| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929047
Identifier: 218929047
GI number: 218929047
Start: 2189870
End: 2190739
Strand: Reverse
Name: 218929047
Synonym: YPO1933
Alternate gene names: NA
Gene position: 2190739-2189870 (Counterclockwise)
Preceding gene: 218929049
Following gene: 218929046
Centisome position: 47.07
GC content: 50.11
Gene sequence:
>870_bases ATGAAAAACTCTTCTGCTAACTGCCCAGTCCCATTCGATATTATGGAACCTTCGATTTTTGCGCTACCCGAAGATGCATG TGATAGCCACGCACACGTTATCTCCCCTCGCGCTATCTACCCCATGGTGGCGGAACGCAGTTATACCCCGCCACCAGCAC CTGAAGAGAAATACCTATCCATGCTTGCAGCAACAGGTATGAGCCGAGGTGTCTTGGTACAGATCAGCGTTTATGGTTCA GATAACCGTTACATGCTTCAGGTACTGAAACGGCATCCGGAATATTTACGCGGTGTGGCAGTAGTGACGGAAGATGTCAC CGACCAAGAATTGCAAGACATGGCATTGGCCGGTGTTAGAGGGCTACGCATCAACGTGCTGTTCGGGGGAGGAATCGGTT TCGATGCCATGGAAAATTTAGCATCAAAAATAGCGCCCCTGGGCTGGCACATGCAGTTCCTGATGGATGTACGACAGCTT CCGGCACTGATACCACGAATGAAAAAACTGCCTTGTCCGTGCGTCATCGACCACATGGGACATATGCCTGTGTCATTGGG ACTCAATCACCCAGGCTATCAGACATTGTTGCATATGGTCAGAGAATATGGATGGTGGGTAAAATTATCAGGAGCCTATC GTATCAGTGAATCATGGCAAGACGGCTATCTCGATGTCGTGCCTTTTGCACAAAAGCTTATCGAAACCGCACCTGACCGC ATGGTCTGGGGAAGCGACTGGCCACATGTCTCGGTATCTCGAATGCCAGATACTGGAGGATTACGCAATTTGCTCGCCGC TTGGGTACCCGATGAGCAGGTGCGCAACCGGATCTTGGTCGATAACCCTGCTCGTCTATATGATTTTTAA
Upstream 100 bases:
>100_bases GGTTTGTTCTATTTTTGTCAATTAATTTATATCAAAACATTCGCTTTCTATATCAATAATTGCCTTCTAATCTGAATTTT ATTTTTACCTGTGTTTAACA
Downstream 100 bases:
>100_bases AAATAACAAAATAACTTGTGAGGTGCTCACAAGAGTTAAAAAGCCAGTCTGTAAAGGAGATATTTATGCGTTGGTTTAGC GATCTCAACCAGACAGAAAG
Product: putative dicarboxylic acid hydrolase
Products: NA
Alternate protein names: 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Amidohydrolase; Dicarboxylic Acid Hydrolase; Metal-Dependent Hydrolase; Amidohydrolase Family Protein; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; (2-Pyrone-4 6-)Dicarboxylic Acid Hydrolase; Amidase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase 2 Family; Amidohydrolase Family; Aminohydrolase; PDC Hydrolase-Like Protein; Metal-Dependent Transmembrane Hydrolase; Metal-Dependent Hydrolase Protein; Exported Protein
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MKNSSANCPVPFDIMEPSIFALPEDACDSHAHVISPRAIYPMVAERSYTPPPAPEEKYLSMLAATGMSRGVLVQISVYGS DNRYMLQVLKRHPEYLRGVAVVTEDVTDQELQDMALAGVRGLRINVLFGGGIGFDAMENLASKIAPLGWHMQFLMDVRQL PALIPRMKKLPCPCVIDHMGHMPVSLGLNHPGYQTLLHMVREYGWWVKLSGAYRISESWQDGYLDVVPFAQKLIETAPDR MVWGSDWPHVSVSRMPDTGGLRNLLAAWVPDEQVRNRILVDNPARLYDF
Sequences:
>Translated_289_residues MKNSSANCPVPFDIMEPSIFALPEDACDSHAHVISPRAIYPMVAERSYTPPPAPEEKYLSMLAATGMSRGVLVQISVYGS DNRYMLQVLKRHPEYLRGVAVVTEDVTDQELQDMALAGVRGLRINVLFGGGIGFDAMENLASKIAPLGWHMQFLMDVRQL PALIPRMKKLPCPCVIDHMGHMPVSLGLNHPGYQTLLHMVREYGWWVKLSGAYRISESWQDGYLDVVPFAQKLIETAPDR MVWGSDWPHVSVSRMPDTGGLRNLLAAWVPDEQVRNRILVDNPARLYDF >Mature_289_residues MKNSSANCPVPFDIMEPSIFALPEDACDSHAHVISPRAIYPMVAERSYTPPPAPEEKYLSMLAATGMSRGVLVQISVYGS DNRYMLQVLKRHPEYLRGVAVVTEDVTDQELQDMALAGVRGLRINVLFGGGIGFDAMENLASKIAPLGWHMQFLMDVRQL PALIPRMKKLPCPCVIDHMGHMPVSLGLNHPGYQTLLHMVREYGWWVKLSGAYRISESWQDGYLDVVPFAQKLIETAPDR MVWGSDWPHVSVSRMPDTGGLRNLLAAWVPDEQVRNRILVDNPARLYDF
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32429; Mature: 32429
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSSANCPVPFDIMEPSIFALPEDACDSHAHVISPRAIYPMVAERSYTPPPAPEEKYLS CCCCCCCCCCCHHCCCCCEEECCCHHCCCCCEEECCHHHHHHHHCCCCCCCCCCHHHHHH MLAATGMSRGVLVQISVYGSDNRYMLQVLKRHPEYLRGVAVVTEDVTDQELQDMALAGVR HHHHCCCCCCEEEEEEEECCCCHHHHHHHHHCHHHHHHHHHEECCCCHHHHHHHHHHCCC GLRINVLFGGGIGFDAMENLASKIAPLGWHMQFLMDVRQLPALIPRMKKLPCPCVIDHMG CEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC HMPVSLGLNHPGYQTLLHMVREYGWWVKLSGAYRISESWQDGYLDVVPFAQKLIETAPDR CCCEEECCCCCCHHHHHHHHHHCCCEEEECCEEEECCCCCCCCCHHHHHHHHHHHCCCCC MVWGSDWPHVSVSRMPDTGGLRNLLAAWVPDEQVRNRILVDNPARLYDF EECCCCCCCEEEECCCCCCCHHHHHHHCCCCHHHCCEEEECCCHHHCCC >Mature Secondary Structure MKNSSANCPVPFDIMEPSIFALPEDACDSHAHVISPRAIYPMVAERSYTPPPAPEEKYLS CCCCCCCCCCCHHCCCCCEEECCCHHCCCCCEEECCHHHHHHHHCCCCCCCCCCHHHHHH MLAATGMSRGVLVQISVYGSDNRYMLQVLKRHPEYLRGVAVVTEDVTDQELQDMALAGVR HHHHCCCCCCEEEEEEEECCCCHHHHHHHHHCHHHHHHHHHEECCCCHHHHHHHHHHCCC GLRINVLFGGGIGFDAMENLASKIAPLGWHMQFLMDVRQLPALIPRMKKLPCPCVIDHMG CEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC HMPVSLGLNHPGYQTLLHMVREYGWWVKLSGAYRISESWQDGYLDVVPFAQKLIETAPDR CCCEEECCCCCCHHHHHHHHHHCCCEEEECCEEEECCCCCCCCCHHHHHHHHHHHCCCCC MVWGSDWPHVSVSRMPDTGGLRNLLAAWVPDEQVRNRILVDNPARLYDF EECCCCCCCEEEECCCCCCCHHHHHHHCCCCHHHCCEEEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA