| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929090
Identifier: 218929090
GI number: 218929090
Start: 2248632
End: 2249438
Strand: Direct
Name: 218929090
Synonym: YPO1980
Alternate gene names: NA
Gene position: 2248632-2249438 (Clockwise)
Preceding gene: 218929089
Following gene: 218929091
Centisome position: 48.32
GC content: 53.66
Gene sequence:
>807_bases ATGGCTAAGATCACTACGTTTGAAGTGGGCTATTGCACACACCTTGCCTGCATGGCGCTTAAAGGCGCCCCTTTTCGTGT TTGCAAGTTCCCGGCACGCGCCTGTTTGATTGAGGTAGACGGCCACCGCTGGCTGTGGGATACCGGCTATGCAACTTGGT TTGAGCAGTACACGCAGTCAGGGGTTTTTCGCCTCTACCGGCAAGTGACGCCAGTCTATTTCGATCCCGCGCAGTCTCTG GTGACACAACTGCGCGAACAAGGCTATGTTAATCGGGATATCCACGGGCTGATCTTGTCTCACTTTCATGCCGACCATAT TGCCGGGCTGCGTGATTTTAGCGACCTTACTTTTATTTGCTCTGGTGACGGTTGGCATAAAACCCGCGAATTGCGTGGCG TTGCAGCCCTACGGCAGGCGTTTATTCCTGGCCTGATACCGGAGAGTTTTGAATCCTCCCTCCAGTTTATCGAGAGTTTC CCACAGCAGATGCTACCGTCTGAACTTGCCCCCTTTGAGAGCGGTTTCGCCTTGCCCGGCAGCAAAGGGCAGGTCATTCT GGTGCCGCTACCGGGCCATGCGGTGGGGCATATTGGGGCATTTATTCTTACGGATAATGGCTGGGTCTTGCTGGCAAGTG ACGCGGCCTGGTCACCGTTAAGTTACCAACAACTGCGTGGGCCATCACGTATCGCGAACTTATTGATGGCAGACTCGCGT GCTTACTACCAAACGTTACAGCGGCTTAATCACTTATGGCGCACGGGGAAAACAGACATTCGGTTATGCCATGAGGGGGA TTTATGA
Upstream 100 bases:
>100_bases GAACGTGCCATTAATGAACTGGGTTACCGGCCTCGTTACTCGATGGCGGAGGGGATTGTGCTGGCTGGCGAGTGGCTTAG CGCGCAGAGGAGTGGCCAGC
Downstream 100 bases:
>100_bases TCCCGTTTATGACGCTCTGGCACTATTTTCGTATCCGACGCCTGCACTTTGCCAACCGTAAAACGCTTGAAGCTTATCAG GTCAAAAAACTTCAGCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein; GumP Protein; Metal Dependent Hydrolase; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Metallo-Beta-Lactamase Protein
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MAKITTFEVGYCTHLACMALKGAPFRVCKFPARACLIEVDGHRWLWDTGYATWFEQYTQSGVFRLYRQVTPVYFDPAQSL VTQLREQGYVNRDIHGLILSHFHADHIAGLRDFSDLTFICSGDGWHKTRELRGVAALRQAFIPGLIPESFESSLQFIESF PQQMLPSELAPFESGFALPGSKGQVILVPLPGHAVGHIGAFILTDNGWVLLASDAAWSPLSYQQLRGPSRIANLLMADSR AYYQTLQRLNHLWRTGKTDIRLCHEGDL
Sequences:
>Translated_268_residues MAKITTFEVGYCTHLACMALKGAPFRVCKFPARACLIEVDGHRWLWDTGYATWFEQYTQSGVFRLYRQVTPVYFDPAQSL VTQLREQGYVNRDIHGLILSHFHADHIAGLRDFSDLTFICSGDGWHKTRELRGVAALRQAFIPGLIPESFESSLQFIESF PQQMLPSELAPFESGFALPGSKGQVILVPLPGHAVGHIGAFILTDNGWVLLASDAAWSPLSYQQLRGPSRIANLLMADSR AYYQTLQRLNHLWRTGKTDIRLCHEGDL >Mature_267_residues AKITTFEVGYCTHLACMALKGAPFRVCKFPARACLIEVDGHRWLWDTGYATWFEQYTQSGVFRLYRQVTPVYFDPAQSLV TQLREQGYVNRDIHGLILSHFHADHIAGLRDFSDLTFICSGDGWHKTRELRGVAALRQAFIPGLIPESFESSLQFIESFP QQMLPSELAPFESGFALPGSKGQVILVPLPGHAVGHIGAFILTDNGWVLLASDAAWSPLSYQQLRGPSRIANLLMADSRA YYQTLQRLNHLWRTGKTDIRLCHEGDL
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30156; Mature: 30025
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKITTFEVGYCTHLACMALKGAPFRVCKFPARACLIEVDGHRWLWDTGYATWFEQYTQS CCEEEEEECHHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCCEEEEECCHHHHHHHHHHH GVFRLYRQVTPVYFDPAQSLVTQLREQGYVNRDIHGLILSHFHADHIAGLRDFSDLTFIC HHHHHHHHCCCCEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE SGDGWHKTRELRGVAALRQAFIPGLIPESFESSLQFIESFPQQMLPSELAPFESGFALPG CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCC SKGQVILVPLPGHAVGHIGAFILTDNGWVLLASDAAWSPLSYQQLRGPSRIANLLMADSR CCCCEEEEECCCCHHHHCEEEEEECCCEEEEECCCCCCCCCHHHHCCHHHHHHHHHHCCH AYYQTLQRLNHLWRTGKTDIRLCHEGDL HHHHHHHHHHHHHHCCCCCEEEEECCCC >Mature Secondary Structure AKITTFEVGYCTHLACMALKGAPFRVCKFPARACLIEVDGHRWLWDTGYATWFEQYTQS CEEEEEECHHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCCEEEEECCHHHHHHHHHHH GVFRLYRQVTPVYFDPAQSLVTQLREQGYVNRDIHGLILSHFHADHIAGLRDFSDLTFIC HHHHHHHHCCCCEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE SGDGWHKTRELRGVAALRQAFIPGLIPESFESSLQFIESFPQQMLPSELAPFESGFALPG CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCC SKGQVILVPLPGHAVGHIGAFILTDNGWVLLASDAAWSPLSYQQLRGPSRIANLLMADSR CCCCEEEEECCCCHHHHCEEEEEECCCEEEEECCCCCCCCCHHHHCCHHHHHHHHHHCCH AYYQTLQRLNHLWRTGKTDIRLCHEGDL HHHHHHHHHHHHHHCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA