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The map label for this gene is napC [H]

Identifier: 218930081

GI number: 218930081

Start: 3389872

End: 3390474

Strand: Reverse

Name: napC [H]

Synonym: YPO3036

Alternate gene names: 218930081

Gene position: 3390474-3389872 (Counterclockwise)

Preceding gene: 218930082

Following gene: 218930080

Centisome position: 72.86

GC content: 45.94

Gene sequence:

>603_bases
ATGATGAGCGAGACTAAAAAACCCGGTTTTATCCGTCGGTTATGGCAGTGGTGGCGTAGACCAAGTCGTCTGGCACTCGG
TACCTTACTGCTGATTGGTTTTGTCAGTGGCATTATCTTCTGGGGCGGTTTTAATACCGGGATGGAAATGGCGAATACCG
AAAAATTCTGTATCAGTTGCCATGAGATGAAAGATAACGTCTATGAGGAATACATGAGTACCATTCACTACAGCAACCGC
AGTGGCGTGAAAGCAACCTGCCCCGATTGCCACGTACCCCATGAGTGGGGGCCTAAAATGGTACGTAAGATTAAAGCCAG
TAAAGAGCTGTATGCCAAAGCCTTTGGTTTGATTGATACACCGCAGAAATTTGACGCTCATCGCCTGACGATGGCAGAAA
GTGAGTGGGCGCGGATGAAAGCCAATGATTCGCAAGAATGTCGCAACTGTCATAATTTCGATAATATGGATTTCAGCGCA
CAAAAAACGGTGGCGGCGAAAATGCACAGCCAAGCCATTACTGAAGGTAAAACCTGTATTGATTGCCATAAAGGGATTGC
CCATAAGTTGCCGGATATGAAAGATGTACCTATTGGTTTTTAG

Upstream 100 bases:

>100_bases
GTGTCATGTGCCACAAACCGACGCGGCACCGATTGTTGGTAATAGCTTCCAGCCAGCACCTGGCTTTGGTCAGTAACCGA
GATGAGTGATAAGCGAGGGC

Downstream 100 bases:

>100_bases
GACGCCCTTCTCCTTGATGCCGAGGGGGGGTTAGCCGCACGATTTTGGGTATACGTCGGAGAGTGATGATTAACGCCCTG
TGGACTTTGCGTCGGCAGGG

Product: cytochrome c-type protein NapC

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MMSETKKPGFIRRLWQWWRRPSRLALGTLLLIGFVSGIIFWGGFNTGMEMANTEKFCISCHEMKDNVYEEYMSTIHYSNR
SGVKATCPDCHVPHEWGPKMVRKIKASKELYAKAFGLIDTPQKFDAHRLTMAESEWARMKANDSQECRNCHNFDNMDFSA
QKTVAAKMHSQAITEGKTCIDCHKGIAHKLPDMKDVPIGF

Sequences:

>Translated_200_residues
MMSETKKPGFIRRLWQWWRRPSRLALGTLLLIGFVSGIIFWGGFNTGMEMANTEKFCISCHEMKDNVYEEYMSTIHYSNR
SGVKATCPDCHVPHEWGPKMVRKIKASKELYAKAFGLIDTPQKFDAHRLTMAESEWARMKANDSQECRNCHNFDNMDFSA
QKTVAAKMHSQAITEGKTCIDCHKGIAHKLPDMKDVPIGF
>Mature_200_residues
MMSETKKPGFIRRLWQWWRRPSRLALGTLLLIGFVSGIIFWGGFNTGMEMANTEKFCISCHEMKDNVYEEYMSTIHYSNR
SGVKATCPDCHVPHEWGPKMVRKIKASKELYAKAFGLIDTPQKFDAHRLTMAESEWARMKANDSQECRNCHNFDNMDFSA
QKTVAAKMHSQAITEGKTCIDCHKGIAHKLPDMKDVPIGF

Specific function: Mediates electron flow from quinones to the NapAB complex [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788530, Length=200, Percent_Identity=75.5, Blast_Score=343, Evalue=7e-96,
Organism=Escherichia coli, GI1787230, Length=185, Percent_Identity=47.027027027027, Blast_Score=179, Evalue=1e-46,
Organism=Escherichia coli, GI1788181, Length=140, Percent_Identity=49.2857142857143, Blast_Score=150, Evalue=6e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011031
- InterPro:   IPR005126
- InterPro:   IPR011885 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 22942; Mature: 22942

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSETKKPGFIRRLWQWWRRPSRLALGTLLLIGFVSGIIFWGGFNTGMEMANTEKFCISC
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHH
HEMKDNVYEEYMSTIHYSNRSGVKATCPDCHVPHEWGPKMVRKIKASKELYAKAFGLIDT
HHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PQKFDAHRLTMAESEWARMKANDSQECRNCHNFDNMDFSAQKTVAAKMHSQAITEGKTCI
CCHHCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH
DCHKGIAHKLPDMKDVPIGF
HHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MMSETKKPGFIRRLWQWWRRPSRLALGTLLLIGFVSGIIFWGGFNTGMEMANTEKFCISC
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHH
HEMKDNVYEEYMSTIHYSNRSGVKATCPDCHVPHEWGPKMVRKIKASKELYAKAFGLIDT
HHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PQKFDAHRLTMAESEWARMKANDSQECRNCHNFDNMDFSAQKTVAAKMHSQAITEGKTCI
CCHHCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH
DCHKGIAHKLPDMKDVPIGF
HHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]