| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929363
Identifier: 218929363
GI number: 218929363
Start: 2554658
End: 2555065
Strand: Reverse
Name: 218929363
Synonym: YPO2272
Alternate gene names: NA
Gene position: 2555065-2554658 (Counterclockwise)
Preceding gene: 218929364
Following gene: 218929362
Centisome position: 54.9
GC content: 34.56
Gene sequence:
>408_bases ATGAGAAGCGAAAACATCAGAGTCAATGAACTTTATAAGATGCTACGGGATTTTTATATTACCTGCTTTCCGCAAAGAAT CTCAGATAACATTGATATGACGGTGAATTACAAAAGGATGCTTATCGAATATTTAAACGGTGAATTCTTCGATGCTGAAA TAAAAGCGGTCGATGGAATATATAAAATAACCGGTGATATAGTGCAGGTATATAAAGAAAGCAACCCTCCGGAAGGAAGC ACTGCCTATTTAATTGCTAAATTATCAGAAGATGGAGAGTTAAAGAAATTATTGGATAATGGTGTTAAGGATTTAGAGGA CTTTGATTTTTGGCTAAACATGGAAGGCTATGTTGAAAATGGCGTAGCATCTGAAAAGCTCATAACTCAAAAAGAGTGGT TTAATTAA
Upstream 100 bases:
>100_bases GTAAAAGGATTAACAGTCTCAGGAATGAGACAAACGTGCAGTATTACCAACACTGCACGTTCTGGATTGTGCGAATTTTG AACACAGAAGGATAGTAAAA
Downstream 100 bases:
>100_bases TTCATTTAAATCAAGGGGTTAATGATGAACTTAGGTTATCACATTCGTTCTCTACATGAACCATACAAATCAGGCAAAGT TGATGCGGATGCAAAAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MRSENIRVNELYKMLRDFYITCFPQRISDNIDMTVNYKRMLIEYLNGEFFDAEIKAVDGIYKITGDIVQVYKESNPPEGS TAYLIAKLSEDGELKKLLDNGVKDLEDFDFWLNMEGYVENGVASEKLITQKEWFN
Sequences:
>Translated_135_residues MRSENIRVNELYKMLRDFYITCFPQRISDNIDMTVNYKRMLIEYLNGEFFDAEIKAVDGIYKITGDIVQVYKESNPPEGS TAYLIAKLSEDGELKKLLDNGVKDLEDFDFWLNMEGYVENGVASEKLITQKEWFN >Mature_135_residues MRSENIRVNELYKMLRDFYITCFPQRISDNIDMTVNYKRMLIEYLNGEFFDAEIKAVDGIYKITGDIVQVYKESNPPEGS TAYLIAKLSEDGELKKLLDNGVKDLEDFDFWLNMEGYVENGVASEKLITQKEWFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15802; Mature: 15802
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSENIRVNELYKMLRDFYITCFPQRISDNIDMTVNYKRMLIEYLNGEFFDAEIKAVDGI CCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHH YKITGDIVQVYKESNPPEGSTAYLIAKLSEDGELKKLLDNGVKDLEDFDFWLNMEGYVEN HHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHCCHHHHHHHHEEECCCCHHCC GVASEKLITQKEWFN CCCHHHHHHHHHCCC >Mature Secondary Structure MRSENIRVNELYKMLRDFYITCFPQRISDNIDMTVNYKRMLIEYLNGEFFDAEIKAVDGI CCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHH YKITGDIVQVYKESNPPEGSTAYLIAKLSEDGELKKLLDNGVKDLEDFDFWLNMEGYVEN HHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHCCHHHHHHHHEEECCCCHHCC GVASEKLITQKEWFN CCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA