLELVGITAAEAEDPAKSIPKATNQV IYRILLFYIGSLAILLSLYPWGKVVEGGSPFVLIFDALDSNSVATVLNIVVLTAALSVYNSCVYCNSRMLFGLAKQGNGP KILLKVDGRGVPVIAIAVSAFATAFCVLINYLLPGRAFELLMALVVSALVINWAMISLAHLKFRAAKNRQGVIPKFKAFW YPFGNCLCLLFLTGILVIMFLTPSIRISVILIPVWVVVLAIGYILKNQSQRQNQQLSASSRKVTK >Mature_464_residues SDQQEGAELKRGLKNRHIQLIALGGAIGTGLFLGIAQTIKMAGPSVLLGYAIGGFIAFLIMRQLGEMVVEEPVAGSFSHF AYKYWGHFAGFASGWNYWVLYVLVAMAELTAVGIYVQYWWPEIPTWVSAAVFFLAINAINLANVKVYGEMEFWFAIIKVI AIIAMILFGGYLLISGRGGPEATVTNLWAQGGFFPNGIMGLVMAMAVIMFSFGGLELVGITAAEAEDPAKSIPKATNQVI YRILLFYIGSLAILLSLYPWGKVVEGGSPFVLIFDALDSNSVATVLNIVVLTAALSVYNSCVYCNSRMLFGLAKQGNGPK ILLKVDGRGVPVIAIAVSAFATAFCVLINYLLPGRAFELLMALVVSALVINWAMISLAHLKFRAAKNRQGVIPKFKAFWY PFGNCLCLLFLTGILVIMFLTPSIRISVILIPVWVVVLAIGYILKNQSQRQNQQLSASSRKVTK
Specific function: Permease that is involved in the transport across the cytoplasmic membrane of the aromatic amino acids (phenylalanine, tyrosine, and tryptophan) [H]
COG id: COG1113
COG function: function code E; Gamma-aminobutyrate permease and related permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Amino acid transporter (AAT) (TC 2.A.3.1) family [H]
Homologues:
Organism=Homo sapiens, GI110347453, Length=284, Percent_Identity=25, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI258645169, Length=368, Percent_Identity=22.0108695652174, Blast_Score=66, Evalue=6e-11, Organism=Escherichia coli, GI1786302, Length=451, Percent_Identity=76.0532150776053, Blast_Score=695, Evalue=0.0, Organism=Escherichia coli, GI1786789, Length=442, Percent_Identity=66.5158371040724, Blast_Score=593, Evalue=1e-170, Organism=Escherichia coli, GI1786602, Length=453, Percent_Identity=46.1368653421634, Blast_Score=354, Evalue=9e-99, Organism=Escherichia coli, GI48994972, Length=433, Percent_Identity=41.3394919168591, Blast_Score=331, Evalue=5e-92, Organism=Escherichia coli, GI1790653, Length=460, Percent_Identity=38.695652173913, Blast_Score=329, Evalue=2e-91, Organism=Escherichia coli, GI87081915, Length=449, Percent_Identity=37.1937639198218, Blast_Score=285, Evalue=3e-78, Organism=Escherichia coli, GI1789017, Length=434, Percent_Identity=36.405529953917, Blast_Score=276, Evalue=1e-75, Organism=Escherichia coli, GI87081708, Length=471, Percent_Identity=34.3949044585987, Blast_Score=267, Evalue=1e-72, Organism=Escherichia coli, GI1788480, Length=444, Percent_Identity=35.1351351351351, Blast_Score=240, Evalue=2e-64, Organism=Escherichia coli, GI87081869, Length=173, Percent_Identity=26.5895953757225, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6320772, Length=449, Percent_Identity=35.6347438752784, Blast_Score=235, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6324061, Length=436, Percent_Identity=34.4036697247706, Blast_Score=224, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6322892, Length=398, Percent_Identity=35.427135678392, Blast_Score=209, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6324924, Length=487, Percent_Identity=31.211498973306, Blast_Score=203, Evalue=5e-53, Organism=Saccharomyces cerevisiae, GI6324553, Length=394, Percent_Identity=33.248730964467, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6324059, Length=443, Percent_Identity=33.4085778781038, Blast_Score=189, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6319824, Length=404, Percent_Identity=31.6831683168317, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6321053, Length=423, Percent_Identity=31.9148936170213, Blast_Score=183, Evalue=6e-47, Organism=Saccharomyces cerevisiae, GI6320717, Length=408, Percent_Identity=29.656862745098, Blast_Score=177, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6324990, Length=445, Percent_Identity=30.1123595505618, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6319608, Length=441, Percent_Identity=28.1179138321995, Blast_Score=172, Evalue=9e-44, Organism=Saccharomyces cerevisiae, GI6321629, Length=406, Percent_Identity=28.8177339901478, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6320251, Length=402, Percent_Identity=28.8557213930348, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6319543, Length=400, Percent_Identity=30, Blast_Score=167, Evalue=5e-42, Organism=Saccharomyces cerevisiae, GI6322967, Length=396, Percent_Identity=29.040404040404, Blast_Score=166, Evalue=6e-42, Organism=Saccharomyces cerevisiae, GI6319542, Length=412, Percent_Identity=28.8834951456311, Blast_Score=158, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6324981, Length=396, Percent_Identity=28.030303030303, Blast_Score=142, Evalue=8e-35, Organism=Saccharomyces cerevisiae, GI6320364, Length=501, Percent_Identity=25.5489021956088, Blast_Score=111, Evalue=2e-25, Organism=Drosophila melanogaster, GI24667468, Length=373, Percent_Identity=24.1286863270777, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24668806, Length=379, Percent_Identity=24.0105540897098, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI21356285, Length=379, Percent_Identity=24.0105540897098, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI24668802, Length=379, Percent_Identity=24.0105540897098, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI24666159, Length=288, Percent_Identity=23.6111111111111, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI221512776, Length=344, Percent_Identity=22.3837209302326, Blast_Score=69, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 - InterPro: IPR004840 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 50610; Mature: 50479
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS00218 AMINO_ACID_PERMEASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQQEGAELKRGLKNRHIQLIALGGAIGTGLFLGIAQTIKMAGPSVLLGYAIGGFIAFL CCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH IMRQLGEMVVEEPVAGSFSHFAYKYWGHFAGFASGWNYWVLYVLVAMAELTAVGIYVQYW HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEE WPEIPTWVSAAVFFLAINAINLANVKVYGEMEFWFAIIKVIAIIAMILFGGYLLISGRGG CCCCCHHHHHHHHHHHHHHEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCEEEEECCCC PEATVTNLWAQGGFFPNGIMGLVMAMAVIMFSFGGLELVGITAAEAEDPAKSIPKATNQV CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHCCHHHHHH IYRILLFYIGSLAILLSLYPWGKVVEGGSPFVLIFDALDSNSVATVLNIVVLTAALSVYN HHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH SCVYCNSRMLFGLAKQGNGPKILLKVDGRGVPVIAIAVSAFATAFCVLINYLLPGRAFEL HHHEECCHHHEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH LMALVVSALVINWAMISLAHLKFRAAKNRQGVIPKFKAFWYPFGNCLCLLFLTGILVIMF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH LTPSIRISVILIPVWVVVLAIGYILKNQSQRQNQQLSASSRKVTK HCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure SDQQEGAELKRGLKNRHIQLIALGGAIGTGLFLGIAQTIKMAGPSVLLGYAIGGFIAFL CCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH IMRQLGEMVVEEPVAGSFSHFAYKYWGHFAGFASGWNYWVLYVLVAMAELTAVGIYVQYW HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEE WPEIPTWVSAAVFFLAINAINLANVKVYGEMEFWFAIIKVIAIIAMILFGGYLLISGRGG CCCCCHHHHHHHHHHHHHHEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCEEEEECCCC PEATVTNLWAQGGFFPNGIMGLVMAMAVIMFSFGGLELVGITAAEAEDPAKSIPKATNQV CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHCCHHHHHH IYRILLFYIGSLAILLSLYPWGKVVEGGSPFVLIFDALDSNSVATVLNIVVLTAALSVYN HHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH SCVYCNSRMLFGLAKQGNGPKILLKVDGRGVPVIAIAVSAFATAFCVLINYLLPGRAFEL HHHEECCHHHEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH LMALVVSALVINWAMISLAHLKFRAAKNRQGVIPKFKAFWYPFGNCLCLLFLTGILVIMF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH LTPSIRISVILIPVWVVVLAIGYILKNQSQRQNQQLSASSRKVTK HCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-tryptophan [Periplasm]; Proton [Periplasm]; Proton [Periplasm]; L-tyrosine [Periplasm]; Proton [Periplasm]; L-phenylalanine [Periplasm] [C]
Specific reaction: L-tryptophan [Periplasm] + Proton [Periplasm] = L-tryptophan [Cytoplasm] + Proton [Cytoplasm] Proton [Periplasm] + L-tyrosine [Periplasm] = Proton [Cytoplasm] + L-tyrosine [Cytoplasm] Proton [Periplasm] + L-phenylalanine [Periplasm] = Proton [Cytoplasm] +
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]