| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929371
Identifier: 218929371
GI number: 218929371
Start: 2559765
End: 2560790
Strand: Direct
Name: 218929371
Synonym: YPO2279
Alternate gene names: NA
Gene position: 2559765-2560790 (Clockwise)
Preceding gene: 218929370
Following gene: 218929372
Centisome position: 55.0
GC content: 41.91
Gene sequence:
>1026_bases ATGGCTATTTCTGCATATATTGGCATACCTGGCTCAGGAAAAAGTTATGAAGCCGTTTGCAATGTCATTATTCCGGCATT TACCAGCGGCCGGAGAGTTGTGACGAACATTTATGGTTTACAAAAAGATAAAATCACCGAACGTTATCCTGATGCAACGG GAGAAATTATTGTTGTGGATAATGATGATGTGCTTAAAGCAGATTTCTTTCCTTTTAAAGGTGGGGAAGGGAGCTTTTGC CAGTTTGGTGATTTAATTGTTATTGATGAAGCATGGCGAATCTTCGGTAGCGATAAGGATATGACGGCTGAGAAGAAATC ATTTATTGCTGAACATCGTCATTTTACGCACCCTGAAACGGGTATTAGCTGTGATTTGGTTATTGTAAATCAGTCACTTT CTAATATTGCTCGCTTTCTGAAAGACAAAATAGAAACAACTTACCGGATGCGCAAGCTGAAAGCGTTGGGCCTGAATAAT CATTACTGCATTGACGTATATTCAGGCCACAAAATCTATAAAAGCAACCTCGTCACCAGTTATCGCAATAAATATAACCC TGATATTTTTGAACTTTACAAAAGTTATGAAGGAAATAACGGTAATGAAAAGCAGACAGATAAACGCCAGAGCATCTGGA ATTCTGGCAAAGTCAGGTTCTTTCTTGTGCTTTTTCCATTGATGTTTATCGGGTCAAGCTGGCTGATTTACTCATTTTTC AGCACGTTTGGCCGAAGCGATCCCTCGCCAGATTTGACTACAACAGATGTACGTGATGCGGCCATGTTTCGTTCTTCCGC TGCTACTCCAGCACCAGATACTCCCTCAGAACCAGCTGAACCGCCACTTTCAACTGAGTGGCGTATATCAGGGAGAATGA CCAGTGAAGGCAGGGCGTTTGTGATTCTTGTTAACGGTGCCGGTGTTTTGCGTGCCGTTCCTGCATCCAGTTTTAATTAC AAAGGGATGTTGATGAGCGGAATTATTGATGGTGAGCGTGTGACGCTTTATACGGGGAAAAAATAA
Upstream 100 bases:
>100_bases CTTCATTAACCTGAGTAAATTACCACAGGGGATTAGTATGATTATCTCCGCAATGGCTACTCGTTTTATTATTCGACGTA TTCCTGTTATAGGGTGAGTT
Downstream 100 bases:
>100_bases TGAAAAAGATTTTACTTGCATTAACGCTACTATTTTCTTCATGTGCTTTCGCAGGGTCAGAGCTTGAATTAAATAAAGTC AAGCTACCGGAGGCTATTTC
Product: putative phage-related membrane protein
Products: NA
Alternate protein names: Zonular Occludens xin; Pi Protein; Bacteriophage Protein
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MAISAYIGIPGSGKSYEAVCNVIIPAFTSGRRVVTNIYGLQKDKITERYPDATGEIIVVDNDDVLKADFFPFKGGEGSFC QFGDLIVIDEAWRIFGSDKDMTAEKKSFIAEHRHFTHPETGISCDLVIVNQSLSNIARFLKDKIETTYRMRKLKALGLNN HYCIDVYSGHKIYKSNLVTSYRNKYNPDIFELYKSYEGNNGNEKQTDKRQSIWNSGKVRFFLVLFPLMFIGSSWLIYSFF STFGRSDPSPDLTTTDVRDAAMFRSSAATPAPDTPSEPAEPPLSTEWRISGRMTSEGRAFVILVNGAGVLRAVPASSFNY KGMLMSGIIDGERVTLYTGKK
Sequences:
>Translated_341_residues MAISAYIGIPGSGKSYEAVCNVIIPAFTSGRRVVTNIYGLQKDKITERYPDATGEIIVVDNDDVLKADFFPFKGGEGSFC QFGDLIVIDEAWRIFGSDKDMTAEKKSFIAEHRHFTHPETGISCDLVIVNQSLSNIARFLKDKIETTYRMRKLKALGLNN HYCIDVYSGHKIYKSNLVTSYRNKYNPDIFELYKSYEGNNGNEKQTDKRQSIWNSGKVRFFLVLFPLMFIGSSWLIYSFF STFGRSDPSPDLTTTDVRDAAMFRSSAATPAPDTPSEPAEPPLSTEWRISGRMTSEGRAFVILVNGAGVLRAVPASSFNY KGMLMSGIIDGERVTLYTGKK >Mature_340_residues AISAYIGIPGSGKSYEAVCNVIIPAFTSGRRVVTNIYGLQKDKITERYPDATGEIIVVDNDDVLKADFFPFKGGEGSFCQ FGDLIVIDEAWRIFGSDKDMTAEKKSFIAEHRHFTHPETGISCDLVIVNQSLSNIARFLKDKIETTYRMRKLKALGLNNH YCIDVYSGHKIYKSNLVTSYRNKYNPDIFELYKSYEGNNGNEKQTDKRQSIWNSGKVRFFLVLFPLMFIGSSWLIYSFFS TFGRSDPSPDLTTTDVRDAAMFRSSAATPAPDTPSEPAEPPLSTEWRISGRMTSEGRAFVILVNGAGVLRAVPASSFNYK GMLMSGIIDGERVTLYTGKK
Specific function: Unknown
COG id: COG4128
COG function: function code R; Zonula occludens toxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38139; Mature: 38008
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISAYIGIPGSGKSYEAVCNVIIPAFTSGRRVVTNIYGLQKDKITERYPDATGEIIVVD CEEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEHHHHCCCHHHHHHHCCCCCCCEEEEC NDDVLKADFFPFKGGEGSFCQFGDLIVIDEAWRIFGSDKDMTAEKKSFIAEHRHFTHPET CCCEEEECCCCCCCCCCCCEECCCEEEEECHHHEECCCCCCCHHHHHHHHHHHCCCCCCC GISCDLVIVNQSLSNIARFLKDKIETTYRMRKLKALGLNNHYCIDVYSGHKIYKSNLVTS CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEHHHHHHH YRNKYNPDIFELYKSYEGNNGNEKQTDKRQSIWNSGKVRFFLVLFPLMFIGSSWLIYSFF HHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHCCHHHHHHHH STFGRSDPSPDLTTTDVRDAAMFRSSAATPAPDTPSEPAEPPLSTEWRISGRMTSEGRAF HHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECEEECCCCEE VILVNGAGVLRAVPASSFNYKGMLMSGIIDGERVTLYTGKK EEEEECCCEEEECCCCCCCCCCEEEEEEECCCEEEEEECCC >Mature Secondary Structure AISAYIGIPGSGKSYEAVCNVIIPAFTSGRRVVTNIYGLQKDKITERYPDATGEIIVVD EEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEHHHHCCCHHHHHHHCCCCCCCEEEEC NDDVLKADFFPFKGGEGSFCQFGDLIVIDEAWRIFGSDKDMTAEKKSFIAEHRHFTHPET CCCEEEECCCCCCCCCCCCEECCCEEEEECHHHEECCCCCCCHHHHHHHHHHHCCCCCCC GISCDLVIVNQSLSNIARFLKDKIETTYRMRKLKALGLNNHYCIDVYSGHKIYKSNLVTS CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEHHHHHHH YRNKYNPDIFELYKSYEGNNGNEKQTDKRQSIWNSGKVRFFLVLFPLMFIGSSWLIYSFF HHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHCCHHHHHHHH STFGRSDPSPDLTTTDVRDAAMFRSSAATPAPDTPSEPAEPPLSTEWRISGRMTSEGRAF HHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECEEECCCCEE VILVNGAGVLRAVPASSFNYKGMLMSGIIDGERVTLYTGKK EEEEECCCEEEECCCCCCCCCCEEEEEEECCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA