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The map label for this gene is yqaA [H]

Identifier: 218930323

GI number: 218930323

Start: 3681019

End: 3681447

Strand: Reverse

Name: yqaA [H]

Synonym: YPO3302

Alternate gene names: 218930323

Gene position: 3681447-3681019 (Counterclockwise)

Preceding gene: 218930324

Following gene: 218930322

Centisome position: 79.11

GC content: 47.79

Gene sequence:

>429_bases
GTGAGTAATACTCTTGCAATTGCTTCATTATTCGGGAGTAGCTTTCTCAGTGCGACGCTCTTACCCGGCAATTCTGAAAT
TCTGTTGGTCACCCTATTAACTGCGGGTAGTGCGCCCGCAGCGATATTGGTGTTATCTGCTACTGTCGGAAACACCCTAG
GGGGATTAACCAATGTTGTTATAGGTCGTTTATTACCGGAATTAAAGCCACAGCGTGGTATGGGGGTGGCACTTGGCTGG
CTCCAACGCTTCGGTCCGGCAGCTCTGTTATTAAGCTGGTTACCGATAGTAGGCGATTTGATGTGCGTGTTGGCAGGCTG
GTTGCGTATGCCTTGGGGTTTTGTGGCTTTTTTCTTATTTTTGGGAAAAGCATTGCGTTACATCGTGTTAACGATGATTA
CGTTGCAAGGGATCGCTTGGTGGCAATAA

Upstream 100 bases:

>100_bases
TCGGTGTACGTCCAGATAAGTGCATTGTCTTCGAAGATGCTGATTTTGGTGTAGAAGCGGCAAAACGAGCGAATATGGCA
ATAGTTGATGTACGTCTGCT

Downstream 100 bases:

>100_bases
TAGATGTGACAAACTTACGTAGTCACATCTATGCAGTTTCAGTATGCTGATGAGTTATGGTTTTCAAGAGCGGGAGGTCG
ATTTGATCCCGGATGTATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSNTLAIASLFGSSFLSATLLPGNSEILLVTLLTAGSAPAAILVLSATVGNTLGGLTNVVIGRLLPELKPQRGMGVALGW
LQRFGPAALLLSWLPIVGDLMCVLAGWLRMPWGFVAFFLFLGKALRYIVLTMITLQGIAWWQ

Sequences:

>Translated_142_residues
MSNTLAIASLFGSSFLSATLLPGNSEILLVTLLTAGSAPAAILVLSATVGNTLGGLTNVVIGRLLPELKPQRGMGVALGW
LQRFGPAALLLSWLPIVGDLMCVLAGWLRMPWGFVAFFLFLGKALRYIVLTMITLQGIAWWQ
>Mature_141_residues
SNTLAIASLFGSSFLSATLLPGNSEILLVTLLTAGSAPAAILVLSATVGNTLGGLTNVVIGRLLPELKPQRGMGVALGWL
QRFGPAALLLSWLPIVGDLMCVLAGWLRMPWGFVAFFLFLGKALRYIVLTMITLQGIAWWQ

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=142, Percent_Identity=58.4507042253521, Blast_Score=168, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 15111; Mature: 14980

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTLAIASLFGSSFLSATLLPGNSEILLVTLLTAGSAPAAILVLSATVGNTLGGLTNVV
CCCHHHHHHHHHHHHHHHEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
IGRLLPELKPQRGMGVALGWLQRFGPAALLLSWLPIVGDLMCVLAGWLRMPWGFVAFFLF
HHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LGKALRYIVLTMITLQGIAWWQ
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNTLAIASLFGSSFLSATLLPGNSEILLVTLLTAGSAPAAILVLSATVGNTLGGLTNVV
CCHHHHHHHHHHHHHHHEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
IGRLLPELKPQRGMGVALGWLQRFGPAALLLSWLPIVGDLMCVLAGWLRMPWGFVAFFLF
HHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LGKALRYIVLTMITLQGIAWWQ
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]