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The map label for this gene is amaB [H]

Identifier: 218930276

GI number: 218930276

Start: 3623524

End: 3624816

Strand: Reverse

Name: amaB [H]

Synonym: YPO3249

Alternate gene names: 218930276

Gene position: 3624816-3623524 (Counterclockwise)

Preceding gene: 218930279

Following gene: 218930275

Centisome position: 77.89

GC content: 56.38

Gene sequence:

>1293_bases
ATGAGCGTAACCCTACCGGATATCGAGGCTGAACAGGCTGCATTACAGGTCTTGGCCCGTTGTGACGTATTGGCGGCAAT
CAGTGAATCCCCCGAAGGGCTGACTCGGGTCTATCTATCTCCTGAACATTTACGGGCAAATCGGCAAGTCGGTGAATGGA
TGCAAGCGGTTGGTATGCAGGTTTGGCAGGATACCGTGGGGAATATTTGTGGCCGTTATGAAGGGCGACAACCGGATGCC
CCCGCCATCTTGTTAGGTTCTCATCTGGATACGGTGCGCAATGCGGGCCGCTATGATGGCATGTTAGGGGTATTAACTGC
GCTGGAGGTCGTGGGGTACTTACATCGTCATCAGCAACGTTTACCGGTCGCCATTGAAGTGATTGGTTTTGCTGATGAAG
AGGGAACGCGGTTTGGCATCACCCTGCTTGGCAGTAAAGGGGTGACGGGGCGTTGGCCTGTGGAGTGGTTAAATACGACC
GATGCCGATGGCATCAGTGTCGCGCAAGCGATGGTTCGTGCCGGTTTAGATCCAATGGACATCGGGCAATCTGCGCGTGC
AGCCAATGCCTTCTGCGCCTATCTTGAACTGCATATTGAGCAGGGGCCGTGTTTAGAAAACGCGGGTTTGGCGCTGGGTG
TGGTGACGGATATTAATGGCGCGCGCCGTTTACAATGTCAGTTTACCGGGTTGGCGGGCCATGCGGGGACCGTACCGATG
GGGCAACGGCAAGATGCATTGGCCGGTGCCGCTGAATGGATGTGTGTCGTAGAGGCATTGACTGCGGCTCAGGGGGAGCA
TTTAGTGGCGACGGTAGGGACGTTGACGTGTCTGCCCGGTGCAGTGAATGTAATCCCCGGTCAAGTGAGGCTGACACTGG
ATATTCGCGGCCCAAATGACCGTGGGGTGAATGATTTATTGACCCGTCTATTGGCTGAGGCTGAAGCGATCGCCACGCGT
CGTGGCATAACGTTTGCCGCCGAAGGGTTTTACCGTATCAAGGCAACGGCTTGTGATAGTGCTTTGCAGCAGTGCATCAG
CCAGAGTATCAGCCAGGTGCAGGGCCGTTGTTTAGCGCTGCCCAGTGGCGCGGGCCATGATGCGATAGCCATGGCGGAGT
GCTGGCCAGTCGGGATGCTATTTGTCCGCTGTAAAGGCGGCGTCAGCCATCATCCAGATGAGTCCGTCACGAGTAGTGAT
GTTGCGGTGGCGATTCAGGCGTATCTGGAGGCTGTTCTTACGTCTCCTTCGTCCCCTTCGTCCCCTTCGTCCTTGACGCC
GCAGCGGTGTTAG

Upstream 100 bases:

>100_bases
GTGCTCATCAGGTGGATAGTGCGCATCAGGTGGATAGTACTCATCAGGCGGATAGTGCTCAAAGGAATAGCGATCATGCT
CAACTGAATGGAGCGAATTG

Downstream 100 bases:

>100_bases
CGGCTCTCACTCGCCTGAATCACTGACTGATGTCAGCTCATCAGGACTCATTCGTTTGCTGCCTTGCTGCAACGCCAATG
ACGTCGGGGATCCCCCTTTT

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MSVTLPDIEAEQAALQVLARCDVLAAISESPEGLTRVYLSPEHLRANRQVGEWMQAVGMQVWQDTVGNICGRYEGRQPDA
PAILLGSHLDTVRNAGRYDGMLGVLTALEVVGYLHRHQQRLPVAIEVIGFADEEGTRFGITLLGSKGVTGRWPVEWLNTT
DADGISVAQAMVRAGLDPMDIGQSARAANAFCAYLELHIEQGPCLENAGLALGVVTDINGARRLQCQFTGLAGHAGTVPM
GQRQDALAGAAEWMCVVEALTAAQGEHLVATVGTLTCLPGAVNVIPGQVRLTLDIRGPNDRGVNDLLTRLLAEAEAIATR
RGITFAAEGFYRIKATACDSALQQCISQSISQVQGRCLALPSGAGHDAIAMAECWPVGMLFVRCKGGVSHHPDESVTSSD
VAVAIQAYLEAVLTSPSSPSSPSSLTPQRC

Sequences:

>Translated_430_residues
MSVTLPDIEAEQAALQVLARCDVLAAISESPEGLTRVYLSPEHLRANRQVGEWMQAVGMQVWQDTVGNICGRYEGRQPDA
PAILLGSHLDTVRNAGRYDGMLGVLTALEVVGYLHRHQQRLPVAIEVIGFADEEGTRFGITLLGSKGVTGRWPVEWLNTT
DADGISVAQAMVRAGLDPMDIGQSARAANAFCAYLELHIEQGPCLENAGLALGVVTDINGARRLQCQFTGLAGHAGTVPM
GQRQDALAGAAEWMCVVEALTAAQGEHLVATVGTLTCLPGAVNVIPGQVRLTLDIRGPNDRGVNDLLTRLLAEAEAIATR
RGITFAAEGFYRIKATACDSALQQCISQSISQVQGRCLALPSGAGHDAIAMAECWPVGMLFVRCKGGVSHHPDESVTSSD
VAVAIQAYLEAVLTSPSSPSSPSSLTPQRC
>Mature_429_residues
SVTLPDIEAEQAALQVLARCDVLAAISESPEGLTRVYLSPEHLRANRQVGEWMQAVGMQVWQDTVGNICGRYEGRQPDAP
AILLGSHLDTVRNAGRYDGMLGVLTALEVVGYLHRHQQRLPVAIEVIGFADEEGTRFGITLLGSKGVTGRWPVEWLNTTD
ADGISVAQAMVRAGLDPMDIGQSARAANAFCAYLELHIEQGPCLENAGLALGVVTDINGARRLQCQFTGLAGHAGTVPMG
QRQDALAGAAEWMCVVEALTAAQGEHLVATVGTLTCLPGAVNVIPGQVRLTLDIRGPNDRGVNDLLTRLLAEAEAIATRR
GITFAAEGFYRIKATACDSALQQCISQSISQVQGRCLALPSGAGHDAIAMAECWPVGMLFVRCKGGVSHHPDESVTSSDV
AVAIQAYLEAVLTSPSSPSSPSSLTPQRC

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=377, Percent_Identity=33.1564986737401, Blast_Score=186, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 45511; Mature: 45380

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00758 ARGE_DAPE_CPG2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTLPDIEAEQAALQVLARCDVLAAISESPEGLTRVYLSPEHLRANRQVGEWMQAVGMQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
VWQDTVGNICGRYEGRQPDAPAILLGSHLDTVRNAGRYDGMLGVLTALEVVGYLHRHQQR
HHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
LPVAIEVIGFADEEGTRFGITLLGSKGVTGRWPVEWLNTTDADGISVAQAMVRAGLDPMD
CCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCHHCCCCCCCCHHHHHHHHHHCCCCHHH
IGQSARAANAFCAYLELHIEQGPCLENAGLALGVVTDINGARRLQCQFTGLAGHAGTVPM
CCCCHHHHHHHEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCC
GQRQDALAGAAEWMCVVEALTAAQGEHLVATVGTLTCLPGAVNVIPGQVRLTLDIRGPND
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCCEECCCEEEEEEEEECCCC
RGVNDLLTRLLAEAEAIATRRGITFAAEGFYRIKATACDSALQQCISQSISQVQGRCLAL
CCHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHCCEEEEC
PSGAGHDAIAMAECWPVGMLFVRCKGGVSHHPDESVTSSDVAVAIQAYLEAVLTSPSSPS
CCCCCCCCEEHHHHHHHCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
SPSSLTPQRC
CCCCCCCCCC
>Mature Secondary Structure 
SVTLPDIEAEQAALQVLARCDVLAAISESPEGLTRVYLSPEHLRANRQVGEWMQAVGMQ
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
VWQDTVGNICGRYEGRQPDAPAILLGSHLDTVRNAGRYDGMLGVLTALEVVGYLHRHQQR
HHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
LPVAIEVIGFADEEGTRFGITLLGSKGVTGRWPVEWLNTTDADGISVAQAMVRAGLDPMD
CCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCHHCCCCCCCCHHHHHHHHHHCCCCHHH
IGQSARAANAFCAYLELHIEQGPCLENAGLALGVVTDINGARRLQCQFTGLAGHAGTVPM
CCCCHHHHHHHEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCC
GQRQDALAGAAEWMCVVEALTAAQGEHLVATVGTLTCLPGAVNVIPGQVRLTLDIRGPND
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCCEECCCEEEEEEEEECCCC
RGVNDLLTRLLAEAEAIATRRGITFAAEGFYRIKATACDSALQQCISQSISQVQGRCLAL
CCHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHCCEEEEC
PSGAGHDAIAMAECWPVGMLFVRCKGGVSHHPDESVTSSDVAVAIQAYLEAVLTSPSSPS
CCCCCCCCEEHHHHHHHCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
SPSSLTPQRC
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]