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The map label for this gene is F17a-A [H]

Identifier: 218928835

GI number: 218928835

Start: 1948363

End: 1948905

Strand: Direct

Name: F17a-A [H]

Synonym: YPO1707

Alternate gene names: 218928835

Gene position: 1948363-1948905 (Clockwise)

Preceding gene: 218928834

Following gene: 218928836

Centisome position: 41.87

GC content: 42.54

Gene sequence:

>543_bases
GTGAAAATTAAATCAAGCAATGTGTTAATTGCAGCTTTCGCTGGCTTATTTATTGCCCAATCAGCATTTGCAGCCGATGG
TACTATTACTATTAACGGTAAAATTACTGACACGACGTGTGGTATCTCTGTTAATAATGGCACTAAAGATGGCACCGTCA
CATTGCCAGTTGTCTCTGCAAGCGCATTAGACGGCATTAATTCTGTAGCGGGTACCACACCTTTCAATATCGTATTAACC
GGTTGTACTGGGGCGACAATGGGTAATGCCTATGCTCATTTTGAACAGGGTACTACCGTAGAAGCGTCTACTGGTCGTTT
GAATAACAGTGACATCGATGGTGCAACCGGCGTACAGGTTCGTCTATTAGACAAAAATAGTGCACCTATTGTGGTGGGTT
CTGGCAACCAAGGTAATGTCGTAGAAGATATTTCTGGTGATGGCGCGACATTAAGCTATTATGCACAATATTATGCAAAT
GAAGCGAATGTCGAAGCAGGTTTGGTCGCGACGAATGTCGACTATACTATCGTTTATGATTAA

Upstream 100 bases:

>100_bases
GTAATAATAGATTAATCGAAATCGAACCACACTAACTGATTATATTAATTCCGCTCAGTTTATTAATATAAAACCTTGCT
ATTAAATACAGGAAATAAAC

Downstream 100 bases:

>100_bases
TGCTTGTTTATGATTAATACTTGTTCATGATTAATGCTTATTTATGATTAACACTTGTTCATGATTAACTAACGCGGATA
GCAAGTCCAATCCGGCATAA

Product: putative fimbrial protein

Products: NA

Alternate protein names: F17 fimbrial adhesive antigen; F17 pilin [H]

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKIKSSNVLIAAFAGLFIAQSAFAADGTITINGKITDTTCGISVNNGTKDGTVTLPVVSASALDGINSVAGTTPFNIVLT
GCTGATMGNAYAHFEQGTTVEASTGRLNNSDIDGATGVQVRLLDKNSAPIVVGSGNQGNVVEDISGDGATLSYYAQYYAN
EANVEAGLVATNVDYTIVYD

Sequences:

>Translated_180_residues
MKIKSSNVLIAAFAGLFIAQSAFAADGTITINGKITDTTCGISVNNGTKDGTVTLPVVSASALDGINSVAGTTPFNIVLT
GCTGATMGNAYAHFEQGTTVEASTGRLNNSDIDGATGVQVRLLDKNSAPIVVGSGNQGNVVEDISGDGATLSYYAQYYAN
EANVEAGLVATNVDYTIVYD
>Mature_180_residues
MKIKSSNVLIAAFAGLFIAQSAFAADGTITINGKITDTTCGISVNNGTKDGTVTLPVVSASALDGINSVAGTTPFNIVLT
GCTGATMGNAYAHFEQGTTVEASTGRLNNSDIDGATGVQVRLLDKNSAPIVVGSGNQGNVVEDISGDGATLSYYAQYYAN
EANVEAGLVATNVDYTIVYD

Specific function: Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs [H]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18313; Mature: 18313

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKSSNVLIAAFAGLFIAQSAFAADGTITINGKITDTTCGISVNNGTKDGTVTLPVVSA
CEECCCCEEEEEHHHHHHHHHCCCCCCEEEECCEEECEEEEEEECCCCCCCEEEEEEEEC
SALDGINSVAGTTPFNIVLTGCTGATMGNAYAHFEQGTTVEASTGRLNNSDIDGATGVQV
CHHCCCCHHCCCCCEEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCEEE
RLLDKNSAPIVVGSGNQGNVVEDISGDGATLSYYAQYYANEANVEAGLVATNVDYTIVYD
EEEECCCCCEEEECCCCCCEEEECCCCCCEEEEEEEECCCCCCCEEEEEEECCEEEEEEC
>Mature Secondary Structure
MKIKSSNVLIAAFAGLFIAQSAFAADGTITINGKITDTTCGISVNNGTKDGTVTLPVVSA
CEECCCCEEEEEHHHHHHHHHCCCCCCEEEECCEEECEEEEEEECCCCCCCEEEEEEEEC
SALDGINSVAGTTPFNIVLTGCTGATMGNAYAHFEQGTTVEASTGRLNNSDIDGATGVQV
CHHCCCCHHCCCCCEEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCEEE
RLLDKNSAPIVVGSGNQGNVVEDISGDGATLSYYAQYYANEANVEAGLVATNVDYTIVYD
EEEECCCCCEEEECCCCCCEEEECCCCCCEEEEEEEECCCCCCCEEEEEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2897333 [H]