| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929232
Identifier: 218929232
GI number: 218929232
Start: 2396307
End: 2396927
Strand: Direct
Name: 218929232
Synonym: YPO2129
Alternate gene names: NA
Gene position: 2396307-2396927 (Clockwise)
Preceding gene: 218929231
Following gene: 218929234
Centisome position: 51.49
GC content: 49.92
Gene sequence:
>621_bases ATGACTTTATTTGCGCAAGAAGTAATGACACCAATCAAACTAAGCGGTTCATTAGCTAAGATGTTCGGTCGCGACCATCA ACGATTAGTTGGTAGCTCTGGCGAAGTTATTAAGGCTTTATGCGTAACTATTCCTGGCTTTGAGCAATACCTGATGACGG CTAAGCAGCGTGGACTCACGTTTGCTGTATTCAAAAATAAGAGAAATGTCGGCAAGGATGAGTTGGAGCTTGCAAGTGGT GGACAAGAAATTCGTATTGTTCCTGTAATTATAGGGAGCAAACGCGGTGGGCTGTTCCAGACCATACTCGGCGTAGCTTT AATCGGTATGGCAACATTTATGAGTGGAGGCTTGGCGGTGGCGTTTGGCGCGGGTGGAGTATGGGGTGGTGCAATGGCAA TGATGGGCGCATCCATGGCCCTTGGCGGCGTTATCCAAATGCTATCACCGCAGCAGAGTGGGTTAGCCATGAGGCAATCA CCAGACAACAAGCCAAGCTATGCATTCGGCGGCCCGGTTAACTCTACGGCTCAGGGTAACCCGGTGGGCGTACTCTACGG CAAGCGTCGAATTGGCGGGGCGGTTATCTCGGCGGGTATTTATGCTGAAGATCAAATGTAA
Upstream 100 bases:
>100_bases TGGAGAATTAATCAGAGAGTTGATGGCATTAAAAAATGCATCTAACAACTATGTAAAACAAATCGAGGTCGCTTAGGCGG CCTTTTTTATTGGAGATAAT
Downstream 100 bases:
>100_bases GAGCGGTTATTTTAATTAACGCCGAAAGGCAGGAGTGAGTTATGACGCAAGAACAACGAATTGAAGCGCTAGAGCAGCAG GTGTCAGACATGCAACAGCA
Product: putative phage tail assembly protein
Products: NA
Alternate protein names: Lambda Tail Assembly I; Bacteriophage Lambda Tail Assembly I; Bacteriophage Lambda Tail Assembly Protein I; Prophage LambdaSo Tail Assembly Protein I; Bacteriophage Protein; Phage-Related Protein Tail Component; Phage Tail Protein; Phage Protein Tail Protein; Prophage; Gp63 Phage Protein; Phage Tail Assembly Protein I; Bacteriophage Tail Protein
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTLFAQEVMTPIKLSGSLAKMFGRDHQRLVGSSGEVIKALCVTIPGFEQYLMTAKQRGLTFAVFKNKRNVGKDELELASG GQEIRIVPVIIGSKRGGLFQTILGVALIGMATFMSGGLAVAFGAGGVWGGAMAMMGASMALGGVIQMLSPQQSGLAMRQS PDNKPSYAFGGPVNSTAQGNPVGVLYGKRRIGGAVISAGIYAEDQM
Sequences:
>Translated_206_residues MTLFAQEVMTPIKLSGSLAKMFGRDHQRLVGSSGEVIKALCVTIPGFEQYLMTAKQRGLTFAVFKNKRNVGKDELELASG GQEIRIVPVIIGSKRGGLFQTILGVALIGMATFMSGGLAVAFGAGGVWGGAMAMMGASMALGGVIQMLSPQQSGLAMRQS PDNKPSYAFGGPVNSTAQGNPVGVLYGKRRIGGAVISAGIYAEDQM >Mature_205_residues TLFAQEVMTPIKLSGSLAKMFGRDHQRLVGSSGEVIKALCVTIPGFEQYLMTAKQRGLTFAVFKNKRNVGKDELELASGG QEIRIVPVIIGSKRGGLFQTILGVALIGMATFMSGGLAVAFGAGGVWGGAMAMMGASMALGGVIQMLSPQQSGLAMRQSP DNKPSYAFGGPVNSTAQGNPVGVLYGKRRIGGAVISAGIYAEDQM
Specific function: Unknown
COG id: COG4723
COG function: function code S; Phage-related protein, tail component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21449; Mature: 21317
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFAQEVMTPIKLSGSLAKMFGRDHQRLVGSSGEVIKALCVTIPGFEQYLMTAKQRGLT CCCCHHHHCCHHHCCCHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCE FAVFKNKRNVGKDELELASGGQEIRIVPVIIGSKRGGLFQTILGVALIGMATFMSGGLAV EEEECCCCCCCHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEE AFGAGGVWGGAMAMMGASMALGGVIQMLSPQQSGLAMRQSPDNKPSYAFGGPVNSTAQGN EECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCEEECCCCCCCCCCC PVGVLYGKRRIGGAVISAGIYAEDQM EEEEEECCCHHCCHHEECCEEECCCC >Mature Secondary Structure TLFAQEVMTPIKLSGSLAKMFGRDHQRLVGSSGEVIKALCVTIPGFEQYLMTAKQRGLT CCCHHHHCCHHHCCCHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCE FAVFKNKRNVGKDELELASGGQEIRIVPVIIGSKRGGLFQTILGVALIGMATFMSGGLAV EEEECCCCCCCHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEE AFGAGGVWGGAMAMMGASMALGGVIQMLSPQQSGLAMRQSPDNKPSYAFGGPVNSTAQGN EECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCEEECCCCCCCCCCC PVGVLYGKRRIGGAVISAGIYAEDQM EEEEEECCCHHCCHHEECCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA