Definition Yersinia pestis CO92 chromosome, complete genome.
Accession NC_003143
Length 4,653,728

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The map label for this gene is tfaD [C]

Identifier: 218929237

GI number: 218929237

Start: 2402645

End: 2403064

Strand: Direct

Name: tfaD [C]

Synonym: YPO2134

Alternate gene names: 218929237

Gene position: 2402645-2403064 (Clockwise)

Preceding gene: 218929236

Following gene: 218929238

Centisome position: 51.63

GC content: 41.43

Gene sequence:

>420_bases
ATGAAAAAGTTAAATAAACTGGATAGCGACGGGTTCTATATTGAAGATTATATCGATGGATATTTGCCAAAGAATTGGAC
AGCTGATTTAGTTGGGGATGGCTATTACAAAGCGCAATATCAAAACGCGGATATAGACCCGGATACAGGGGAATGGACTG
GTGGCGTGTGGGCAGAAACTAGCGGGCCTTCAACTATAGATATTTCAGCTCAAAAAGCGGAATTTGTTACTCAAGCGAAA
CTCAAAAAATCAAAGCTGATAAGTGATGCAAGCGATAGAATAGAGATTCTAAAAGACAGAATTGAGTTGGGGCAAGATAG
AGCAGCAGAGCTGAAATTATGGAAGTCATATCGTATAGCGCTTGATGATATTGATGTAAGTGCGGCACCGGATATCGAGT
GGCCACTAAAGCCTGAGTGA

Upstream 100 bases:

>100_bases
AGAATTGCATTGTGGACGGATGGGGCGTTAAGAATTTACGGAATAACTGGGAATGGTGACATCGGAATAAAATCATCTTG
GGTTATTTGAAGAGGGCATT

Downstream 100 bases:

>100_bases
TTTGGAATATTTGGCAGGGGCGCCGAGGTGGTACGGATTTAGGTTTTGCTGTCGTGCATTGCGGTGAATCGGGACTGGAT
AGATCCGGGCAGGAGAAGGA

Product: putative phage tail fiber assembly protein

Products: NA

Alternate protein names: Tail Assembly Chaperone Gp

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKKLNKLDSDGFYIEDYIDGYLPKNWTADLVGDGYYKAQYQNADIDPDTGEWTGGVWAETSGPSTIDISAQKAEFVTQAK
LKKSKLISDASDRIEILKDRIELGQDRAAELKLWKSYRIALDDIDVSAAPDIEWPLKPE

Sequences:

>Translated_139_residues
MKKLNKLDSDGFYIEDYIDGYLPKNWTADLVGDGYYKAQYQNADIDPDTGEWTGGVWAETSGPSTIDISAQKAEFVTQAK
LKKSKLISDASDRIEILKDRIELGQDRAAELKLWKSYRIALDDIDVSAAPDIEWPLKPE
>Mature_139_residues
MKKLNKLDSDGFYIEDYIDGYLPKNWTADLVGDGYYKAQYQNADIDPDTGEWTGGVWAETSGPSTIDISAQKAEFVTQAK
LKKSKLISDASDRIEILKDRIELGQDRAAELKLWKSYRIALDDIDVSAAPDIEWPLKPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15676; Mature: 15676

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLNKLDSDGFYIEDYIDGYLPKNWTADLVGDGYYKAQYQNADIDPDTGEWTGGVWAET
CCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEC
SGPSTIDISAQKAEFVTQAKLKKSKLISDASDRIEILKDRIELGQDRAAELKLWKSYRIA
CCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHEEEE
LDDIDVSAAPDIEWPLKPE
EECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKLNKLDSDGFYIEDYIDGYLPKNWTADLVGDGYYKAQYQNADIDPDTGEWTGGVWAET
CCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEC
SGPSTIDISAQKAEFVTQAKLKKSKLISDASDRIEILKDRIELGQDRAAELKLWKSYRIA
CCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHEEEE
LDDIDVSAAPDIEWPLKPE
EECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA