| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929413
Identifier: 218929413
GI number: 218929413
Start: 2608047
End: 2608361
Strand: Reverse
Name: 218929413
Synonym: YPO2321
Alternate gene names: NA
Gene position: 2608361-2608047 (Counterclockwise)
Preceding gene: 218929414
Following gene: 218929412
Centisome position: 56.05
GC content: 46.35
Gene sequence:
>315_bases TTGTTACGGTTGGCACAGAGGGAGTTAGTAAGATTACCCGTAGGCATACAGGCGGTACTGATTAAGGCGATGGATGAGCT TGAAGCTTGTGGTCATGAACTGAGAGAGCCTTATGTACGGGATATGGGGCAGGGGTTAAAAGAATTACGCGTAAGCGCTA AAGAAGGTATCGGGCGTGGTTTTTTCTTTTGCCACCTCCATCGGCAGGTTTATATCATTCACCTCCTACAGAAAAAAACA CAGAAAACCCCAAGACGGACACTGATATTGGCTTATCGGCGCATGAAAGAACTCAAACGGAGATTGCAGTCATGA
Upstream 100 bases:
>100_bases GTTGAAAGTTTGTCTGATTCTGGGTCACCATATTTGATTACCTATGGTGAGTTTGATACCGTTTTTCACGGAGCAGGGAC GGCTTATGTATAAGATTAGT
Downstream 100 bases:
>100_bases AAAAAACAGACGATTTTGACATCATTCCTTTTGCGGTGGTTAAAGCAGCAGCGTTGAGTCATCCGCAGGTGAATGACGCC TATACGGATTTACAAATTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MLRLAQRELVRLPVGIQAVLIKAMDELEACGHELREPYVRDMGQGLKELRVSAKEGIGRGFFFCHLHRQVYIIHLLQKKT QKTPRRTLILAYRRMKELKRRLQS
Sequences:
>Translated_104_residues MLRLAQRELVRLPVGIQAVLIKAMDELEACGHELREPYVRDMGQGLKELRVSAKEGIGRGFFFCHLHRQVYIIHLLQKKT QKTPRRTLILAYRRMKELKRRLQS >Mature_104_residues MLRLAQRELVRLPVGIQAVLIKAMDELEACGHELREPYVRDMGQGLKELRVSAKEGIGRGFFFCHLHRQVYIIHLLQKKT QKTPRRTLILAYRRMKELKRRLQS
Specific function: Unknown
COG id: COG4679
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12280; Mature: 12280
Theoretical pI: Translated: 11.17; Mature: 11.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLAQRELVRLPVGIQAVLIKAMDELEACGHELREPYVRDMGQGLKELRVSAKEGIGRG CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH FFFCHLHRQVYIIHLLQKKTQKTPRRTLILAYRRMKELKRRLQS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLRLAQRELVRLPVGIQAVLIKAMDELEACGHELREPYVRDMGQGLKELRVSAKEGIGRG CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH FFFCHLHRQVYIIHLLQKKTQKTPRRTLILAYRRMKELKRRLQS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA