| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930216
Identifier: 218930216
GI number: 218930216
Start: 3547655
End: 3548350
Strand: Reverse
Name: 218930216
Synonym: YPO3186
Alternate gene names: NA
Gene position: 3548350-3547655 (Counterclockwise)
Preceding gene: 218930217
Following gene: 218930215
Centisome position: 76.25
GC content: 34.48
Gene sequence:
>696_bases ATGACTGTTAGTTATGTCGGGCGAGGAGAGTCACTTTCATGGGTATATGGAGTGGACAATGTGAATATACCAAATTCAGA TGTGGTTGATTCACCTTTTAATGACTTCACTCAATTTGATAATATGGATTTTTCGGCTAATTATAATTCTATTTTATCGA GAGAAAATAAATCGCTAATTACGTCATTTATAAGTGAATATAATGATAAGGTTAAGAGGTTAAGTGCAGATGAAAATTAT ATTTTAACTCAAAAATATATTTCATCACTGGATGAAATGTGTGAGGAAATAAATAAAAAATTACTTTATTGTCATGATAG TAAAGTATTAAAAAATGTTTTAGATTCGACGCTGCAAAAGCAAACTGAAATGAGTAAATACATAGTGTTACTGGAAGGTG TGCCTTATCGCATTGAACCAAGAGATATCGCAGCTGACATTACGAATGAACGAATAAATGGTGCTATAGAGTTATTGAAT TTTGTTGCCAAGGCTTACCCGAAAATAGCGAAGGAATCCGCTAAGTTGCAGCGATCCCGACCCCATGCCAATTGCAGTGT TGAGACGTTGAATGACTATTTAGAACAGTTAAAAAAATATTGTCAGGCAAGAAACTACTCAGTAATAGAAGACAACGCTC TTCATCAATTCATTTTAAAGACGCATGGGGTGGCGGTGATAAGTCTGGACGAATAA
Upstream 100 bases:
>100_bases GTTACTGATAAGTTTATTATTTTTCTGATAGTTAATAAATTCGTGATCAGTCACCTTTAAAAGGTAAATAAAATACAGGC TGATATTAAAAGGAATATTT
Downstream 100 bases:
>100_bases ATGCGCAAAAAAACGTAGAGATTAATAAGAAAATGGAAGGTATCTATATTGGATTCACTCAGCGAACGATAGAGAGTCAG ACTGAAAATCAGTCTGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MTVSYVGRGESLSWVYGVDNVNIPNSDVVDSPFNDFTQFDNMDFSANYNSILSRENKSLITSFISEYNDKVKRLSADENY ILTQKYISSLDEMCEEINKKLLYCHDSKVLKNVLDSTLQKQTEMSKYIVLLEGVPYRIEPRDIAADITNERINGAIELLN FVAKAYPKIAKESAKLQRSRPHANCSVETLNDYLEQLKKYCQARNYSVIEDNALHQFILKTHGVAVISLDE
Sequences:
>Translated_231_residues MTVSYVGRGESLSWVYGVDNVNIPNSDVVDSPFNDFTQFDNMDFSANYNSILSRENKSLITSFISEYNDKVKRLSADENY ILTQKYISSLDEMCEEINKKLLYCHDSKVLKNVLDSTLQKQTEMSKYIVLLEGVPYRIEPRDIAADITNERINGAIELLN FVAKAYPKIAKESAKLQRSRPHANCSVETLNDYLEQLKKYCQARNYSVIEDNALHQFILKTHGVAVISLDE >Mature_230_residues TVSYVGRGESLSWVYGVDNVNIPNSDVVDSPFNDFTQFDNMDFSANYNSILSRENKSLITSFISEYNDKVKRLSADENYI LTQKYISSLDEMCEEINKKLLYCHDSKVLKNVLDSTLQKQTEMSKYIVLLEGVPYRIEPRDIAADITNERINGAIELLNF VAKAYPKIAKESAKLQRSRPHANCSVETLNDYLEQLKKYCQARNYSVIEDNALHQFILKTHGVAVISLDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26429; Mature: 26298
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSYVGRGESLSWVYGVDNVNIPNSDVVDSPFNDFTQFDNMDFSANYNSILSRENKSLI CEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHCHHHHH TSFISEYNDKVKRLSADENYILTQKYISSLDEMCEEINKKLLYCHDSKVLKNVLDSTLQK HHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHH QTEMSKYIVLLEGVPYRIEPRDIAADITNERINGAIELLNFVAKAYPKIAKESAKLQRSR HHHHHHEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PHANCSVETLNDYLEQLKKYCQARNYSVIEDNALHQFILKTHGVAVISLDE CCCCCHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHCCEEEEEECC >Mature Secondary Structure TVSYVGRGESLSWVYGVDNVNIPNSDVVDSPFNDFTQFDNMDFSANYNSILSRENKSLI EEEECCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHCHHHHH TSFISEYNDKVKRLSADENYILTQKYISSLDEMCEEINKKLLYCHDSKVLKNVLDSTLQK HHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHH QTEMSKYIVLLEGVPYRIEPRDIAADITNERINGAIELLNFVAKAYPKIAKESAKLQRSR HHHHHHEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PHANCSVETLNDYLEQLKKYCQARNYSVIEDNALHQFILKTHGVAVISLDE CCCCCHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA