| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218929225
Identifier: 218929225
GI number: 218929225
Start: 2391003
End: 2391755
Strand: Direct
Name: 218929225
Synonym: YPO2122
Alternate gene names: NA
Gene position: 2391003-2391755 (Clockwise)
Preceding gene: 218929224
Following gene: 218929226
Centisome position: 51.38
GC content: 50.6
Gene sequence:
>753_bases ATGACAATTAATACTGACTTGCAACGACTGGAGCCGGGTAACCGCGTTCGCCTGTATGAAGTGGACGGCTCTAAATTTGA TGGCCCGTTATTGCGATTTCACGCTGACACATTACCCCATACCCCAGAAGAAATTGCAGCCGCCAATGGTGATGAATCCA AACTACCAGCCAAGTCTATCTGGTGGCAGGGGGAAGAGTATTCGGCGTGGCCGGTACAGGTTGAAGGTATTGAGATGTCC AGCGATGGACAAAGTGCGCAGCCAAAGTTATCGGTCGCAAACCTTGATGGAACTATCACCGCGCTGTGTCTGGCCTTTGA CGATATGGTGCAGGCTAAAGTTATTGTTCACGACACGTTCAAACATTACCTGGATGCCGTGAACTTCCCCGAAGGCAATT CGGATGCAGACCCAGAACAAGAGAAAGTGCAGGTTTACTATATCGACAGTAAATCGACAGAAACCAATGAGATTGTTGAA TTCACACTTTCCAGCCCAGCAGATTTGCAGGGGCTGCTTATTCCTACCCGGCAAATTCACTCCCTCTGCACCTGGTGCAT GCGCGGAGACTACCGTTCAGGTAATGGCTGCGATTATGCCGGTACGCTGTACTTCGACGAGAAAGGCAATCCGACAGATG ACCCAAGCAAGGATAAATGCTCTGGGCTGTTGGTCGATTGCAAAAAACGATTTGGAGCCGATAACCCATTGCCGTTTGGT GGGTTCCCCGGCGCGGCCCTGATCAAGAGGTAG
Upstream 100 bases:
>100_bases ATCGCGATGCGCCTGTTAGGGCGCGGCTGGTAACAGAGCCTTATAGGCGCATATGAAAAACCTCCGGCTATGCCGGAGGA TATTTATTTATGGGTGAAAT
Downstream 100 bases:
>100_bases AGATGAGAGATAAAACGCTTAAAGCGATATTGGCCCATGCCGAGGCTGAACACCCCAAAGAGTGCTGTGGGGTTGTTGCT CAGAAGTCGCGAGTAGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Minor Tail Protein L; Minor Tail Protein; Phage Protein; Phage Minor Tail Protein; Phage-Related Minor Tail Protein L; Prophage LambdaSo Minor Tail Protein L; Phage Tail Protein; Gifsy-2 Prophage Minor Tail Protein; Phage Tail Component L-Like Protein; Gifsy-1 Prophage VmtL; Phage-Related Protein; Minor Tail Fiber Protein L; Gp65 Phage Protein; Phage-Like Protein; Bacteriophage Tail Protein
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MTINTDLQRLEPGNRVRLYEVDGSKFDGPLLRFHADTLPHTPEEIAAANGDESKLPAKSIWWQGEEYSAWPVQVEGIEMS SDGQSAQPKLSVANLDGTITALCLAFDDMVQAKVIVHDTFKHYLDAVNFPEGNSDADPEQEKVQVYYIDSKSTETNEIVE FTLSSPADLQGLLIPTRQIHSLCTWCMRGDYRSGNGCDYAGTLYFDEKGNPTDDPSKDKCSGLLVDCKKRFGADNPLPFG GFPGAALIKR
Sequences:
>Translated_250_residues MTINTDLQRLEPGNRVRLYEVDGSKFDGPLLRFHADTLPHTPEEIAAANGDESKLPAKSIWWQGEEYSAWPVQVEGIEMS SDGQSAQPKLSVANLDGTITALCLAFDDMVQAKVIVHDTFKHYLDAVNFPEGNSDADPEQEKVQVYYIDSKSTETNEIVE FTLSSPADLQGLLIPTRQIHSLCTWCMRGDYRSGNGCDYAGTLYFDEKGNPTDDPSKDKCSGLLVDCKKRFGADNPLPFG GFPGAALIKR >Mature_249_residues TINTDLQRLEPGNRVRLYEVDGSKFDGPLLRFHADTLPHTPEEIAAANGDESKLPAKSIWWQGEEYSAWPVQVEGIEMSS DGQSAQPKLSVANLDGTITALCLAFDDMVQAKVIVHDTFKHYLDAVNFPEGNSDADPEQEKVQVYYIDSKSTETNEIVEF TLSSPADLQGLLIPTRQIHSLCTWCMRGDYRSGNGCDYAGTLYFDEKGNPTDDPSKDKCSGLLVDCKKRFGADNPLPFGG FPGAALIKR
Specific function: Unknown
COG id: COG4672
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27598; Mature: 27467
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTINTDLQRLEPGNRVRLYEVDGSKFDGPLLRFHADTLPHTPEEIAAANGDESKLPAKSI CCCCCCHHHCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCHHHH WWQGEEYSAWPVQVEGIEMSSDGQSAQPKLSVANLDGTITALCLAFDDMVQAKVIVHDTF EECCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHEEHEEHHHH KHYLDAVNFPEGNSDADPEQEKVQVYYIDSKSTETNEIVEFTLSSPADLQGLLIPTRQIH HHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECHHHHH SLCTWCMRGDYRSGNGCDYAGTLYFDEKGNPTDDPSKDKCSGLLVDCKKRFGADNPLPFG HHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHEEHHHHCCCCCCCCCC GFPGAALIKR CCCCHHHCCC >Mature Secondary Structure TINTDLQRLEPGNRVRLYEVDGSKFDGPLLRFHADTLPHTPEEIAAANGDESKLPAKSI CCCCCHHHCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCHHHH WWQGEEYSAWPVQVEGIEMSSDGQSAQPKLSVANLDGTITALCLAFDDMVQAKVIVHDTF EECCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHEEHEEHHHH KHYLDAVNFPEGNSDADPEQEKVQVYYIDSKSTETNEIVEFTLSSPADLQGLLIPTRQIH HHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECHHHHH SLCTWCMRGDYRSGNGCDYAGTLYFDEKGNPTDDPSKDKCSGLLVDCKKRFGADNPLPFG HHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHEEHHHHCCCCCCCCCC GFPGAALIKR CCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA