| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929021
Identifier: 218929021
GI number: 218929021
Start: 2139602
End: 2139967
Strand: Reverse
Name: 218929021
Synonym: YPO1905a
Alternate gene names: NA
Gene position: 2139967-2139602 (Counterclockwise)
Preceding gene: 218929022
Following gene: 218929020
Centisome position: 45.98
GC content: 36.89
Gene sequence:
>366_bases ATGTCAAAAAAATATCAGCCATTGCTTATAACTCATTATATGTCAACATGGGTCACTATAACGGAAGCAGTTGAGATCAC TACCAAAGCCATAAAACAAAAAATTACTCCTAGCGATATTTATCGTCATGCCTTGAGTGGCAACATCCTACTATCGGTCT ATTTCCAGTCTCCTGTGATACTTAAGAAGATACAAACTTTTAATGGAAAAATAAAATTCAGGCAGTTTGAGGGAGACCTA CTTGATAAACTATGCATGCTTGACAGGGACGGTTTTATTTATGGTCAAAATTTAAGACTCTGTACAGAAGCCAGATATGT TTGTCCTGTGCAACAAATTATAGATACCCCCCCTGATAGGCTATGA
Upstream 100 bases:
>100_bases TTTCTCTGTCATAAACCCTCTGATTAATCATAAATAAATACTTGTGACACCAATCTTTTTCCTTAACGGAACGAATTGTT GTGTAGAAGGAGATAATATT
Downstream 100 bases:
>100_bases ATATGTTTTGATTCAGCGCATACTGGCACGTGAACTTAAATTCCCCTCCCCAATTGTGGGGGCAAGAAAAACTAACCATG GTATTATAGTAAGATTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSKKYQPLLITHYMSTWVTITEAVEITTKAIKQKITPSDIYRHALSGNILLSVYFQSPVILKKIQTFNGKIKFRQFEGDL LDKLCMLDRDGFIYGQNLRLCTEARYVCPVQQIIDTPPDRL
Sequences:
>Translated_121_residues MSKKYQPLLITHYMSTWVTITEAVEITTKAIKQKITPSDIYRHALSGNILLSVYFQSPVILKKIQTFNGKIKFRQFEGDL LDKLCMLDRDGFIYGQNLRLCTEARYVCPVQQIIDTPPDRL >Mature_120_residues SKKYQPLLITHYMSTWVTITEAVEITTKAIKQKITPSDIYRHALSGNILLSVYFQSPVILKKIQTFNGKIKFRQFEGDLL DKLCMLDRDGFIYGQNLRLCTEARYVCPVQQIIDTPPDRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14028; Mature: 13896
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKYQPLLITHYMSTWVTITEAVEITTKAIKQKITPSDIYRHALSGNILLSVYFQSPVI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCHH LKKIQTFNGKIKFRQFEGDLLDKLCMLDRDGFIYGQNLRLCTEARYVCPVQQIIDTPPDR HHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEECCCEEECCCCCCCCHHHHHCCCCCC L C >Mature Secondary Structure SKKYQPLLITHYMSTWVTITEAVEITTKAIKQKITPSDIYRHALSGNILLSVYFQSPVI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCHH LKKIQTFNGKIKFRQFEGDLLDKLCMLDRDGFIYGQNLRLCTEARYVCPVQQIIDTPPDR HHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEECCCEEECCCCCCCCHHHHHCCCCCC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA