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The map label for this gene is ydfG [C]

Identifier: 218929103

GI number: 218929103

Start: 2265271

End: 2265951

Strand: Reverse

Name: ydfG [C]

Synonym: YPO1993

Alternate gene names: 218929103

Gene position: 2265951-2265271 (Counterclockwise)

Preceding gene: 218929104

Following gene: 218929102

Centisome position: 48.69

GC content: 40.38

Gene sequence:

>681_bases
ATGTCCTGTAATTTTAAAATAATACTCACCGGTGCGTCAGGATTAATTGGTTCTGCCATTGCTGATGCACTGTATAAATC
AGGTATGAATCTTGTTCTTGCTTGTAAACGTTCCCAAAAATTACAAGACAGATATCTTAGCGATGATAAGTCAAAAAGAG
CTTATTTTTGGTATGGCGATCTTACCAACGAAAAAGCCTGTCGTGAATTAGTGGAGTATGCTGTTCAGCAAATGGGGGGG
GTGGATGTATTGATCAATTGTGCCGGCGTCTTTAATTTTTCTGCTCTCGAAGAGATGACCTATAGTAGAATTACCGATAC
CATCAGTACCAACCTTCTCGCCCCTATTTATCTTACACATCTTGTATTACCTTATATTAAGACCAGTGCCTGCCCAATAA
TCGTGAATATATCCTCAATTGCTGGCTTCTCCAGTTTGCCTGAAGGCGCGTGCTACGCAGCATCTAAATGGGGGCTTAAT
GGCTTTATCCACAGCATCCGCGAAGAATTACGCAAAAAATCAATTCACATCTGTAATATATCGCCTTGTCAGGTTAAAAC
ACTGTCCCATCATTCTGATACGGCAATCAGAACCATAGCACCGGAAAATATCGCTAATGCGGTTATTTTAGTTTTGTCAT
ATGTACAAAAAACGTCGTCTTCAATTGACGTAGTGCTGTAG

Upstream 100 bases:

>100_bases
TTGTTCCAATAATCTTCACATAACTTAGTGACTCAAGCCGGGAGTGGCGGTCTTCTCACACCCGGCTTTTATCTAATAGC
CAAAAATGAATTGAGGAAGT

Downstream 100 bases:

>100_bases
CCATTTCCCATGAAATCCATATGGTTATGTGTTTTTTCTATTTGATCTCTACCCCATAGGTTGATTTAATAAGCACCGTA
ACGAAATAATAACGGAATAT

Product: putative dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSCNFKIILTGASGLIGSAIADALYKSGMNLVLACKRSQKLQDRYLSDDKSKRAYFWYGDLTNEKACRELVEYAVQQMGG
VDVLINCAGVFNFSALEEMTYSRITDTISTNLLAPIYLTHLVLPYIKTSACPIIVNISSIAGFSSLPEGACYAASKWGLN
GFIHSIREELRKKSIHICNISPCQVKTLSHHSDTAIRTIAPENIANAVILVLSYVQKTSSSIDVVL

Sequences:

>Translated_226_residues
MSCNFKIILTGASGLIGSAIADALYKSGMNLVLACKRSQKLQDRYLSDDKSKRAYFWYGDLTNEKACRELVEYAVQQMGG
VDVLINCAGVFNFSALEEMTYSRITDTISTNLLAPIYLTHLVLPYIKTSACPIIVNISSIAGFSSLPEGACYAASKWGLN
GFIHSIREELRKKSIHICNISPCQVKTLSHHSDTAIRTIAPENIANAVILVLSYVQKTSSSIDVVL
>Mature_225_residues
SCNFKIILTGASGLIGSAIADALYKSGMNLVLACKRSQKLQDRYLSDDKSKRAYFWYGDLTNEKACRELVEYAVQQMGGV
DVLINCAGVFNFSALEEMTYSRITDTISTNLLAPIYLTHLVLPYIKTSACPIIVNISSIAGFSSLPEGACYAASKWGLNG
FIHSIREELRKKSIHICNISPCQVKTLSHHSDTAIRTIAPENIANAVILVLSYVQKTSSSIDVVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=192, Percent_Identity=29.6875, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI7706318, Length=187, Percent_Identity=31.5508021390374, Blast_Score=74, Evalue=7e-14,
Organism=Homo sapiens, GI109715829, Length=229, Percent_Identity=30.5676855895196, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI32455239, Length=198, Percent_Identity=29.7979797979798, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI5031765, Length=198, Percent_Identity=29.7979797979798, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI4503817, Length=203, Percent_Identity=25.615763546798, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI22507405, Length=187, Percent_Identity=31.0160427807487, Blast_Score=65, Evalue=3e-11,
Organism=Escherichia coli, GI1787820, Length=180, Percent_Identity=25, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789378, Length=188, Percent_Identity=25, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787335, Length=226, Percent_Identity=28.3185840707965, Blast_Score=65, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17570069, Length=188, Percent_Identity=30.8510638297872, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71997402, Length=189, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562904, Length=194, Percent_Identity=29.8969072164948, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI25147288, Length=182, Percent_Identity=29.1208791208791, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71982365, Length=186, Percent_Identity=28.494623655914, Blast_Score=67, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6323882, Length=188, Percent_Identity=30.8510638297872, Blast_Score=91, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6322861, Length=233, Percent_Identity=26.1802575107296, Blast_Score=70, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6322795, Length=119, Percent_Identity=34.453781512605, Blast_Score=62, Evalue=6e-11,
Organism=Drosophila melanogaster, GI23397609, Length=191, Percent_Identity=30.3664921465969, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI116007236, Length=219, Percent_Identity=27.3972602739726, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24641232, Length=213, Percent_Identity=26.7605633802817, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21357041, Length=184, Percent_Identity=29.3478260869565, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24644339, Length=179, Percent_Identity=30.1675977653631, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI21358495, Length=187, Percent_Identity=27.2727272727273, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI28571526, Length=189, Percent_Identity=29.1005291005291, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24663911, Length=231, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24649181, Length=185, Percent_Identity=29.1891891891892, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28571387, Length=225, Percent_Identity=27.5555555555556, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24643142, Length=181, Percent_Identity=28.7292817679558, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI281364494, Length=222, Percent_Identity=27.027027027027, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI116007238, Length=214, Percent_Identity=24.7663551401869, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 24751; Mature: 24620

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCNFKIILTGASGLIGSAIADALYKSGMNLVLACKRSQKLQDRYLSDDKSKRAYFWYGD
CCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCCEEEEEECC
LTNEKACRELVEYAVQQMGGVDVLINCAGVFNFSALEEMTYSRITDTISTNLLAPIYLTH
CCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLPYIKTSACPIIVNISSIAGFSSLPEGACYAASKWGLNGFIHSIREELRKKSIHICNI
HHHHHHHCCCCEEEEEEHHHCCCCCCCCCCEEHHHHCCHHHHHHHHHHHHHHCCEEEECC
SPCQVKTLSHHSDTAIRTIAPENIANAVILVLSYVQKTSSSIDVVL
CCCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEC
>Mature Secondary Structure 
SCNFKIILTGASGLIGSAIADALYKSGMNLVLACKRSQKLQDRYLSDDKSKRAYFWYGD
CCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCCEEEEEECC
LTNEKACRELVEYAVQQMGGVDVLINCAGVFNFSALEEMTYSRITDTISTNLLAPIYLTH
CCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLPYIKTSACPIIVNISSIAGFSSLPEGACYAASKWGLNGFIHSIREELRKKSIHICNI
HHHHHHHCCCCEEEEEEHHHCCCCCCCCCCEEHHHHCCHHHHHHHHHHHHHHCCEEEECC
SPCQVKTLSHHSDTAIRTIAPENIANAVILVLSYVQKTSSSIDVVL
CCCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA