| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929113
Identifier: 218929113
GI number: 218929113
Start: 2275967
End: 2276674
Strand: Direct
Name: 218929113
Synonym: YPO2003
Alternate gene names: NA
Gene position: 2275967-2276674 (Clockwise)
Preceding gene: 218929112
Following gene: 218929114
Centisome position: 48.91
GC content: 45.06
Gene sequence:
>708_bases TTGTTAATTACGGATGACTCACTTTACCCCTTGGCGAGCGCTATGAATAAATTACGGTTCACTTCACTGACAAAACATCT GATTTTATTTCTGGCGGTTGCTGTCAGCAGTTTGAGTTTGATAGCCGAGGCAGCAGACCGCAATGCCCGACGAGTCCTGA TTGTCTATTTCTCTCAACCTGAGGATGTAAAATTAGAGGGTGTTGATGGTGTCTCGGGTGCGAGCATATTGCAAAAAAAC GGTGAAGTGCTAGGAAGTACCCAGTATGTAGCACAGATTATCCAGGAGGAAACTGGCGGCGATTTATTCCGCATTGAAAC GGTTAAACCCTACCCGCGTCAACATGACCCCTTGCTGAAATATGCAGAGCAAGAAGTGAAAGAGGGAGGGCGACCCGAAA TGAGAGAGAAAATACAAAACCTTGCGGATTATGACCAGATATTTATTGGCTACCCCATCTGGTGGTACAAAATGCCGATG GTGATGTATAGCTTCTTTGAACAGCATGATTTTAGTGGAAAAACCCTTATTCCTTTTACCACTCATGGCGGTAGTCGTTT CTCTGACTCTCTGCGTGAAATCAAACGCCTTCAACCCAACGCACAACTGGTCACTCAAGGCCTTGCTATCTCAAGAAATG ATGTGACGGATGACGATACGCCAAAGGAAATTATCAACTGGTTAAACACATTACCGAACATGCCGTGA
Upstream 100 bases:
>100_bases ATATTGCGGATAGAGAGCGATATTTGTCAGCCATACCTGATGTCACAGTCATTTCTGTGGCATCTGCACGGTACGGTTTA TGGCTTAACAATGAAGAACG
Downstream 100 bases:
>100_bases TGGCAGGCTACTGAATGAAAGCAAAATATATATTTCAGGTTGTACAGGATATGGTGATGATGATTATTCTGTTATCACTG ATGGGGTTTCATCTGTGGGG
Product: flavodoxin
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; Flavodoxin Protein; Exported; Flavodoxin Family Protein; Aldo/Keto Reductase; Carboxymuconolactone Decarboxylase; Lipoprotein
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MLITDDSLYPLASAMNKLRFTSLTKHLILFLAVAVSSLSLIAEAADRNARRVLIVYFSQPEDVKLEGVDGVSGASILQKN GEVLGSTQYVAQIIQEETGGDLFRIETVKPYPRQHDPLLKYAEQEVKEGGRPEMREKIQNLADYDQIFIGYPIWWYKMPM VMYSFFEQHDFSGKTLIPFTTHGGSRFSDSLREIKRLQPNAQLVTQGLAISRNDVTDDDTPKEIINWLNTLPNMP
Sequences:
>Translated_235_residues MLITDDSLYPLASAMNKLRFTSLTKHLILFLAVAVSSLSLIAEAADRNARRVLIVYFSQPEDVKLEGVDGVSGASILQKN GEVLGSTQYVAQIIQEETGGDLFRIETVKPYPRQHDPLLKYAEQEVKEGGRPEMREKIQNLADYDQIFIGYPIWWYKMPM VMYSFFEQHDFSGKTLIPFTTHGGSRFSDSLREIKRLQPNAQLVTQGLAISRNDVTDDDTPKEIINWLNTLPNMP >Mature_235_residues MLITDDSLYPLASAMNKLRFTSLTKHLILFLAVAVSSLSLIAEAADRNARRVLIVYFSQPEDVKLEGVDGVSGASILQKN GEVLGSTQYVAQIIQEETGGDLFRIETVKPYPRQHDPLLKYAEQEVKEGGRPEMREKIQNLADYDQIFIGYPIWWYKMPM VMYSFFEQHDFSGKTLIPFTTHGGSRFSDSLREIKRLQPNAQLVTQGLAISRNDVTDDDTPKEIINWLNTLPNMP
Specific function: Unknown
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26657; Mature: 26657
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLITDDSLYPLASAMNKLRFTSLTKHLILFLAVAVSSLSLIAEAADRNARRVLIVYFSQP CEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC EDVKLEGVDGVSGASILQKNGEVLGSTQYVAQIIQEETGGDLFRIETVKPYPRQHDPLLK CCEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHH YAEQEVKEGGRPEMREKIQNLADYDQIFIGYPIWWYKMPMVMYSFFEQHDFSGKTLIPFT HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEE THGGSRFSDSLREIKRLQPNAQLVTQGLAISRNDVTDDDTPKEIINWLNTLPNMP CCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MLITDDSLYPLASAMNKLRFTSLTKHLILFLAVAVSSLSLIAEAADRNARRVLIVYFSQP CEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC EDVKLEGVDGVSGASILQKNGEVLGSTQYVAQIIQEETGGDLFRIETVKPYPRQHDPLLK CCEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHH YAEQEVKEGGRPEMREKIQNLADYDQIFIGYPIWWYKMPMVMYSFFEQHDFSGKTLIPFT HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEE THGGSRFSDSLREIKRLQPNAQLVTQGLAISRNDVTDDDTPKEIINWLNTLPNMP CCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA