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The map label for this gene is gspD [C]

Identifier: 218929372

GI number: 218929372

Start: 2560790

End: 2562034

Strand: Direct

Name: gspD [C]

Synonym: YPO2280

Alternate gene names: 218929372

Gene position: 2560790-2562034 (Clockwise)

Preceding gene: 218929371

Following gene: 218929373

Centisome position: 55.03

GC content: 45.22

Gene sequence:

>1245_bases
ATGAAAAAGATTTTACTTGCATTAACGCTACTATTTTCTTCATGTGCTTTCGCAGGGTCAGAGCTTGAATTAAATAAAGT
CAAGCTACCGGAGGCTATTTCTCTTATTTACAGTGAGGTGCTTAAAGTCCCGTATATGCTAGATCCACAGCTTGTTAATG
ATGAACGAATGATTACATTCAGGTTAACACCTGATATTGATGAACGGGAATTTGTAACCCGTTATCTTGGCAATATGAAC
ATTCGAATATGGACGAAAAAGGGTGTTGATTTTATCGCGCCCTATACGCCGAAAGAGCCGGTTAAGCCACGTTATACATG
GACTTATACGCCTCAGTACCGTTCTGTTGCCTACCTGTCTGATATTCTTGGCGGCTACGTTTCAGGCTCCTTCAATAACA
GTGGAGCCGTGATTTCTGACGATTCGCTAAAAGGTTCATCAGGGGCAAGCAACTACATCAATCGAACCGGTGATATTCTG
GTTTATTATGGTACGAAAGAGGATATCGCCATCCTGAAAACACTGGTCACTTCGCTGGATACGATGAGTGATGAAGTGGT
TGTTTCTGGTTATGTTTTTGAGGTTCAGACCTCGCAGTCTGACGGCTCCGGCATTCTTTTAGCGGCTAAAATTCTGTCTG
ATAAATTCAATATTTCAGTTGGTGCTGCCGGACTGGATAATTTTATCAATATTCGAACCGGCTCCATTGATGCCATTTTC
AATCTGCTGAAAACCGACAGTCGTTTTACTGTTGTCAGTGCGCCGCGACTGCGGGTAAAAAATAATGCCTCAGCGTCTTT
TTCAGTCGGCTCTGATGTGCCAGTACTGGGCAGTGTTACGGTGAATAACAATACGACAACGCAATCCGTTGAATATCGTT
CCAGCGGTGTTTTGTTTAACGTGACGCCATCAATCAAAAGTCGGACAATGGATCTCAAGATTCAGCAGCAGCTTTCCAAC
TTTGTGACCACTGAAACCGGCGTCAATAACTCGCCAACCCTTATCAAGCGTGATGTAACAACCGAAGTCAGCCTTGCAGA
TGGTGATATTATTTTACTTGGTGGCCTTGCTGAACAGAAAGACAGTAAGGCCAGTTCCGGCTGGAGCTTCTTCGGTTCCC
GTACCAGTGAAAGCAACAAGACTGATATTATGGTGATGCTTCAGGTCAGAAAGGTTGACCGGAGCAGGGCGACGCCCCGC
AGCGCCGCGAGGAGCGGTGAACTGTTCCGGGACAACCTAAACTGA

Upstream 100 bases:

>100_bases
TTTTGCGTGCCGTTCCTGCATCCAGTTTTAATTACAAAGGGATGTTGATGAGCGGAATTATTGATGGTGAGCGTGTGACG
CTTTATACGGGGAAAAAATA

Downstream 100 bases:

>100_bases
TTGTATGGATTTTTATTATGGCGTTAACTTTTATGGGGTATGAACAGTACGACATCTTCTAGGTATTCAGTTACTTAGAG
GATTTATTATGTCTGTAAAA

Product: putative phage-related secreted protein

Products: NA

Alternate protein names: Phage-Related Secreted Protein; Type II Secretory Pathway Component PulD; Type II/III Secretion System Protein; Bacteriophage-Related Lipoprotein; General Secretion Pathway Protein D; PulD Family Bacteriophage Secretion Protein

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MKKILLALTLLFSSCAFAGSELELNKVKLPEAISLIYSEVLKVPYMLDPQLVNDERMITFRLTPDIDEREFVTRYLGNMN
IRIWTKKGVDFIAPYTPKEPVKPRYTWTYTPQYRSVAYLSDILGGYVSGSFNNSGAVISDDSLKGSSGASNYINRTGDIL
VYYGTKEDIAILKTLVTSLDTMSDEVVVSGYVFEVQTSQSDGSGILLAAKILSDKFNISVGAAGLDNFINIRTGSIDAIF
NLLKTDSRFTVVSAPRLRVKNNASASFSVGSDVPVLGSVTVNNNTTTQSVEYRSSGVLFNVTPSIKSRTMDLKIQQQLSN
FVTTETGVNNSPTLIKRDVTTEVSLADGDIILLGGLAEQKDSKASSGWSFFGSRTSESNKTDIMVMLQVRKVDRSRATPR
SAARSGELFRDNLN

Sequences:

>Translated_414_residues
MKKILLALTLLFSSCAFAGSELELNKVKLPEAISLIYSEVLKVPYMLDPQLVNDERMITFRLTPDIDEREFVTRYLGNMN
IRIWTKKGVDFIAPYTPKEPVKPRYTWTYTPQYRSVAYLSDILGGYVSGSFNNSGAVISDDSLKGSSGASNYINRTGDIL
VYYGTKEDIAILKTLVTSLDTMSDEVVVSGYVFEVQTSQSDGSGILLAAKILSDKFNISVGAAGLDNFINIRTGSIDAIF
NLLKTDSRFTVVSAPRLRVKNNASASFSVGSDVPVLGSVTVNNNTTTQSVEYRSSGVLFNVTPSIKSRTMDLKIQQQLSN
FVTTETGVNNSPTLIKRDVTTEVSLADGDIILLGGLAEQKDSKASSGWSFFGSRTSESNKTDIMVMLQVRKVDRSRATPR
SAARSGELFRDNLN
>Mature_414_residues
MKKILLALTLLFSSCAFAGSELELNKVKLPEAISLIYSEVLKVPYMLDPQLVNDERMITFRLTPDIDEREFVTRYLGNMN
IRIWTKKGVDFIAPYTPKEPVKPRYTWTYTPQYRSVAYLSDILGGYVSGSFNNSGAVISDDSLKGSSGASNYINRTGDIL
VYYGTKEDIAILKTLVTSLDTMSDEVVVSGYVFEVQTSQSDGSGILLAAKILSDKFNISVGAAGLDNFINIRTGSIDAIF
NLLKTDSRFTVVSAPRLRVKNNASASFSVGSDVPVLGSVTVNNNTTTQSVEYRSSGVLFNVTPSIKSRTMDLKIQQQLSN
FVTTETGVNNSPTLIKRDVTTEVSLADGDIILLGGLAEQKDSKASSGWSFFGSRTSESNKTDIMVMLQVRKVDRSRATPR
SAARSGELFRDNLN

Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45396; Mature: 45396

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILLALTLLFSSCAFAGSELELNKVKLPEAISLIYSEVLKVPYMLDPQLVNDERMITF
CHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCEECCEEECCCEEEEE
RLTPDIDEREFVTRYLGNMNIRIWTKKGVDFIAPYTPKEPVKPRYTWTYTPQYRSVAYLS
EECCCCCHHHHHHHHHCCCEEEEEEECCCEEECCCCCCCCCCCCEEEEECCCCCHHHHHH
DILGGYVSGSFNNSGAVISDDSLKGSSGASNYINRTGDILVYYGTKEDIAILKTLVTSLD
HHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCEEEEECCCCHHHHHHHHHHHHH
TMSDEVVVSGYVFEVQTSQSDGSGILLAAKILSDKFNISVGAAGLDNFINIRTGSIDAIF
CCCCCEEEEEEEEEEEECCCCCCEEEEEEEECCCCCEEEEECCCCCCEEEEECCCHHHHH
NLLKTDSRFTVVSAPRLRVKNNASASFSVGSDVPVLGSVTVNNNTTTQSVEYRSSGVLFN
HHHHCCCCEEEEECCCEEEECCCCEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEE
VTPSIKSRTMDLKIQQQLSNFVTTETGVNNSPTLIKRDVTTEVSLADGDIILLGGLAEQK
ECCCCCCCEEEEEHHHHHHHHEEECCCCCCCCCEEEECCCEEEEECCCCEEEEECCCCCC
DSKASSGWSFFGSRTSESNKTDIMVMLQVRKVDRSRATPRSAARSGELFRDNLN
CCCCCCCCEECCCCCCCCCCCEEEEEEEEEHHHHHCCCCHHHHHCCCHHHCCCC
>Mature Secondary Structure
MKKILLALTLLFSSCAFAGSELELNKVKLPEAISLIYSEVLKVPYMLDPQLVNDERMITF
CHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCEECCEEECCCEEEEE
RLTPDIDEREFVTRYLGNMNIRIWTKKGVDFIAPYTPKEPVKPRYTWTYTPQYRSVAYLS
EECCCCCHHHHHHHHHCCCEEEEEEECCCEEECCCCCCCCCCCCEEEEECCCCCHHHHHH
DILGGYVSGSFNNSGAVISDDSLKGSSGASNYINRTGDILVYYGTKEDIAILKTLVTSLD
HHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCEEEEECCCCHHHHHHHHHHHHH
TMSDEVVVSGYVFEVQTSQSDGSGILLAAKILSDKFNISVGAAGLDNFINIRTGSIDAIF
CCCCCEEEEEEEEEEEECCCCCCEEEEEEEECCCCCEEEEECCCCCCEEEEECCCHHHHH
NLLKTDSRFTVVSAPRLRVKNNASASFSVGSDVPVLGSVTVNNNTTTQSVEYRSSGVLFN
HHHHCCCCEEEEECCCEEEECCCCEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEE
VTPSIKSRTMDLKIQQQLSNFVTTETGVNNSPTLIKRDVTTEVSLADGDIILLGGLAEQK
ECCCCCCCEEEEEHHHHHHHHEEECCCCCCCCCEEEECCCEEEEECCCCEEEEECCCCCC
DSKASSGWSFFGSRTSESNKTDIMVMLQVRKVDRSRATPRSAARSGELFRDNLN
CCCCCCCCEECCCCCCCCCCCEEEEEEEEEHHHHHCCCCHHHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA