| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929138
Identifier: 218929138
GI number: 218929138
Start: 2300331
End: 2301413
Strand: Reverse
Name: 218929138
Synonym: YPO2029
Alternate gene names: NA
Gene position: 2301413-2300331 (Counterclockwise)
Preceding gene: 218929139
Following gene: 218929137
Centisome position: 49.45
GC content: 50.97
Gene sequence:
>1083_bases ATGAAAAAAACACTGATAACGCTAATGAGCGGGCTGTTATTCAGTTCGCTAACACTCGCAGCCCAGACCAGCGACTGGGA CTCTGTGGTTGCGCAGGCAAAAAAAGAAGGCAGCGTGACTTTTAACGTTTGGTATCTACAACCACAGTGGCGCAGTTTTG TGAAAAATTTTGAACAAAAGTACGACATCAAGGTGCGTATTCCAGAAGGCAGCATTGACGGCAATATGAACAAATTGCTG GCAGAGACACGCCGGGAGCAAGGGAAGATCGATGTCATTGCCCTCTCTATCGCACAATTACCGATCACGATGGGCGCGAA ATCACTGGCTAAAGTGGATGATTTACCGGGTTATCAGGATGCGTATCACCAGTTACAGAACGTCGATACCCAAGGTTACG CCGTAGCATTCTGGGGCAACCAGACCGGTTTTGCCTACGATCCCCAACAGATGGGTGATCGACCATTGCCACAGACCATG GAGGAACTCCAACGTTTTATCGACGCCAATCCGAAGCGGTTCGGTTATAACGATCCGAACAACGGGGGGGCGGGGGAAGC CTTTATCCAACGCATCGTCACCACGCTGAGCGGCGACTTTAGCAGCGAGTCTGACACTGTTGACCCAACGGTAATAAAAA ACTGGCAGAAAGGTTGGCAGTGGTTTGCGTCCAATAATAACAATATTACCCGCACGGCGTCCGGTGCCGATAGCCTGACA CGCCTCAACGATGGCGAACTGATGCTGACACCTGACTGGGAAGACCACCTTTCCGGCTTACAAAAGACCGGCGCAATCAC CTCCAGGTTGAAATTCTATGTGCCTGAGTTTGGTATGCCCGGCGGTGGCAATATTGCCAGTATCGCAGCCAACAGCCCGC ACCCGGCGGCCTCCAGAGTGTTCCTAAACTGGCTGATTCAGGCAGATACCCAGAAAGCGCTGAACGAGGCGTTCGGTTCC ACCCCAATGAACAAGCAACTGAATGCTGATGTAAAACAGCCTGACACACCCGTTCAGTTTTACGGTAAGGCGTACAGTAT GCAGATGAAAAAAGAGTTTGCTCGTCAGGTAATGACACGATAA
Upstream 100 bases:
>100_bases ATCCCCAATGTCATTTTGATGATCATCATTGAGAAGCTTTTGAAGGGTAATTATCTGTCACAGTCCACCGGGAAAGCCTG ATTTTACAGGAGATAATCAC
Downstream 100 bases:
>100_bases ATCTGGCGACACAAAAAGGCAGAACGCAGAAGGTTCATGGTTAGGAAATTTGCTGATATTTTTTGTTCTGTTTCCTTGGC GGGTACAGTCGCTGTATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MKKTLITLMSGLLFSSLTLAAQTSDWDSVVAQAKKEGSVTFNVWYLQPQWRSFVKNFEQKYDIKVRIPEGSIDGNMNKLL AETRREQGKIDVIALSIAQLPITMGAKSLAKVDDLPGYQDAYHQLQNVDTQGYAVAFWGNQTGFAYDPQQMGDRPLPQTM EELQRFIDANPKRFGYNDPNNGGAGEAFIQRIVTTLSGDFSSESDTVDPTVIKNWQKGWQWFASNNNNITRTASGADSLT RLNDGELMLTPDWEDHLSGLQKTGAITSRLKFYVPEFGMPGGGNIASIAANSPHPAASRVFLNWLIQADTQKALNEAFGS TPMNKQLNADVKQPDTPVQFYGKAYSMQMKKEFARQVMTR
Sequences:
>Translated_360_residues MKKTLITLMSGLLFSSLTLAAQTSDWDSVVAQAKKEGSVTFNVWYLQPQWRSFVKNFEQKYDIKVRIPEGSIDGNMNKLL AETRREQGKIDVIALSIAQLPITMGAKSLAKVDDLPGYQDAYHQLQNVDTQGYAVAFWGNQTGFAYDPQQMGDRPLPQTM EELQRFIDANPKRFGYNDPNNGGAGEAFIQRIVTTLSGDFSSESDTVDPTVIKNWQKGWQWFASNNNNITRTASGADSLT RLNDGELMLTPDWEDHLSGLQKTGAITSRLKFYVPEFGMPGGGNIASIAANSPHPAASRVFLNWLIQADTQKALNEAFGS TPMNKQLNADVKQPDTPVQFYGKAYSMQMKKEFARQVMTR >Mature_360_residues MKKTLITLMSGLLFSSLTLAAQTSDWDSVVAQAKKEGSVTFNVWYLQPQWRSFVKNFEQKYDIKVRIPEGSIDGNMNKLL AETRREQGKIDVIALSIAQLPITMGAKSLAKVDDLPGYQDAYHQLQNVDTQGYAVAFWGNQTGFAYDPQQMGDRPLPQTM EELQRFIDANPKRFGYNDPNNGGAGEAFIQRIVTTLSGDFSSESDTVDPTVIKNWQKGWQWFASNNNNITRTASGADSLT RLNDGELMLTPDWEDHLSGLQKTGAITSRLKFYVPEFGMPGGGNIASIAANSPHPAASRVFLNWLIQADTQKALNEAFGS TPMNKQLNADVKQPDTPVQFYGKAYSMQMKKEFARQVMTR
Specific function: Unknown
COG id: COG4134
COG function: function code R; ABC-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40130; Mature: 40130
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTLITLMSGLLFSSLTLAAQTSDWDSVVAQAKKEGSVTFNVWYLQPQWRSFVKNFEQK CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHH YDIKVRIPEGSIDGNMNKLLAETRREQGKIDVIALSIAQLPITMGAKSLAKVDDLPGYQD CCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEEHHHCCHHHCHHHHHHHHCCCCHHH AYHQLQNVDTQGYAVAFWGNQTGFAYDPQQMGDRPLPQTMEELQRFIDANPKRFGYNDPN HHHHHHCCCCCCEEEEEECCCCCCEECHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCC NGGAGEAFIQRIVTTLSGDFSSESDTVDPTVIKNWQKGWQWFASNNNNITRTASGADSLT CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCEEEECCCCHHHH RLNDGELMLTPDWEDHLSGLQKTGAITSRLKFYVPEFGMPGGGNIASIAANSPHPAASRV CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHH FLNWLIQADTQKALNEAFGSTPMNKQLNADVKQPDTPVQFYGKAYSMQMKKEFARQVMTR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKTLITLMSGLLFSSLTLAAQTSDWDSVVAQAKKEGSVTFNVWYLQPQWRSFVKNFEQK CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHH YDIKVRIPEGSIDGNMNKLLAETRREQGKIDVIALSIAQLPITMGAKSLAKVDDLPGYQD CCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEEHHHCCHHHCHHHHHHHHCCCCHHH AYHQLQNVDTQGYAVAFWGNQTGFAYDPQQMGDRPLPQTMEELQRFIDANPKRFGYNDPN HHHHHHCCCCCCEEEEEECCCCCCEECHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCC NGGAGEAFIQRIVTTLSGDFSSESDTVDPTVIKNWQKGWQWFASNNNNITRTASGADSLT CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCEEEECCCCHHHH RLNDGELMLTPDWEDHLSGLQKTGAITSRLKFYVPEFGMPGGGNIASIAANSPHPAASRV CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHH FLNWLIQADTQKALNEAFGSTPMNKQLNADVKQPDTPVQFYGKAYSMQMKKEFARQVMTR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA