| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is yebZ [H]
Identifier: 218928907
GI number: 218928907
Start: 2031257
End: 2032141
Strand: Direct
Name: yebZ [H]
Synonym: YPO1785
Alternate gene names: 218928907
Gene position: 2031257-2032141 (Clockwise)
Preceding gene: 218928906
Following gene: 218928908
Centisome position: 43.65
GC content: 49.15
Gene sequence:
>885_bases ATGTCTTTGGCGACTCTATTCATTCTGTGTCGCTTTCTGCACTTTATGGCAGTGATGCTGATGTTTGGCATCACTGTATT CACCGCCTTTTTGGCACCAGATCGTTTCTCTTTGATACTAAAAAAACGCCTGTCACCGTTACTTGTCTCTAGTACGCTGC TAGGGTTGATTTCTGCCGTGGGAATCTTGGCTATTCAGGCTGGAATGATGGGGGATGGCTGGGCAGACACCTACCGACTG ACTGTCTGGTGGGCCGTCTTAGGGACGCGATTTGGTCAGGTATGGCAATGGCACATTGGCTTGTCCATCTTGAGTATGTG GATCGTGTTGTTGGGTAGCGCGCGAAGGTATTACTGGCTGATGGTCGGCTGCTCTACATTGTTGCTCGCGAGCCTGGCTT TTGCGGGGCATGCAGCGATGTATGATGGGGTACTTGGATGGGTTCACCAAACTAACCAAGTCATCCACCTGCTCAGTGCG GGGTACTGGCTGGGATGTTTACCGCCGTTGCTTATTTGCCTTGCATACACTCGTGATAAGGGTGCCAAACGTGAAGCGAT CACGACATTAATTCGATTTTCGAGCTGGGGGCACTTGGCCGTTGCCCTCGTGTTGGTCACTGGGGTAATAAATAGCCTTA TTATGCTGCAAGATGCCACGCTGACGCTGACATCAAATTATCAGATGCTCTTACTAGGCAAAGTCATATTGGTGGTATTT ATGCTTGCTGTTGCGCTGATTAACCGTTACCGCATTGTTCCGATGCTCAAGCAACTGCCCACGAAAGCACATCATTGGTT AGTTATTAATAGCTGTTTTGAAATCGTGCTTGGCGTGGCAGTGCTATTGCTGGTCAGTATTTTTGCCACAATGGCGCCAG TATAG
Upstream 100 bases:
>100_bases GCCATGCTTTAGCTGCTGGAAAATATCATGTCTCATGGCACGTTGTCTCGGTTGATGGCCATAAGACGAAAGGCACTTAC AGCTTCACTGTGAAATAGAT
Downstream 100 bases:
>100_bases TGGGCAAGAATAAATGCCAGTTATTGCCGGTGAGCTTGCATCAACTCCGCGGTATGCGAGAAAATCAAAACAATTGGCTA ATTGAGGGTAATTAAGATGA
Product: putative copper resistance protein D
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSLATLFILCRFLHFMAVMLMFGITVFTAFLAPDRFSLILKKRLSPLLVSSTLLGLISAVGILAIQAGMMGDGWADTYRL TVWWAVLGTRFGQVWQWHIGLSILSMWIVLLGSARRYYWLMVGCSTLLLASLAFAGHAAMYDGVLGWVHQTNQVIHLLSA GYWLGCLPPLLICLAYTRDKGAKREAITTLIRFSSWGHLAVALVLVTGVINSLIMLQDATLTLTSNYQMLLLGKVILVVF MLAVALINRYRIVPMLKQLPTKAHHWLVINSCFEIVLGVAVLLLVSIFATMAPV
Sequences:
>Translated_294_residues MSLATLFILCRFLHFMAVMLMFGITVFTAFLAPDRFSLILKKRLSPLLVSSTLLGLISAVGILAIQAGMMGDGWADTYRL TVWWAVLGTRFGQVWQWHIGLSILSMWIVLLGSARRYYWLMVGCSTLLLASLAFAGHAAMYDGVLGWVHQTNQVIHLLSA GYWLGCLPPLLICLAYTRDKGAKREAITTLIRFSSWGHLAVALVLVTGVINSLIMLQDATLTLTSNYQMLLLGKVILVVF MLAVALINRYRIVPMLKQLPTKAHHWLVINSCFEIVLGVAVLLLVSIFATMAPV >Mature_293_residues SLATLFILCRFLHFMAVMLMFGITVFTAFLAPDRFSLILKKRLSPLLVSSTLLGLISAVGILAIQAGMMGDGWADTYRLT VWWAVLGTRFGQVWQWHIGLSILSMWIVLLGSARRYYWLMVGCSTLLLASLAFAGHAAMYDGVLGWVHQTNQVIHLLSAG YWLGCLPPLLICLAYTRDKGAKREAITTLIRFSSWGHLAVALVLVTGVINSLIMLQDATLTLTSNYQMLLLGKVILVVFM LAVALINRYRIVPMLKQLPTKAHHWLVINSCFEIVLGVAVLLLVSIFATMAPV
Specific function: Unknown
COG id: COG1276
COG function: function code P; Putative copper export protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CopD family [H]
Homologues:
Organism=Escherichia coli, GI1788145, Length=291, Percent_Identity=39.8625429553265, Blast_Score=189, Evalue=1e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008457 [H]
Pfam domain/function: PF05425 CopD [H]
EC number: NA
Molecular weight: Translated: 32583; Mature: 32452
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLATLFILCRFLHFMAVMLMFGITVFTAFLAPDRFSLILKKRLSPLLVSSTLLGLISAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GILAIQAGMMGDGWADTYRLTVWWAVLGTRFGQVWQWHIGLSILSMWIVLLGSARRYYWL HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH MVGCSTLLLASLAFAGHAAMYDGVLGWVHQTNQVIHLLSAGYWLGCLPPLLICLAYTRDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC GAKREAITTLIRFSSWGHLAVALVLVTGVINSLIMLQDATLTLTSNYQMLLLGKVILVVF CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH MLAVALINRYRIVPMLKQLPTKAHHWLVINSCFEIVLGVAVLLLVSIFATMAPV HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLATLFILCRFLHFMAVMLMFGITVFTAFLAPDRFSLILKKRLSPLLVSSTLLGLISAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GILAIQAGMMGDGWADTYRLTVWWAVLGTRFGQVWQWHIGLSILSMWIVLLGSARRYYWL HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH MVGCSTLLLASLAFAGHAAMYDGVLGWVHQTNQVIHLLSAGYWLGCLPPLLICLAYTRDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC GAKREAITTLIRFSSWGHLAVALVLVTGVINSLIMLQDATLTLTSNYQMLLLGKVILVVF CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH MLAVALINRYRIVPMLKQLPTKAHHWLVINSCFEIVLGVAVLLLVSIFATMAPV HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]