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The map label for this gene is flhC [H]

Identifier: 218928795

GI number: 218928795

Start: 1892772

End: 1893356

Strand: Direct

Name: flhC [H]

Synonym: YPO1663

Alternate gene names: 218928795

Gene position: 1892772-1893356 (Clockwise)

Preceding gene: 218928794

Following gene: 218928796

Centisome position: 40.67

GC content: 48.03

Gene sequence:

>585_bases
TTGATGGTTGAGAAAAGTATTGTCCAGGAAGCTAAAGACATACATTTGGCAATGGAACTGATCACGTTGGGTGCTCGTCT
ACAGATGCTTGAAAGTGAAACACAGCTTAGCCGAGGCCGTTTAATCAAGCTCTACAAAGAGCTTAGAGGCAGCCCTCCCC
CTAAAGGGATGTTGCCGTTTTCGACCGATTGGTTTATGACTTGGGAACAGAATATTCATTCGTCGATGTTTTATAACGCT
TACAGTTTCTTGCTTAAAAGTGGCTATTGCACGGGTGTTGAAGCGGTGATTAGAGCGTATCGGCTTTACCTCGAACAGTG
TCCCGATCTGCCTGAAGTCCCGCCATTACTGGCGTTGACCCGAGCCTGGACGCTGGTCCGTTTCGTTGACAGTGGCATGT
TGCAGCTTTCCAGATGCAATTGCTGTGGGGGGACATTTATCACCCATGCCCATCAACCACTAAACAGTTTTGTCTGCAGT
CTTTGCCAGCCTCCTTCCCGCGCAGTAAAAAAACGTAAACTTTCTCCGCAGTCTGCCGATATAACTTCACAACTGCTGGA
TGAGCAGGTTAGACGCGCAGTTTGA

Upstream 100 bases:

>100_bases
GGATGACCTGCAACAAATCCATACCGGAATTCTCTTGTCGAGTCACTTACTCCACGAGCTATCGTTAAAAGACGATAGTA
CGCCTAAAAAAAGAGCATGA

Downstream 100 bases:

>100_bases
GTTTCATAAAATTGTCAGACATTCATGCCCAAAATTATTGGCGTTACAGATAGGTTGCTAACATCACTGTAACGTCAAGT
TAGCAGGGGGTAGGTTACAG

Product: transcriptional activator FlhC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MMVEKSIVQEAKDIHLAMELITLGARLQMLESETQLSRGRLIKLYKELRGSPPPKGMLPFSTDWFMTWEQNIHSSMFYNA
YSFLLKSGYCTGVEAVIRAYRLYLEQCPDLPEVPPLLALTRAWTLVRFVDSGMLQLSRCNCCGGTFITHAHQPLNSFVCS
LCQPPSRAVKKRKLSPQSADITSQLLDEQVRRAV

Sequences:

>Translated_194_residues
MMVEKSIVQEAKDIHLAMELITLGARLQMLESETQLSRGRLIKLYKELRGSPPPKGMLPFSTDWFMTWEQNIHSSMFYNA
YSFLLKSGYCTGVEAVIRAYRLYLEQCPDLPEVPPLLALTRAWTLVRFVDSGMLQLSRCNCCGGTFITHAHQPLNSFVCS
LCQPPSRAVKKRKLSPQSADITSQLLDEQVRRAV
>Mature_194_residues
MMVEKSIVQEAKDIHLAMELITLGARLQMLESETQLSRGRLIKLYKELRGSPPPKGMLPFSTDWFMTWEQNIHSSMFYNA
YSFLLKSGYCTGVEAVIRAYRLYLEQCPDLPEVPPLLALTRAWTLVRFVDSGMLQLSRCNCCGGTFITHAHQPLNSFVCS
LCQPPSRAVKKRKLSPQSADITSQLLDEQVRRAV

Specific function: Transcriptional activator. Together with flhD it acts as a compound sigma factor that activates class 2 flagellar genes (Probable). Is required for flagellin production, swimming motility, and swarming motility [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flhC family [H]

Homologues:

Organism=Escherichia coli, GI1788201, Length=193, Percent_Identity=82.3834196891192, Blast_Score=329, Evalue=7e-92,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007944
- ProDom:   PD016592 [H]

Pfam domain/function: PF05280 FlhC [H]

EC number: NA

Molecular weight: Translated: 22028; Mature: 22028

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVEKSIVQEAKDIHLAMELITLGARLQMLESETQLSRGRLIKLYKELRGSPPPKGMLPF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
STDWFMTWEQNIHSSMFYNAYSFLLKSGYCTGVEAVIRAYRLYLEQCPDLPEVPPLLALT
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
RAWTLVRFVDSGMLQLSRCNCCGGTFITHAHQPLNSFVCSLCQPPSRAVKKRKLSPQSAD
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHCCCHHHHHHHHCCCCCHHH
ITSQLLDEQVRRAV
HHHHHHHHHHHHCC
>Mature Secondary Structure
MMVEKSIVQEAKDIHLAMELITLGARLQMLESETQLSRGRLIKLYKELRGSPPPKGMLPF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
STDWFMTWEQNIHSSMFYNAYSFLLKSGYCTGVEAVIRAYRLYLEQCPDLPEVPPLLALT
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
RAWTLVRFVDSGMLQLSRCNCCGGTFITHAHQPLNSFVCSLCQPPSRAVKKRKLSPQSAD
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHCCCHHHHHHHHCCCCCHHH
ITSQLLDEQVRRAV
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10217774 [H]